RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 ATP5J2-PTCD1G3V325 749 aa13.91□□□□□ -0.18
EIF3A-203ENST00000541549 RNF187Q5TA31 235 aaPredicted RBP13.91□□□□□ -0.18
EIF3A-203ENST00000541549 PHACTR3Q96KR7 559 aa13.91□□□□□ -0.18
EIF3A-203ENST00000541549 HMG20BQ9P0W2 317 aa13.91□□□□□ -0.18
EIF3A-203ENST00000541549 FBXO31Q5XUX0 539 aaPredicted RBP13.9□□□□□ -0.18
EIF3A-203ENST00000541549 INTS4Q96HW7 963 aaKnown RBP13.9□□□□□ -0.18
EIF3A-203ENST00000541549 ZBTB7BO15156 539 aaPredicted RBP13.9□□□□□ -0.18
EIF3A-203ENST00000541549 YEATS4O95619 227 aa13.9□□□□□ -0.18
EIF3A-203ENST00000541549 CACNA2D4Q7Z3S7 1137 aa13.9□□□□□ -0.18
EIF3A-203ENST00000541549 GTPBP4Q9BZE4 634 aaKnown RBP13.9□□□□□ -0.18
EIF3A-203ENST00000541549 AKAP2Q9Y2D5 859 aa13.9□□□□□ -0.18
EIF3A-203ENST00000541549 MATR3P43243 847 aaKnown RBP eCLIP13.9□□□□□ -0.182e-6■■■■■ 39.1
EIF3A-203ENST00000541549 ATP8B2P98198 1209 aa13.9□□□□□ -0.18
EIF3A-203ENST00000541549 GIMAP7Q8NHV1 300 aa13.9□□□□□ -0.18
EIF3A-203ENST00000541549 TSC1Q92574 1164 aa13.9□□□□□ -0.18
EIF3A-203ENST00000541549 CTR9Q6PD62 1173 aa13.9□□□□□ -0.19
EIF3A-203ENST00000541549 GPATCH11Q8N954 259 aa13.9□□□□□ -0.19
EIF3A-203ENST00000541549 MRPS27Q92552 414 aaKnown RBP13.9□□□□□ -0.19
EIF3A-203ENST00000541549 CCDC113Q9H0I3 377 aa13.9□□□□□ -0.19
EIF3A-203ENST00000541549 FAM173BQ6P4H8 233 aa13.89□□□□□ -0.19
EIF3A-203ENST00000541549 CHMLP26374 656 aa13.89□□□□□ -0.19
EIF3A-203ENST00000541549 MARCKSP29966 332 aaPredicted RBP13.89□□□□□ -0.19
EIF3A-203ENST00000541549 TDRD12Q587J7 1177 aaKnown RBP13.89□□□□□ -0.19
EIF3A-203ENST00000541549 DNMBPQ6XZF7 1577 aa13.89□□□□□ -0.19
EIF3A-203ENST00000541549 ANKRD36BQ8N2N9 1353 aa13.89□□□□□ -0.19
EIF3A-203ENST00000541549 FKBP15Q5T1M5 1219 aa13.89□□□□□ -0.19
EIF3A-203ENST00000541549 THEMISQ8N1K5 641 aaPredicted RBP13.89□□□□□ -0.19
EIF3A-203ENST00000541549 FAM107BQ9H098 131 aa13.89□□□□□ -0.19
EIF3A-203ENST00000541549 N4BP3O15049 544 aa13.88□□□□□ -0.19
EIF3A-203ENST00000541549 RANBP6O60518 1105 aaKnown RBP13.88□□□□□ -0.19
EIF3A-203ENST00000541549 ZNF445P59923 1031 aa13.88□□□□□ -0.19
EIF3A-203ENST00000541549 SEPT7Q16181 437 aaKnown RBP13.88□□□□□ -0.19
EIF3A-203ENST00000541549 HYPKQ9NX55 129 aa13.88□□□□□ -0.19
EIF3A-203ENST00000541549 KLF18A0A0U1RQI7 1052 aa13.88□□□□□ -0.19
EIF3A-203ENST00000541549 MCM3P25205 808 aa13.88□□□□□ -0.19
EIF3A-203ENST00000541549 SYT10Q6XYQ8 523 aa13.88□□□□□ -0.19
EIF3A-203ENST00000541549 BCCIPQ9P287 314 aaKnown RBP eCLIP13.88□□□□□ -0.19
EIF3A-203ENST00000541549 ANKRD62A6NC57 917 aa13.88□□□□□ -0.19
EIF3A-203ENST00000541549 USP5P45974 858 aa13.88□□□□□ -0.19
EIF3A-203ENST00000541549 HLTFQ14527 1009 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■□□□□ 10
EIF3A-203ENST00000541549 SPECC1Q5M775 1068 aa13.88□□□□□ -0.19
EIF3A-203ENST00000541549 PRDM11Q9NQV5 511 aa13.88□□□□□ -0.19
EIF3A-203ENST00000541549 POLKQ9UBT6 870 aa13.88□□□□□ -0.19
EIF3A-203ENST00000541549 PA2G4Q9UQ80 394 aaKnown RBP13.88□□□□□ -0.19
EIF3A-203ENST00000541549 IFT140Q96RY7 1462 aa13.88□□□□□ -0.19
EIF3A-203ENST00000541549 PIK3R4Q99570 1358 aa13.88□□□□□ -0.19
EIF3A-203ENST00000541549 U2AF2P26368 475 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■□□□□ 11.2
EIF3A-203ENST00000541549 JADE2Q9NQC1 790 aa13.88□□□□□ -0.19
EIF3A-203ENST00000541549 USO1O60763 962 aaKnown RBP13.87□□□□□ -0.19
EIF3A-203ENST00000541549 PHACTR2O75167 634 aa13.87□□□□□ -0.19
EIF3A-203ENST00000541549 SSRP1Q08945 709 aaKnown RBP13.87□□□□□ -0.19
EIF3A-203ENST00000541549 Q6ZUG5 572 aa13.87□□□□□ -0.19
EIF3A-203ENST00000541549 RSPH14Q9UHP6 348 aa13.87□□□□□ -0.19
EIF3A-203ENST00000541549 RIOK3O14730 519 aaKnown RBP13.87□□□□□ -0.19
EIF3A-203ENST00000541549 IFIT5Q13325 482 aaKnown RBP13.87□□□□□ -0.19
EIF3A-203ENST00000541549 CTCFLQ8NI51 663 aaPredicted RBP13.87□□□□□ -0.19
EIF3A-203ENST00000541549 POTEB2H3BUK9 544 aa13.87□□□□□ -0.19
EIF3A-203ENST00000541549 ZBTB3Q9H5J0 574 aa13.87□□□□□ -0.19
EIF3A-203ENST00000541549 TMEM63CQ9P1W3 806 aa13.87□□□□□ -0.19
EIF3A-203ENST00000541549 HMGXB3Q12766 1538 aa13.87□□□□□ -0.19
EIF3A-203ENST00000541549 GPATCH8Q9UKJ3 1502 aaKnown RBP13.87□□□□□ -0.19
EIF3A-203ENST00000541549 METAP2P50579 478 aaKnown RBP eCLIP13.86□□□□□ -0.19
EIF3A-203ENST00000541549 MNAT1P51948 309 aa13.86□□□□□ -0.19
EIF3A-203ENST00000541549 GAS2L3Q86XJ1 694 aa13.86□□□□□ -0.19
EIF3A-203ENST00000541549 GTF3C6Q969F1 213 aa13.86□□□□□ -0.19
EIF3A-203ENST00000541549 SLC26A6Q9BXS9 759 aa13.86□□□□□ -0.19
EIF3A-203ENST00000541549 LMBRD1Q9NUN5 540 aa13.86□□□□□ -0.19
EIF3A-203ENST00000541549 CHPF2Q9P2E5 772 aa13.86□□□□□ -0.19
EIF3A-203ENST00000541549 THOC2Q8NI27 1593 aaKnown RBP13.86□□□□□ -0.19
EIF3A-203ENST00000541549 TMEM67Q5HYA8 995 aa13.86□□□□□ -0.19
EIF3A-203ENST00000541549 SMAP1Q8IYB5 467 aaPredicted RBP13.86□□□□□ -0.19
EIF3A-203ENST00000541549 DYDC1Q8WWB3 177 aa13.86□□□□□ -0.19
EIF3A-203ENST00000541549 KCNG4Q8TDN1 519 aa13.86□□□□□ -0.19
EIF3A-203ENST00000541549 FEZ1Q99689 392 aa13.86□□□□□ -0.19
EIF3A-203ENST00000541549 IFNKQ9P0W0 207 aa13.86□□□□□ -0.19
EIF3A-203ENST00000541549 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
EIF3A-203ENST00000541549 CAPN2P17655 700 aa13.86□□□□□ -0.19
EIF3A-203ENST00000541549 MTIF2P46199 727 aaKnown RBP13.86□□□□□ -0.19
EIF3A-203ENST00000541549 PIK3C2GO75747 1445 aa13.86□□□□□ -0.19
EIF3A-203ENST00000541549 IFFO1Q0D2I5 559 aa13.85□□□□□ -0.19
EIF3A-203ENST00000541549 MAP3K12Q12852 859 aa13.85□□□□□ -0.19
EIF3A-203ENST00000541549 CHST3Q7LGC8 479 aa13.85□□□□□ -0.19
EIF3A-203ENST00000541549 IQCA1Q86XH1 822 aa13.85□□□□□ -0.19
EIF3A-203ENST00000541549 KCNH5Q8NCM2 988 aa13.85□□□□□ -0.19
EIF3A-203ENST00000541549 OGFRQ9NZT2 677 aa13.85□□□□□ -0.19
EIF3A-203ENST00000541549 AFMP43652 599 aa13.85□□□□□ -0.19
EIF3A-203ENST00000541549 AMOTQ4VCS5 1084 aa13.85□□□□□ -0.19
EIF3A-203ENST00000541549 NMIQ13287 307 aaPredicted RBP13.84□□□□□ -0.19
EIF3A-203ENST00000541549 NCOA7Q8NI08 942 aa13.84□□□□□ -0.19
EIF3A-203ENST00000541549 FOXO3O43524 673 aa13.84□□□□□ -0.19
EIF3A-203ENST00000541549 GADD45BO75293 160 aaPredicted RBP13.84□□□□□ -0.19
EIF3A-203ENST00000541549 IDEP14735 1019 aa13.84□□□□□ -0.19
EIF3A-203ENST00000541549 CCDC178Q5BJE1 867 aa13.84□□□□□ -0.19
EIF3A-203ENST00000541549 MYRIPQ8NFW9 859 aa13.84□□□□□ -0.19
EIF3A-203ENST00000541549 CTAGE15A4D2H0 777 aa13.84□□□□□ -0.19
EIF3A-203ENST00000541549 CTAGE8P0CG41 777 aa13.84□□□□□ -0.19
EIF3A-203ENST00000541549 NLRP5P59047 1200 aa13.84□□□□□ -0.19
EIF3A-203ENST00000541549 CTAGE6Q86UF2 777 aa13.84□□□□□ -0.19
EIF3A-203ENST00000541549 CTAGE4Q8IX94 777 aa13.84□□□□□ -0.19
EIF3A-203ENST00000541549 IGHMBP2P38935 993 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms