RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 SPEF2Q9C093 1822 aa10.18□□□□□ -0.78
C2CD3-215ENST00000540452 KAT6BQ8WYB5 2073 aa10.18□□□□□ -0.78
C2CD3-215ENST00000540452 LAMB2P55268 1798 aa10.17□□□□□ -0.78
C2CD3-215ENST00000540452 BCORQ6W2J9 1755 aa10.17□□□□□ -0.78
C2CD3-215ENST00000540452 A0A087WZG4 1122 aa10.17□□□□□ -0.78
C2CD3-215ENST00000540452 G3BP1Q13283 466 aaKnown RBP eCLIP10.17□□□□□ -0.78
C2CD3-215ENST00000540452 NUTM2BA6NNL0 878 aaPredicted RBP10.16□□□□□ -0.78
C2CD3-215ENST00000540452 NUTM2EB1AL46 878 aaPredicted RBP10.16□□□□□ -0.78
C2CD3-215ENST00000540452 HIP1O00291 1037 aa10.16□□□□□ -0.78
C2CD3-215ENST00000540452 SMARCA5O60264 1052 aaPredicted RBP10.16□□□□□ -0.78
C2CD3-215ENST00000540452 CIAO1O76071 339 aa10.16□□□□□ -0.78
C2CD3-215ENST00000540452 A1BGP04217 495 aa10.16□□□□□ -0.78
C2CD3-215ENST00000540452 PCCAP05165 728 aaPredicted RBP10.16□□□□□ -0.78
C2CD3-215ENST00000540452 MFAP1P55081 439 aaKnown RBP10.16□□□□□ -0.78
C2CD3-215ENST00000540452 NUTM2AQ8IVF1 878 aaPredicted RBP10.16□□□□□ -0.78
C2CD3-215ENST00000540452 CNTROBQ8N137 903 aa10.16□□□□□ -0.78
C2CD3-215ENST00000540452 PI4K2BQ8TCG2 481 aa10.16□□□□□ -0.78
C2CD3-215ENST00000540452 ANAPC15P60006 121 aa10.15□□□□□ -0.78
C2CD3-215ENST00000540452 OS9Q13438 667 aaPredicted RBP10.15□□□□□ -0.78
C2CD3-215ENST00000540452 DNAJC10Q8IXB1 793 aa10.15□□□□□ -0.78
C2CD3-215ENST00000540452 C16orf71Q8IYS4 520 aaPredicted RBP10.15□□□□□ -0.78
C2CD3-215ENST00000540452 MARCH10Q8NA82 808 aaPredicted RBP10.15□□□□□ -0.78
C2CD3-215ENST00000540452 ZBTB38Q8NAP3 1195 aaPredicted RBP10.15□□□□□ -0.78
C2CD3-215ENST00000540452 NGLY1Q96IV0 654 aa10.15□□□□□ -0.78
C2CD3-215ENST00000540452 ANP32EQ9BTT0 268 aa10.15□□□□□ -0.78
C2CD3-215ENST00000540452 ECHDC1Q9NTX5 307 aa10.15□□□□□ -0.78
C2CD3-215ENST00000540452 LY75O60449 1722 aa10.14□□□□□ -0.79
C2CD3-215ENST00000540452 ONECUT3O60422 494 aaPredicted RBP10.14□□□□□ -0.79
C2CD3-215ENST00000540452 IFIT2P09913 472 aaKnown RBP10.14□□□□□ -0.79
C2CD3-215ENST00000540452 RFX5P48382 616 aaPredicted RBP10.14□□□□□ -0.79
C2CD3-215ENST00000540452 PRIM1P49642 420 aaKnown RBP10.14□□□□□ -0.79
C2CD3-215ENST00000540452 PTPN12Q05209 780 aaKnown RBP10.14□□□□□ -0.79
C2CD3-215ENST00000540452 TTLL7Q6ZT98 887 aa10.14□□□□□ -0.79
C2CD3-215ENST00000540452 UBE3BQ7Z3V4 1068 aa10.14□□□□□ -0.79
C2CD3-215ENST00000540452 OTUD7AQ8TE49 926 aaPredicted RBP10.14□□□□□ -0.79
C2CD3-215ENST00000540452 RUFY2Q8WXA3 655 aa10.14□□□□□ -0.79
C2CD3-215ENST00000540452 RBM42Q9BTD8 480 aaKnown RBP10.14□□□□□ -0.79
C2CD3-215ENST00000540452 USP26Q9BXU7 913 aa10.14□□□□□ -0.79
C2CD3-215ENST00000540452 CCDC87Q9NVE4 849 aa10.14□□□□□ -0.79
C2CD3-215ENST00000540452 ATRNO75882 1429 aa10.14□□□□□ -0.79
C2CD3-215ENST00000540452 SBF2Q86WG5 1849 aa10.14□□□□□ -0.79
C2CD3-215ENST00000540452 PALLDQ8WX93 1383 aa10.14□□□□□ -0.79
C2CD3-215ENST00000540452 ABCC12Q96J65 1359 aa10.14□□□□□ -0.79
C2CD3-215ENST00000540452 RAD50Q92878 1312 aa10.13□□□□□ -0.79
C2CD3-215ENST00000540452 BTAF1O14981 1849 aa10.13□□□□□ -0.79
C2CD3-215ENST00000540452 LOC102724428A0A0B4J2F2 783 aa10.13□□□□□ -0.79
C2CD3-215ENST00000540452 MCCP23508 829 aa10.13□□□□□ -0.79
C2CD3-215ENST00000540452 IL15P40933 162 aaPredicted RBP10.13□□□□□ -0.79
C2CD3-215ENST00000540452 EIF5P55010 431 aaKnown RBP10.13□□□□□ -0.79
C2CD3-215ENST00000540452 SIK1P57059 783 aa10.13□□□□□ -0.79
C2CD3-215ENST00000540452 FOXO4P98177 505 aa10.13□□□□□ -0.79
C2CD3-215ENST00000540452 RABEP1Q15276 862 aa10.13□□□□□ -0.79
C2CD3-215ENST00000540452 PARP10Q53GL7 1025 aa10.13□□□□□ -0.79
C2CD3-215ENST00000540452 CLEC4GQ6UXB4 293 aa10.13□□□□□ -0.79
C2CD3-215ENST00000540452 LRP5O75197 1615 aa10.13□□□□□ -0.79
C2CD3-215ENST00000540452 SCN7AQ01118 1682 aa10.12□□□□□ -0.79
C2CD3-215ENST00000540452 CNTNAP4Q9C0A0 1308 aa10.12□□□□□ -0.79
C2CD3-215ENST00000540452 SASH1O94885 1247 aa10.12□□□□□ -0.79
C2CD3-215ENST00000540452 CSF1RP07333 972 aa10.12□□□□□ -0.79
C2CD3-215ENST00000540452 CHMLP26374 656 aa10.12□□□□□ -0.79
C2CD3-215ENST00000540452 RC3H1Q5TC82 1133 aaKnown RBP10.12□□□□□ -0.79
C2CD3-215ENST00000540452 HSCBQ8IWL3 235 aa10.12□□□□□ -0.79
C2CD3-215ENST00000540452 EVI5LQ96CN4 794 aa10.12□□□□□ -0.79
C2CD3-215ENST00000540452 C8orf37Q96NL8 207 aa10.12□□□□□ -0.79
C2CD3-215ENST00000540452 SLC4A9Q96Q91 983 aa10.12□□□□□ -0.79
C2CD3-215ENST00000540452 ESYT1Q9BSJ8 1104 aa10.12□□□□□ -0.79
C2CD3-215ENST00000540452 SNRKQ9NRH2 765 aa10.12□□□□□ -0.79
C2CD3-215ENST00000540452 USP21Q9UK80 565 aa10.12□□□□□ -0.79
C2CD3-215ENST00000540452 ZNF652Q9Y2D9 606 aa10.12□□□□□ -0.79
C2CD3-215ENST00000540452 CCDC9Q9Y3X0 531 aaKnown RBP10.12□□□□□ -0.79
C2CD3-215ENST00000540452 RTL9Q8NET4 1388 aa10.12□□□□□ -0.79
C2CD3-215ENST00000540452 MYH14Q7Z406 1995 aaKnown RBP10.12□□□□□ -0.79
C2CD3-215ENST00000540452 APBB1O00213 710 aa10.11□□□□□ -0.79
C2CD3-215ENST00000540452 LMBR1LQ6UX01 489 aa10.11□□□□□ -0.79
C2CD3-215ENST00000540452 CCDC125Q86Z20 511 aa10.11□□□□□ -0.79
C2CD3-215ENST00000540452 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.11□□□□□ -0.79
C2CD3-215ENST00000540452 ZBTB3Q9H5J0 574 aa10.11□□□□□ -0.79
C2CD3-215ENST00000540452 IL1RAPL2Q9NP60 686 aa10.11□□□□□ -0.79
C2CD3-215ENST00000540452 TRPC5Q9UL62 973 aaPredicted RBP10.11□□□□□ -0.79
C2CD3-215ENST00000540452 ZBTB1Q9Y2K1 713 aa10.11□□□□□ -0.79
C2CD3-215ENST00000540452 TAF1LQ8IZX4 1826 aa10.11□□□□□ -0.79
C2CD3-215ENST00000540452 ATP5J2-PTCD1G3V325 749 aa10.1□□□□□ -0.79
C2CD3-215ENST00000540452 ATP5JP18859 108 aa10.1□□□□□ -0.79
C2CD3-215ENST00000540452 MCM2P49736 904 aa10.1□□□□□ -0.79
C2CD3-215ENST00000540452 EPHA10Q5JZY3 1008 aa10.1□□□□□ -0.79
C2CD3-215ENST00000540452 NLRP10Q86W26 655 aa10.1□□□□□ -0.79
C2CD3-215ENST00000540452 DZIP3Q86Y13 1208 aaKnown RBP10.1□□□□□ -0.79
C2CD3-215ENST00000540452 ZNF34Q8IZ26 560 aa10.1□□□□□ -0.79
C2CD3-215ENST00000540452 SYTL4Q96C24 671 aaPredicted RBP10.1□□□□□ -0.79
C2CD3-215ENST00000540452 KIF2CQ99661 725 aa10.1□□□□□ -0.79
C2CD3-215ENST00000540452 TBC1D2Q9BYX2 928 aa10.1□□□□□ -0.79
C2CD3-215ENST00000540452 CIZ1Q9ULV3 898 aaPredicted RBP10.1□□□□□ -0.79
C2CD3-215ENST00000540452 AKAP2Q9Y2D5 859 aa10.1□□□□□ -0.79
C2CD3-215ENST00000540452 ARAP2Q8WZ64 1704 aa10.1□□□□□ -0.79
C2CD3-215ENST00000540452 ZNF609O15014 1411 aa10.09□□□□□ -0.79
C2CD3-215ENST00000540452 TRIM6-TRIM34B2RNG4 842 aa10.09□□□□□ -0.79
C2CD3-215ENST00000540452 EYA2O00167 538 aa10.09□□□□□ -0.79
C2CD3-215ENST00000540452 SGSM2O43147 1006 aa10.09□□□□□ -0.79
C2CD3-215ENST00000540452 PDE8AO60658 829 aa10.09□□□□□ -0.79
C2CD3-215ENST00000540452 ATP6V1AP38606 617 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms