RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 RIC3Q7Z5B4 369 aa17.48■□□□□ 0.39
LETMD1-209ENST00000547318 BICC1Q9H694 974 aaKnown RBP17.48■□□□□ 0.39
LETMD1-209ENST00000547318 MED23Q9ULK4 1368 aa17.47■□□□□ 0.39
LETMD1-209ENST00000547318 RRP9O43818 475 aaKnown RBP17.47■□□□□ 0.39
LETMD1-209ENST00000547318 SASH1O94885 1247 aa17.47■□□□□ 0.39
LETMD1-209ENST00000547318 TATP17735 454 aaPredicted RBP17.47■□□□□ 0.39
LETMD1-209ENST00000547318 KRT32Q14532 448 aa17.47■□□□□ 0.39
LETMD1-209ENST00000547318 CWF19L2Q2TBE0 894 aaKnown RBP17.47■□□□□ 0.39
LETMD1-209ENST00000547318 PRPF40BQ6NWY9 871 aaKnown RBP17.47■□□□□ 0.39
LETMD1-209ENST00000547318 METTL22Q9BUU2 404 aaPredicted RBP17.47■□□□□ 0.39
LETMD1-209ENST00000547318 RGPD5Q99666 1765 aa17.47■□□□□ 0.39
LETMD1-209ENST00000547318 NEURL1BA8MQ27 555 aa17.47■□□□□ 0.39
LETMD1-209ENST00000547318 PTH1RQ03431 593 aa17.47■□□□□ 0.39
LETMD1-209ENST00000547318 CREB3L3Q68CJ9 461 aa17.47■□□□□ 0.39
LETMD1-209ENST00000547318 KAZALD1Q96I82 304 aa17.47■□□□□ 0.39
LETMD1-209ENST00000547318 ORAI2Q96SN7 254 aa17.47■□□□□ 0.39
LETMD1-209ENST00000547318 COPRSQ9NQ92 184 aa17.47■□□□□ 0.39
LETMD1-209ENST00000547318 RBM8AQ9Y5S9 174 aaKnown RBP17.47■□□□□ 0.39
LETMD1-209ENST00000547318 KDM6AO15550 1401 aaPredicted RBP17.46■□□□□ 0.39
LETMD1-209ENST00000547318 C19orf44Q9H6X5 657 aa17.46■□□□□ 0.39
LETMD1-209ENST00000547318 GJB2P29033 226 aa17.45■□□□□ 0.38
LETMD1-209ENST00000547318 KCNJ4P48050 445 aa17.45■□□□□ 0.38
LETMD1-209ENST00000547318 GCKRQ14397 625 aa17.45■□□□□ 0.38
LETMD1-209ENST00000547318 IFNL2Q8IZJ0 200 aa17.45■□□□□ 0.38
LETMD1-209ENST00000547318 EAF2Q96CJ1 260 aaPredicted RBP17.45■□□□□ 0.38
LETMD1-209ENST00000547318 PA2G4Q9UQ80 394 aaKnown RBP17.45■□□□□ 0.38
LETMD1-209ENST00000547318 COL18A1P39060 1754 aa17.45■□□□□ 0.38
LETMD1-209ENST00000547318 IGKV5-2P06315 115 aa17.45■□□□□ 0.38
LETMD1-209ENST00000547318 PHKG2P15735 406 aa17.45■□□□□ 0.38
LETMD1-209ENST00000547318 ELP1O95163 1332 aa17.44■□□□□ 0.38
LETMD1-209ENST00000547318 SNRPA1P09661 255 aaKnown RBP17.44■□□□□ 0.38
LETMD1-209ENST00000547318 MTMR6Q9Y217 621 aa17.44■□□□□ 0.38
LETMD1-209ENST00000547318 SLC27A2O14975 620 aa17.43■□□□□ 0.38
LETMD1-209ENST00000547318 GADD45BO75293 160 aaPredicted RBP17.43■□□□□ 0.38
LETMD1-209ENST00000547318 ATP5JP18859 108 aa17.43■□□□□ 0.38
LETMD1-209ENST00000547318 NMIQ13287 307 aaPredicted RBP17.43■□□□□ 0.38
LETMD1-209ENST00000547318 RABL6Q3YEC7 729 aaPredicted RBP17.43■□□□□ 0.38
LETMD1-209ENST00000547318 BLOC1S2Q6QNY1 142 aa17.43■□□□□ 0.38
LETMD1-209ENST00000547318 DCAF5Q96JK2 942 aa17.43■□□□□ 0.38
LETMD1-209ENST00000547318 FSD1Q9BTV5 496 aa17.43■□□□□ 0.38
LETMD1-209ENST00000547318 CNPY2Q9Y2B0 182 aa17.43■□□□□ 0.38
LETMD1-209ENST00000547318 AXIN2Q9Y2T1 843 aa17.43■□□□□ 0.38
LETMD1-209ENST00000547318 USPL1Q5W0Q7 1092 aa17.43■□□□□ 0.38
LETMD1-209ENST00000547318 CCDC83Q8IWF9 413 aa17.43■□□□□ 0.38
LETMD1-209ENST00000547318 AFDNP55196 1824 aaKnown RBP17.42■□□□□ 0.38
LETMD1-209ENST00000547318 CHAMP1Q96JM3 812 aa17.42■□□□□ 0.38
LETMD1-209ENST00000547318 ARFGEF2Q9Y6D5 1785 aa17.42■□□□□ 0.38
LETMD1-209ENST00000547318 ADCK5Q3MIX3 580 aa17.42■□□□□ 0.38
LETMD1-209ENST00000547318 ANKRD13DQ6ZTN6 518 aa17.42■□□□□ 0.38
LETMD1-209ENST00000547318 PROSER2Q86WR7 435 aaPredicted RBP17.42■□□□□ 0.38
LETMD1-209ENST00000547318 TTC5Q8N0Z6 440 aa17.42■□□□□ 0.38
LETMD1-209ENST00000547318 FMNL2Q96PY5 1086 aa17.42■□□□□ 0.38
LETMD1-209ENST00000547318 RPS6KB1P23443 525 aa17.41■□□□□ 0.38
LETMD1-209ENST00000547318 KRT85P78386 507 aa17.41■□□□□ 0.38
LETMD1-209ENST00000547318 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.41■□□□□ 0.38
LETMD1-209ENST00000547318 TCHHQ07283 1943 aa17.41■□□□□ 0.38
LETMD1-209ENST00000547318 TPM3P06753 285 aa17.4■□□□□ 0.38
LETMD1-209ENST00000547318 ME3Q16798 604 aa17.4■□□□□ 0.38
LETMD1-209ENST00000547318 LMOD2Q6P5Q4 547 aa17.4■□□□□ 0.38
LETMD1-209ENST00000547318 XAGE3Q8WTP9 111 aa17.4■□□□□ 0.38
LETMD1-209ENST00000547318 GDPD2Q9HCC8 539 aa17.4■□□□□ 0.38
LETMD1-209ENST00000547318 PRAMEF22A3QJZ6 481 aa17.4■□□□□ 0.38
LETMD1-209ENST00000547318 LARGE1O95461 756 aa17.4■□□□□ 0.38
LETMD1-209ENST00000547318 PTMAP06454 111 aaKnown RBP17.4■□□□□ 0.38
LETMD1-209ENST00000547318 AIMP1Q12904 312 aaKnown RBP17.4■□□□□ 0.38
LETMD1-209ENST00000547318 CHMP4CQ96CF2 233 aa17.4■□□□□ 0.38
LETMD1-209ENST00000547318 U3KPZ7 1027 aaPredicted RBP17.4■□□□□ 0.38
LETMD1-209ENST00000547318 MEGF6O75095 1541 aa17.39■□□□□ 0.37
LETMD1-209ENST00000547318 TMEM94Q12767 1356 aa17.39■□□□□ 0.37
LETMD1-209ENST00000547318 COPS6Q7L5N1 327 aa17.39■□□□□ 0.37
LETMD1-209ENST00000547318 LRP10Q7Z4F1 713 aa17.39■□□□□ 0.37
LETMD1-209ENST00000547318 FAM227BQ96M60 508 aa17.39■□□□□ 0.37
LETMD1-209ENST00000547318 SCAND2PQ9GZW5 306 aaPredicted RBP17.39■□□□□ 0.37
LETMD1-209ENST00000547318 CCDC8Q9H0W5 538 aaPredicted RBP17.39■□□□□ 0.37
LETMD1-209ENST00000547318 SPEF2Q9C093 1822 aa17.39■□□□□ 0.37
LETMD1-209ENST00000547318 CPDO75976 1380 aa17.39■□□□□ 0.37
LETMD1-209ENST00000547318 KIAA2012Q0VF49 1180 aa17.38■□□□□ 0.37
LETMD1-209ENST00000547318 RNF214Q8ND24 703 aa17.38■□□□□ 0.37
LETMD1-209ENST00000547318 RBM33Q96EV2 1170 aaKnown RBP17.38■□□□□ 0.37
LETMD1-209ENST00000547318 MYD88Q99836 296 aa17.38■□□□□ 0.37
LETMD1-209ENST00000547318 GPR108Q9NPR9 543 aa17.38■□□□□ 0.37
LETMD1-209ENST00000547318 RFX5P48382 616 aaPredicted RBP17.38■□□□□ 0.37
LETMD1-209ENST00000547318 TNNI3KQ59H18 835 aa17.38■□□□□ 0.37
LETMD1-209ENST00000547318 LARP1BQ659C4 914 aaKnown RBP17.38■□□□□ 0.37
LETMD1-209ENST00000547318 FUCA2Q9BTY2 467 aa17.38■□□□□ 0.37
LETMD1-209ENST00000547318 NLRP2Q9NX02 1062 aa17.38■□□□□ 0.37
LETMD1-209ENST00000547318 TPCN1Q9ULQ1 816 aa17.38■□□□□ 0.37
LETMD1-209ENST00000547318 FPGT-TNNI3KV9GXZ4 949 aa17.38■□□□□ 0.37
LETMD1-209ENST00000547318 TNS3Q68CZ2 1445 aa17.37■□□□□ 0.37
LETMD1-209ENST00000547318 A0A0D9SFI3 127 aa17.37■□□□□ 0.37
LETMD1-209ENST00000547318 FIBPO43427 364 aa17.37■□□□□ 0.37
LETMD1-209ENST00000547318 HMGB1P09429 215 aaKnown RBP17.37■□□□□ 0.37
LETMD1-209ENST00000547318 GLIPR1L2Q4G1C9 344 aa17.37■□□□□ 0.37
LETMD1-209ENST00000547318 PLBD2Q8NHP8 589 aa17.37■□□□□ 0.37
LETMD1-209ENST00000547318 BOLA2Q9H3K6 86 aa17.37■□□□□ 0.37
LETMD1-209ENST00000547318 GLI3P10071 1580 aa17.37■□□□□ 0.37
LETMD1-209ENST00000547318 TAF5LO75529 589 aa17.37■□□□□ 0.37
LETMD1-209ENST00000547318 XPCQ01831 940 aaPredicted RBP17.37■□□□□ 0.37
LETMD1-209ENST00000547318 NFATC2IPQ8NCF5 419 aa17.37■□□□□ 0.37
LETMD1-209ENST00000547318 PALLDQ8WX93 1383 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 347.6 ms