RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 COG6Q9Y2V7 657 aa29.15■■■□□ 2.26
HOMER3-205ENST00000542541 CARMIL3Q8ND23 1372 aa29.15■■■□□ 2.26
HOMER3-205ENST00000542541 CHMP4BQ9H444 224 aaKnown RBP29.14■■■□□ 2.26
HOMER3-205ENST00000542541 C9orf78Q9NZ63 289 aaPredicted RBP29.14■■■□□ 2.26
HOMER3-205ENST00000542541 DDX19BQ9UMR2 479 aa29.14■■■□□ 2.26
HOMER3-205ENST00000542541 COL24A1Q17RW2 1714 aa29.14■■■□□ 2.25
HOMER3-205ENST00000542541 UTP14AQ9BVJ6 771 aaKnown RBP29.13■■■□□ 2.25
HOMER3-205ENST00000542541 NYXQ9GZU5 481 aa29.13■■■□□ 2.25
HOMER3-205ENST00000542541 SUSD4Q5VX71 490 aa29.12■■■□□ 2.25
HOMER3-205ENST00000542541 TPTE2Q6XPS3 522 aa29.12■■■□□ 2.25
HOMER3-205ENST00000542541 NBPF5PQ86XG9 351 aaPredicted RBP29.12■■■□□ 2.25
HOMER3-205ENST00000542541 TRMT112Q9UI30 125 aaKnown RBP29.12■■■□□ 2.25
HOMER3-205ENST00000542541 MMP10P09238 476 aa29.12■■■□□ 2.25
HOMER3-205ENST00000542541 PARP3Q9Y6F1 533 aa29.12■■■□□ 2.25
HOMER3-205ENST00000542541 ZBTB7AO95365 584 aa29.11■■■□□ 2.25
HOMER3-205ENST00000542541 GRM8O00222 908 aa29.1■■■□□ 2.25
HOMER3-205ENST00000542541 GTF2E1P29083 439 aaPredicted RBP29.1■■■□□ 2.25
HOMER3-205ENST00000542541 ZBTB38Q8NAP3 1195 aaPredicted RBP29.1■■■□□ 2.25
HOMER3-205ENST00000542541 ANKRD36CQ5JPF3 1778 aa29.1■■■□□ 2.25
HOMER3-205ENST00000542541 FAM177BA6PVY3 158 aa29.09■■■□□ 2.25
HOMER3-205ENST00000542541 POLRMTO00411 1230 aaKnown RBP29.09■■■□□ 2.25
HOMER3-205ENST00000542541 NPHP1O15259 732 aa29.09■■■□□ 2.25
HOMER3-205ENST00000542541 SERPINB2P05120 415 aa29.09■■■□□ 2.25
HOMER3-205ENST00000542541 PCCAP05165 728 aaPredicted RBP29.09■■■□□ 2.25
HOMER3-205ENST00000542541 USP44Q9H0E7 712 aa29.09■■■□□ 2.25
HOMER3-205ENST00000542541 HDAC5Q9UQL6 1122 aa29.09■■■□□ 2.25
HOMER3-205ENST00000542541 GNAI3P08754 354 aa29.09■■■□□ 2.25
HOMER3-205ENST00000542541 DDR1Q08345 913 aa29.09■■■□□ 2.25
HOMER3-205ENST00000542541 H7C1W4 665 aa29.08■■■□□ 2.25
HOMER3-205ENST00000542541 NTSR2O95665 410 aa29.08■■■□□ 2.25
HOMER3-205ENST00000542541 SH3TC1Q8TE82 1336 aa29.08■■■□□ 2.25
HOMER3-205ENST00000542541 ZBTB7BO15156 539 aaPredicted RBP29.07■■■□□ 2.24
HOMER3-205ENST00000542541 NEFLP07196 543 aa29.07■■■□□ 2.24
HOMER3-205ENST00000542541 HSP90B1P14625 803 aaKnown RBP29.07■■■□□ 2.24
HOMER3-205ENST00000542541 POLD1P28340 1107 aa29.07■■■□□ 2.24
HOMER3-205ENST00000542541 UBE3BQ7Z3V4 1068 aa29.06■■■□□ 2.24
HOMER3-205ENST00000542541 CNBD1Q8NA66 436 aa29.06■■■□□ 2.24
HOMER3-205ENST00000542541 FAM89AQ96GI7 184 aa29.06■■■□□ 2.24
HOMER3-205ENST00000542541 ATF5Q9Y2D1 282 aaPredicted RBP29.06■■■□□ 2.24
HOMER3-205ENST00000542541 UTYO14607 1347 aa29.06■■■□□ 2.24
HOMER3-205ENST00000542541 UBTFL1P0CB47 393 aaPredicted RBP29.05■■■□□ 2.24
HOMER3-205ENST00000542541 NBPF7P0C2Y1 421 aaPredicted RBP29.05■■■□□ 2.24
HOMER3-205ENST00000542541 CRBNQ96SW2 442 aa29.05■■■□□ 2.24
HOMER3-205ENST00000542541 MEIS3Q99687 375 aa29.05■■■□□ 2.24
HOMER3-205ENST00000542541 N4BP2Q86UW6 1770 aaPredicted RBP29.04■■■□□ 2.24
HOMER3-205ENST00000542541 RTL5Q5HYW3 569 aaPredicted RBP29.03■■■□□ 2.24
HOMER3-205ENST00000542541 CDHR2Q9BYE9 1310 aa29.03■■■□□ 2.24
HOMER3-205ENST00000542541 AFDNP55196 1824 aaKnown RBP29.02■■■□□ 2.24
HOMER3-205ENST00000542541 IRX6P78412 446 aaPredicted RBP29.02■■■□□ 2.24
HOMER3-205ENST00000542541 ST5P78524 1137 aa29.02■■■□□ 2.24
HOMER3-205ENST00000542541 NUTM1Q86Y26 1132 aa29.02■■■□□ 2.24
HOMER3-205ENST00000542541 ERFEQ4G0M1 354 aa29.02■■■□□ 2.24
HOMER3-205ENST00000542541 PRR5LQ6MZQ0 368 aa29.02■■■□□ 2.24
HOMER3-205ENST00000542541 JARID2Q92833 1246 aaPredicted RBP29.02■■■□□ 2.24
HOMER3-205ENST00000542541 SPON1Q9HCB6 807 aa29.02■■■□□ 2.24
HOMER3-205ENST00000542541 IRS4O14654 1257 aaPredicted RBP29.01■■■□□ 2.23
HOMER3-205ENST00000542541 CASP7P55210 303 aa29.01■■■□□ 2.23
HOMER3-205ENST00000542541 AAMPQ13685 434 aa29.01■■■□□ 2.23
HOMER3-205ENST00000542541 SLC10A5Q5PT55 438 aa29.01■■■□□ 2.23
HOMER3-205ENST00000542541 GNAI2P04899 355 aa28.99■■■□□ 2.23
HOMER3-205ENST00000542541 SYNE4Q8N205 404 aa28.99■■■□□ 2.23
HOMER3-205ENST00000542541 ZBTB40Q9NUA8 1239 aa28.99■■■□□ 2.23
HOMER3-205ENST00000542541 PLA2G12BQ9BX93 195 aa28.98■■■□□ 2.23
HOMER3-205ENST00000542541 PDE8AO60658 829 aa28.97■■■□□ 2.23
HOMER3-205ENST00000542541 EXOC6Q8TAG9 804 aa28.97■■■□□ 2.23
HOMER3-205ENST00000542541 SRCAPQ6ZRS2 3230 aa28.96■■■□□ 2.23
HOMER3-205ENST00000542541 SGIP1Q9BQI5 828 aa28.96■■■□□ 2.23
HOMER3-205ENST00000542541 LRP5O75197 1615 aa28.96■■■□□ 2.23
HOMER3-205ENST00000542541 HCLS1P14317 486 aaPredicted RBP28.95■■■□□ 2.23
HOMER3-205ENST00000542541 SUCLG2Q96I99 432 aa28.95■■■□□ 2.23
HOMER3-205ENST00000542541 NLRP3Q96P20 1036 aa28.95■■■□□ 2.23
HOMER3-205ENST00000542541 LRRFIP2Q9Y608 721 aaKnown RBP28.95■■■□□ 2.23
HOMER3-205ENST00000542541 PTGER2P43116 358 aa28.94■■■□□ 2.22
HOMER3-205ENST00000542541 BRIP1Q9BX63 1249 aa28.94■■■□□ 2.22
HOMER3-205ENST00000542541 CCDC24Q8N4L8 307 aa28.94■■■□□ 2.22
HOMER3-205ENST00000542541 ABCC12Q96J65 1359 aa28.92■■■□□ 2.22
HOMER3-205ENST00000542541 RIC1Q4ADV7 1423 aa28.92■■■□□ 2.22
HOMER3-205ENST00000542541 NRXN2Q9P2S2 1712 aa28.92■■■□□ 2.22
HOMER3-205ENST00000542541 PDE6BP35913 854 aa28.91■■■□□ 2.22
HOMER3-205ENST00000542541 KAZALD1Q96I82 304 aa28.91■■■□□ 2.22
HOMER3-205ENST00000542541 CTSWP56202 376 aa28.91■■■□□ 2.22
HOMER3-205ENST00000542541 FOXO4P98177 505 aa28.91■■■□□ 2.22
HOMER3-205ENST00000542541 BICC1Q9H694 974 aaKnown RBP28.91■■■□□ 2.22
HOMER3-205ENST00000542541 SF3B3Q15393 1217 aaKnown RBP28.89■■■□□ 2.22
HOMER3-205ENST00000542541 EPHA10Q5JZY3 1008 aa28.89■■■□□ 2.22
HOMER3-205ENST00000542541 C1orf115Q9H7X2 142 aa28.89■■■□□ 2.22
HOMER3-205ENST00000542541 PDZRN3Q9UPQ7 1066 aa28.89■■■□□ 2.22
HOMER3-205ENST00000542541 CSF1RP07333 972 aa28.88■■■□□ 2.21
HOMER3-205ENST00000542541 RABL6Q3YEC7 729 aaPredicted RBP28.88■■■□□ 2.21
HOMER3-205ENST00000542541 CCDC152Q4G0S7 254 aa28.88■■■□□ 2.21
HOMER3-205ENST00000542541 LMBR1LQ6UX01 489 aa28.88■■■□□ 2.21
HOMER3-205ENST00000542541 TTLL11Q8NHH1 800 aa28.88■■■□□ 2.21
HOMER3-205ENST00000542541 RPAP2Q8IXW5 612 aaPredicted RBP28.87■■■□□ 2.21
HOMER3-205ENST00000542541 KLRG2A4D1S0 409 aaPredicted RBP28.87■■■□□ 2.21
HOMER3-205ENST00000542541 ANKRD44Q8N8A2 993 aa28.87■■■□□ 2.21
HOMER3-205ENST00000542541 ERICH6BQ5W0A0 696 aa28.86■■■□□ 2.21
HOMER3-205ENST00000542541 MTX1Q13505 466 aa28.85■■■□□ 2.21
HOMER3-205ENST00000542541 CHMP3Q9Y3E7 222 aa28.85■■■□□ 2.21
HOMER3-205ENST00000542541 C10orf71Q711Q0 1435 aa28.85■■■□□ 2.21
HOMER3-205ENST00000542541 ATP8B2P98198 1209 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms