RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 ITPRIPQ8IWB1 547 aa16.42■□□□□ 0.22
CDCA3-210ENST00000545368 TMEM57Q8N5G2 664 aa16.42■□□□□ 0.22
CDCA3-210ENST00000545368 NYXQ9GZU5 481 aa16.42■□□□□ 0.22
CDCA3-210ENST00000545368 PARP3Q9Y6F1 533 aa16.42■□□□□ 0.22
CDCA3-210ENST00000545368 POLD1P28340 1107 aa16.41■□□□□ 0.22
CDCA3-210ENST00000545368 TM4SF1P30408 202 aa16.41■□□□□ 0.22
CDCA3-210ENST00000545368 NBPF5PQ86XG9 351 aaPredicted RBP16.41■□□□□ 0.22
CDCA3-210ENST00000545368 PANK1Q8TE04 598 aa16.41■□□□□ 0.22
CDCA3-210ENST00000545368 FAM177BA6PVY3 158 aa16.4■□□□□ 0.22
CDCA3-210ENST00000545368 POLRMTO00411 1230 aaKnown RBP16.4■□□□□ 0.22
CDCA3-210ENST00000545368 RLBP1P12271 317 aa16.4■□□□□ 0.22
CDCA3-210ENST00000545368 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
CDCA3-210ENST00000545368 GCKRQ14397 625 aa16.4■□□□□ 0.22
CDCA3-210ENST00000545368 SUSD4Q5VX71 490 aa16.4■□□□□ 0.22
CDCA3-210ENST00000545368 UTP14AQ9BVJ6 771 aaKnown RBP16.4■□□□□ 0.22
CDCA3-210ENST00000545368 SERPINB2P05120 415 aa16.39■□□□□ 0.21
CDCA3-210ENST00000545368 DDR1Q08345 913 aa16.39■□□□□ 0.21
CDCA3-210ENST00000545368 MVPQ14764 893 aaKnown RBP16.39■□□□□ 0.21
CDCA3-210ENST00000545368 C20orf194Q5TEA3 1177 aa16.39■□□□□ 0.21
CDCA3-210ENST00000545368 TPTE2Q6XPS3 522 aa16.39■□□□□ 0.21
CDCA3-210ENST00000545368 CNBD1Q8NA66 436 aa16.39■□□□□ 0.21
CDCA3-210ENST00000545368 C9orf78Q9NZ63 289 aaPredicted RBP16.39■□□□□ 0.21
CDCA3-210ENST00000545368 TRMT112Q9UI30 125 aaKnown RBP16.39■□□□□ 0.21
CDCA3-210ENST00000545368 ATF5Q9Y2D1 282 aaPredicted RBP16.39■□□□□ 0.21
CDCA3-210ENST00000545368 NRXN2Q9P2S2 1712 aa16.39■□□□□ 0.21
CDCA3-210ENST00000545368 NTSR2O95665 410 aa16.38■□□□□ 0.21
CDCA3-210ENST00000545368 PCCAP05165 728 aaPredicted RBP16.38■□□□□ 0.21
CDCA3-210ENST00000545368 ZBTB38Q8NAP3 1195 aaPredicted RBP16.38■□□□□ 0.21
CDCA3-210ENST00000545368 CHMP4BQ9H444 224 aaKnown RBP16.38■□□□□ 0.21
CDCA3-210ENST00000545368 DDX19BQ9UMR2 479 aa16.38■□□□□ 0.21
CDCA3-210ENST00000545368 COG6Q9Y2V7 657 aa16.38■□□□□ 0.21
CDCA3-210ENST00000545368 SH3TC1Q8TE82 1336 aa16.38■□□□□ 0.21
CDCA3-210ENST00000545368 LAMB2P55268 1798 aa16.37■□□□□ 0.21
CDCA3-210ENST00000545368 GRM8O00222 908 aa16.37■□□□□ 0.21
CDCA3-210ENST00000545368 ST5P78524 1137 aa16.37■□□□□ 0.21
CDCA3-210ENST00000545368 SPON1Q9HCB6 807 aa16.37■□□□□ 0.21
CDCA3-210ENST00000545368 GNAI3P08754 354 aa16.36■□□□□ 0.21
CDCA3-210ENST00000545368 HSP90B1P14625 803 aaKnown RBP16.36■□□□□ 0.21
CDCA3-210ENST00000545368 UBE3BQ7Z3V4 1068 aa16.36■□□□□ 0.21
CDCA3-210ENST00000545368 HDAC5Q9UQL6 1122 aa16.36■□□□□ 0.21
CDCA3-210ENST00000545368 H7C1W4 665 aa16.35■□□□□ 0.21
CDCA3-210ENST00000545368 UBTFL1P0CB47 393 aaPredicted RBP16.35■□□□□ 0.21
CDCA3-210ENST00000545368 RTL5Q5HYW3 569 aaPredicted RBP16.35■□□□□ 0.21
CDCA3-210ENST00000545368 PRR5LQ6MZQ0 368 aa16.35■□□□□ 0.21
CDCA3-210ENST00000545368 NUTM1Q86Y26 1132 aa16.35■□□□□ 0.21
CDCA3-210ENST00000545368 FAM89AQ96GI7 184 aa16.35■□□□□ 0.21
CDCA3-210ENST00000545368 CDHR2Q9BYE9 1310 aa16.35■□□□□ 0.21
CDCA3-210ENST00000545368 DDX60Q8IY21 1712 aaKnown RBP16.34■□□□□ 0.21
CDCA3-210ENST00000545368 NEFLP07196 543 aa16.34■□□□□ 0.21
CDCA3-210ENST00000545368 ERFEQ4G0M1 354 aa16.34■□□□□ 0.21
CDCA3-210ENST00000545368 USP44Q9H0E7 712 aa16.34■□□□□ 0.21
CDCA3-210ENST00000545368 UTYO14607 1347 aa16.34■□□□□ 0.21
CDCA3-210ENST00000545368 MYH3P11055 1940 aa16.33■□□□□ 0.21
CDCA3-210ENST00000545368 IRS4O14654 1257 aaPredicted RBP16.33■□□□□ 0.2
CDCA3-210ENST00000545368 CRBNQ96SW2 442 aa16.33■□□□□ 0.2
CDCA3-210ENST00000545368 MEIS3Q99687 375 aa16.33■□□□□ 0.2
CDCA3-210ENST00000545368 ABCC12Q96J65 1359 aa16.33■□□□□ 0.2
CDCA3-210ENST00000545368 RIC1Q4ADV7 1423 aa16.33■□□□□ 0.2
CDCA3-210ENST00000545368 NBPF7P0C2Y1 421 aaPredicted RBP16.32■□□□□ 0.2
CDCA3-210ENST00000545368 C10orf71Q711Q0 1435 aa16.32■□□□□ 0.2
CDCA3-210ENST00000545368 JARID2Q92833 1246 aaPredicted RBP16.32■□□□□ 0.2
CDCA3-210ENST00000545368 SGIP1Q9BQI5 828 aa16.32■□□□□ 0.2
CDCA3-210ENST00000545368 ZBTB7BO15156 539 aaPredicted RBP16.31■□□□□ 0.2
CDCA3-210ENST00000545368 PTGER2P43116 358 aa16.31■□□□□ 0.2
CDCA3-210ENST00000545368 CASP7P55210 303 aa16.31■□□□□ 0.2
CDCA3-210ENST00000545368 IRX6P78412 446 aaPredicted RBP16.31■□□□□ 0.2
CDCA3-210ENST00000545368 CCDC24Q8N4L8 307 aa16.31■□□□□ 0.2
CDCA3-210ENST00000545368 ANKRD31Q8N7Z5 1873 aa16.31■□□□□ 0.2
CDCA3-210ENST00000545368 TNRC6CQ9HCJ0 1690 aaKnown RBP16.3■□□□□ 0.2
CDCA3-210ENST00000545368 PDE8AO60658 829 aa16.3■□□□□ 0.2
CDCA3-210ENST00000545368 GNAI2P04899 355 aa16.3■□□□□ 0.2
CDCA3-210ENST00000545368 HCLS1P14317 486 aaPredicted RBP16.3■□□□□ 0.2
CDCA3-210ENST00000545368 SLC10A5Q5PT55 438 aa16.3■□□□□ 0.2
CDCA3-210ENST00000545368 SYNE4Q8N205 404 aa16.3■□□□□ 0.2
CDCA3-210ENST00000545368 SUCLG2Q96I99 432 aa16.3■□□□□ 0.2
CDCA3-210ENST00000545368 NLRP3Q96P20 1036 aa16.3■□□□□ 0.2
CDCA3-210ENST00000545368 BRIP1Q9BX63 1249 aa16.3■□□□□ 0.2
CDCA3-210ENST00000545368 KIF13BQ9NQT8 1826 aa16.3■□□□□ 0.2
CDCA3-210ENST00000545368 PDE6BP35913 854 aa16.29■□□□□ 0.2
CDCA3-210ENST00000545368 PLA2G12BQ9BX93 195 aa16.29■□□□□ 0.2
CDCA3-210ENST00000545368 LRP5O75197 1615 aa16.28■□□□□ 0.2
CDCA3-210ENST00000545368 CTSWP56202 376 aa16.28■□□□□ 0.2
CDCA3-210ENST00000545368 AAMPQ13685 434 aa16.28■□□□□ 0.2
CDCA3-210ENST00000545368 PPP1R1BQ9UD71 204 aaPredicted RBP16.28■□□□□ 0.2
CDCA3-210ENST00000545368 LRRFIP2Q9Y608 721 aaKnown RBP16.28■□□□□ 0.2
CDCA3-210ENST00000545368 KLHL34Q8N239 644 aa16.27■□□□□ 0.2
CDCA3-210ENST00000545368 BICC1Q9H694 974 aaKnown RBP16.27■□□□□ 0.2
CDCA3-210ENST00000545368 ZBTB40Q9NUA8 1239 aa16.27■□□□□ 0.2
CDCA3-210ENST00000545368 PDZRN3Q9UPQ7 1066 aa16.27■□□□□ 0.2
CDCA3-210ENST00000545368 CCDC152Q4G0S7 254 aa16.26■□□□□ 0.19
CDCA3-210ENST00000545368 EXOC6Q8TAG9 804 aa16.26■□□□□ 0.19
CDCA3-210ENST00000545368 C1orf115Q9H7X2 142 aa16.26■□□□□ 0.19
CDCA3-210ENST00000545368 CHMP3Q9Y3E7 222 aa16.26■□□□□ 0.19
CDCA3-210ENST00000545368 COL11A2P13942 1736 aaPredicted RBP16.25■□□□□ 0.19
CDCA3-210ENST00000545368 FOXO4P98177 505 aa16.25■□□□□ 0.19
CDCA3-210ENST00000545368 SF3B3Q15393 1217 aaKnown RBP16.25■□□□□ 0.19
CDCA3-210ENST00000545368 EPHA10Q5JZY3 1008 aa16.25■□□□□ 0.19
CDCA3-210ENST00000545368 RPGRQ92834 1020 aaKnown RBP16.25■□□□□ 0.19
CDCA3-210ENST00000545368 KAZALD1Q96I82 304 aa16.25■□□□□ 0.19
CDCA3-210ENST00000545368 DLEC1Q9Y238 1755 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms