RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 LIG1P18858 919 aa17.83■□□□□ 0.44
PDE1B-207ENST00000550620 BLOC1S2Q6QNY1 142 aa17.83■□□□□ 0.44
PDE1B-207ENST00000550620 SPATA32Q96LK8 384 aa17.83■□□□□ 0.44
PDE1B-207ENST00000550620 SYCP1Q15431 976 aa17.82■□□□□ 0.44
PDE1B-207ENST00000550620 CAMK4Q16566 473 aa17.82■□□□□ 0.44
PDE1B-207ENST00000550620 DRC7Q8IY82 874 aa17.82■□□□□ 0.44
PDE1B-207ENST00000550620 SNRKQ9NRH2 765 aa17.82■□□□□ 0.44
PDE1B-207ENST00000550620 C9orf78Q9NZ63 289 aaPredicted RBP17.82■□□□□ 0.44
PDE1B-207ENST00000550620 AMOTL2Q9Y2J4 779 aa17.82■□□□□ 0.44
PDE1B-207ENST00000550620 FAM177BA6PVY3 158 aa17.81■□□□□ 0.44
PDE1B-207ENST00000550620 SLC27A2O14975 620 aa17.81■□□□□ 0.44
PDE1B-207ENST00000550620 LTKP29376 864 aa17.81■□□□□ 0.44
PDE1B-207ENST00000550620 ANO6Q4KMQ2 910 aa17.81■□□□□ 0.44
PDE1B-207ENST00000550620 AACSQ86V21 672 aa17.81■□□□□ 0.44
PDE1B-207ENST00000550620 LUZP1Q86V48 1076 aa17.81■□□□□ 0.44
PDE1B-207ENST00000550620 LTV1Q96GA3 475 aaPredicted RBP17.81■□□□□ 0.44
PDE1B-207ENST00000550620 CBX8Q9HC52 389 aa17.81■□□□□ 0.44
PDE1B-207ENST00000550620 DACT1Q9NYF0 836 aa17.81■□□□□ 0.44
PDE1B-207ENST00000550620 DIP2AQ14689 1571 aa17.81■□□□□ 0.44
PDE1B-207ENST00000550620 MED1Q15648 1581 aaPredicted RBP17.81■□□□□ 0.44
PDE1B-207ENST00000550620 ADCY9O60503 1353 aa17.81■□□□□ 0.44
PDE1B-207ENST00000550620 CAVIN2O95810 425 aa17.81■□□□□ 0.44
PDE1B-207ENST00000550620 RBM43Q6ZSC3 357 aaKnown RBP17.81■□□□□ 0.44
PDE1B-207ENST00000550620 FERMT3Q86UX7 667 aa17.81■□□□□ 0.44
PDE1B-207ENST00000550620 CLSTN2Q9H4D0 955 aa17.81■□□□□ 0.44
PDE1B-207ENST00000550620 CHMP3Q9Y3E7 222 aa17.81■□□□□ 0.44
PDE1B-207ENST00000550620 CHD2O14647 1828 aaKnown RBP17.81■□□□□ 0.44
PDE1B-207ENST00000550620 NMIQ13287 307 aaPredicted RBP17.8■□□□□ 0.44
PDE1B-207ENST00000550620 CCDC186Q7Z3E2 898 aa17.8■□□□□ 0.44
PDE1B-207ENST00000550620 TDRD7Q8NHU6 1098 aaKnown RBP17.8■□□□□ 0.44
PDE1B-207ENST00000550620 SLC26A8Q96RN1 970 aa17.8■□□□□ 0.44
PDE1B-207ENST00000550620 DBF4Q9UBU7 674 aaPredicted RBP17.8■□□□□ 0.44
PDE1B-207ENST00000550620 EID1Q9Y6B2 187 aa17.8■□□□□ 0.44
PDE1B-207ENST00000550620 SMTNL1A8MU46 457 aa17.8■□□□□ 0.44
PDE1B-207ENST00000550620 RPS6KB1P23443 525 aa17.8■□□□□ 0.44
PDE1B-207ENST00000550620 ZNF75DP51815 510 aa17.8■□□□□ 0.44
PDE1B-207ENST00000550620 ATP2B3Q16720 1220 aa17.8■□□□□ 0.44
PDE1B-207ENST00000550620 PLA2G4DQ86XP0 818 aa17.8■□□□□ 0.44
PDE1B-207ENST00000550620 TRIM5Q9C035 493 aa17.8■□□□□ 0.44
PDE1B-207ENST00000550620 HMG20BQ9P0W2 317 aa17.8■□□□□ 0.44
PDE1B-207ENST00000550620 ANKARQ7Z5J8 1434 aa17.8■□□□□ 0.44
PDE1B-207ENST00000550620 CKAP2LQ8IYA6 745 aa17.79■□□□□ 0.44
PDE1B-207ENST00000550620 FEZ1Q99689 392 aa17.79■□□□□ 0.44
PDE1B-207ENST00000550620 CYB5RLQ6IPT4 315 aa17.79■□□□□ 0.44
PDE1B-207ENST00000550620 DDX54Q8TDD1 881 aaKnown RBP17.79■□□□□ 0.44
PDE1B-207ENST00000550620 LEO1Q8WVC0 666 aaPredicted RBP17.79■□□□□ 0.44
PDE1B-207ENST00000550620 PAXBP1Q9Y5B6 917 aa17.79■□□□□ 0.44
PDE1B-207ENST00000550620 TEFQ10587 303 aa17.78■□□□□ 0.44
PDE1B-207ENST00000550620 FAM227BQ96M60 508 aa17.78■□□□□ 0.44
PDE1B-207ENST00000550620 TSPOAP1O95153 1857 aa17.78■□□□□ 0.44
PDE1B-207ENST00000550620 BTBD11A6QL63 1104 aa17.77■□□□□ 0.44
PDE1B-207ENST00000550620 DTNBO60941 627 aa17.77■□□□□ 0.44
PDE1B-207ENST00000550620 G3BP1Q13283 466 aaKnown RBP eCLIP17.77■□□□□ 0.44
PDE1B-207ENST00000550620 PLPPR3Q6T4P5 718 aa17.77■□□□□ 0.44
PDE1B-207ENST00000550620 BICD2Q8TD16 824 aa17.77■□□□□ 0.44
PDE1B-207ENST00000550620 MAP3K2Q9Y2U5 619 aa17.77■□□□□ 0.44
PDE1B-207ENST00000550620 USP54Q70EL1 1684 aa17.77■□□□□ 0.43
PDE1B-207ENST00000550620 GIGYF1O75420 1035 aaPredicted RBP17.77■□□□□ 0.43
PDE1B-207ENST00000550620 CDC25BP30305 580 aa17.77■□□□□ 0.43
PDE1B-207ENST00000550620 ZSCAN25Q6NSZ9 544 aa17.77■□□□□ 0.43
PDE1B-207ENST00000550620 FAM173BQ6P4H8 233 aa17.77■□□□□ 0.43
PDE1B-207ENST00000550620 USHBP1Q8N6Y0 703 aa17.77■□□□□ 0.43
PDE1B-207ENST00000550620 ABTB2Q8N961 1025 aa17.77■□□□□ 0.43
PDE1B-207ENST00000550620 PA2G4Q9UQ80 394 aaKnown RBP17.77■□□□□ 0.43
PDE1B-207ENST00000550620 TBX22Q9Y458 520 aa17.77■□□□□ 0.43
PDE1B-207ENST00000550620 KIF20AO95235 890 aa17.76■□□□□ 0.43
PDE1B-207ENST00000550620 ZNF165P49910 485 aa17.76■□□□□ 0.43
PDE1B-207ENST00000550620 KRT32Q14532 448 aa17.76■□□□□ 0.43
PDE1B-207ENST00000550620 NUTM2GQ5VZR2 741 aa17.76■□□□□ 0.43
PDE1B-207ENST00000550620 LARP1Q6PKG0 1096 aaKnown RBP17.76■□□□□ 0.43
PDE1B-207ENST00000550620 KSR2Q6VAB6 950 aa17.76■□□□□ 0.43
PDE1B-207ENST00000550620 FSD1Q9BTV5 496 aa17.76■□□□□ 0.43
PDE1B-207ENST00000550620 KDM3BQ7LBC6 1761 aa17.76■□□□□ 0.43
PDE1B-207ENST00000550620 TNNT1P13805 278 aa17.76■□□□□ 0.43
PDE1B-207ENST00000550620 TSGA10IPQ3SY00 556 aa17.76■□□□□ 0.43
PDE1B-207ENST00000550620 LGR6Q9HBX8 967 aa17.76■□□□□ 0.43
PDE1B-207ENST00000550620 ZHX1Q9UKY1 873 aaPredicted RBP17.76■□□□□ 0.43
PDE1B-207ENST00000550620 MED23Q9ULK4 1368 aa17.75■□□□□ 0.43
PDE1B-207ENST00000550620 TOB2Q14106 344 aaPredicted RBP17.75■□□□□ 0.43
PDE1B-207ENST00000550620 C16orf45Q96MC5 204 aaPredicted RBP17.75■□□□□ 0.43
PDE1B-207ENST00000550620 TFIP11Q9UBB9 837 aaKnown RBP17.75■□□□□ 0.43
PDE1B-207ENST00000550620 CLIP2Q9UDT6 1046 aa17.75■□□□□ 0.43
PDE1B-207ENST00000550620 NPHP4O75161 1426 aaPredicted RBP17.75■□□□□ 0.43
PDE1B-207ENST00000550620 SLIT1O75093 1534 aa17.75■□□□□ 0.43
PDE1B-207ENST00000550620 ANXA1P04083 346 aa17.74■□□□□ 0.43
PDE1B-207ENST00000550620 U2AF2P26368 475 aaKnown RBP eCLIP17.74■□□□□ 0.43
PDE1B-207ENST00000550620 AKAP4Q5JQC9 854 aa17.74■□□□□ 0.43
PDE1B-207ENST00000550620 ZSCAN16Q9H4T2 348 aaPredicted RBP17.74■□□□□ 0.43
PDE1B-207ENST00000550620 JCADQ9P266 1359 aa17.74■□□□□ 0.43
PDE1B-207ENST00000550620 A0A0D9SFI3 127 aa17.74■□□□□ 0.43
PDE1B-207ENST00000550620 NEMFO60524 1076 aa17.74■□□□□ 0.43
PDE1B-207ENST00000550620 NCBP1Q09161 790 aaKnown RBP17.74■□□□□ 0.43
PDE1B-207ENST00000550620 LRMPQ12912 555 aa17.74■□□□□ 0.43
PDE1B-207ENST00000550620 EAF2Q96CJ1 260 aaPredicted RBP17.74■□□□□ 0.43
PDE1B-207ENST00000550620 CGNQ9P2M7 1197 aaKnown RBP17.74■□□□□ 0.43
PDE1B-207ENST00000550620 CFAP45Q9UL16 551 aa17.74■□□□□ 0.43
PDE1B-207ENST00000550620 SPDYE4A6NLX3 237 aa17.73■□□□□ 0.43
PDE1B-207ENST00000550620 GOLGA6L19H0YKK7 550 aa17.73■□□□□ 0.43
PDE1B-207ENST00000550620 NR1I2O75469 434 aa17.73■□□□□ 0.43
PDE1B-207ENST00000550620 CCDC112Q8NEF3 446 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms