RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TMEM57Q8N5G2 664 aa19.47■□□□□ 0.71
DDB1-216ENST00000539739 NYXQ9GZU5 481 aa19.47■□□□□ 0.71
DDB1-216ENST00000539739 PARP3Q9Y6F1 533 aa19.47■□□□□ 0.71
DDB1-216ENST00000539739 UBN2Q6ZU65 1347 aa19.47■□□□□ 0.71
DDB1-216ENST00000539739 CASZ1Q86V15 1759 aa19.47■□□□□ 0.71
DDB1-216ENST00000539739 MMP10P09238 476 aa19.47■□□□□ 0.71
DDB1-216ENST00000539739 GCKRQ14397 625 aa19.47■□□□□ 0.71
DDB1-216ENST00000539739 NBPF5PQ86XG9 351 aaPredicted RBP19.47■□□□□ 0.71
DDB1-216ENST00000539739 ITPRIPQ8IWB1 547 aa19.47■□□□□ 0.71
DDB1-216ENST00000539739 UTP14AQ9BVJ6 771 aaKnown RBP19.47■□□□□ 0.71
DDB1-216ENST00000539739 FAM177BA6PVY3 158 aa19.46■□□□□ 0.71
DDB1-216ENST00000539739 NPHP1O15259 732 aa19.46■□□□□ 0.71
DDB1-216ENST00000539739 POLD1P28340 1107 aa19.46■□□□□ 0.71
DDB1-216ENST00000539739 SUSD4Q5VX71 490 aa19.46■□□□□ 0.71
DDB1-216ENST00000539739 TPTE2Q6XPS3 522 aa19.46■□□□□ 0.71
DDB1-216ENST00000539739 TRMT112Q9UI30 125 aaKnown RBP19.46■□□□□ 0.71
DDB1-216ENST00000539739 ATF5Q9Y2D1 282 aaPredicted RBP19.46■□□□□ 0.71
DDB1-216ENST00000539739 SERPINB2P05120 415 aa19.45■□□□□ 0.7
DDB1-216ENST00000539739 GTF2E1P29083 439 aaPredicted RBP19.45■□□□□ 0.7
DDB1-216ENST00000539739 C20orf194Q5TEA3 1177 aa19.45■□□□□ 0.7
DDB1-216ENST00000539739 C9orf78Q9NZ63 289 aaPredicted RBP19.45■□□□□ 0.7
DDB1-216ENST00000539739 ANKRD36CQ5JPF3 1778 aa19.44■□□□□ 0.7
DDB1-216ENST00000539739 POLRMTO00411 1230 aaKnown RBP19.44■□□□□ 0.7
DDB1-216ENST00000539739 IBTKQ9P2D0 1353 aaPredicted RBP19.44■□□□□ 0.7
DDB1-216ENST00000539739 DDR1Q08345 913 aa19.43■□□□□ 0.7
DDB1-216ENST00000539739 MVPQ14764 893 aaKnown RBP19.43■□□□□ 0.7
DDB1-216ENST00000539739 ZBTB38Q8NAP3 1195 aaPredicted RBP19.43■□□□□ 0.7
DDB1-216ENST00000539739 COG6Q9Y2V7 657 aa19.43■□□□□ 0.7
DDB1-216ENST00000539739 PCCAP05165 728 aaPredicted RBP19.43■□□□□ 0.7
DDB1-216ENST00000539739 CNBD1Q8NA66 436 aa19.43■□□□□ 0.7
DDB1-216ENST00000539739 CHMP4BQ9H444 224 aaKnown RBP19.43■□□□□ 0.7
DDB1-216ENST00000539739 SPON1Q9HCB6 807 aa19.43■□□□□ 0.7
DDB1-216ENST00000539739 GRM8O00222 908 aa19.42■□□□□ 0.7
DDB1-216ENST00000539739 NTSR2O95665 410 aa19.42■□□□□ 0.7
DDB1-216ENST00000539739 DDX19BQ9UMR2 479 aa19.42■□□□□ 0.7
DDB1-216ENST00000539739 SH3TC1Q8TE82 1336 aa19.42■□□□□ 0.7
DDB1-216ENST00000539739 HSP90B1P14625 803 aaKnown RBP19.41■□□□□ 0.7
DDB1-216ENST00000539739 ST5P78524 1137 aa19.41■□□□□ 0.7
DDB1-216ENST00000539739 FAM89AQ96GI7 184 aa19.41■□□□□ 0.7
DDB1-216ENST00000539739 HDAC5Q9UQL6 1122 aa19.41■□□□□ 0.7
DDB1-216ENST00000539739 AFDNP55196 1824 aaKnown RBP19.41■□□□□ 0.7
DDB1-216ENST00000539739 H7C1W4 665 aa19.4■□□□□ 0.7
DDB1-216ENST00000539739 GNAI3P08754 354 aa19.4■□□□□ 0.7
DDB1-216ENST00000539739 UBE3BQ7Z3V4 1068 aa19.4■□□□□ 0.7
DDB1-216ENST00000539739 USP44Q9H0E7 712 aa19.4■□□□□ 0.7
DDB1-216ENST00000539739 RTL5Q5HYW3 569 aaPredicted RBP19.4■□□□□ 0.7
DDB1-216ENST00000539739 NUTM1Q86Y26 1132 aa19.4■□□□□ 0.7
DDB1-216ENST00000539739 UBTFL1P0CB47 393 aaPredicted RBP19.39■□□□□ 0.69
DDB1-216ENST00000539739 PRR5LQ6MZQ0 368 aa19.39■□□□□ 0.69
DDB1-216ENST00000539739 N4BP2Q86UW6 1770 aaPredicted RBP19.39■□□□□ 0.69
DDB1-216ENST00000539739 COL24A1Q17RW2 1714 aa19.39■□□□□ 0.69
DDB1-216ENST00000539739 UTYO14607 1347 aa19.38■□□□□ 0.69
DDB1-216ENST00000539739 CDHR2Q9BYE9 1310 aa19.38■□□□□ 0.69
DDB1-216ENST00000539739 ERFEQ4G0M1 354 aa19.38■□□□□ 0.69
DDB1-216ENST00000539739 JARID2Q92833 1246 aaPredicted RBP19.38■□□□□ 0.69
DDB1-216ENST00000539739 MEIS3Q99687 375 aa19.38■□□□□ 0.69
DDB1-216ENST00000539739 IRS4O14654 1257 aaPredicted RBP19.37■□□□□ 0.69
DDB1-216ENST00000539739 ZBTB7BO15156 539 aaPredicted RBP19.37■□□□□ 0.69
DDB1-216ENST00000539739 NBPF7P0C2Y1 421 aaPredicted RBP19.37■□□□□ 0.69
DDB1-216ENST00000539739 NEFLP07196 543 aa19.36■□□□□ 0.69
DDB1-216ENST00000539739 PTGER2P43116 358 aa19.36■□□□□ 0.69
DDB1-216ENST00000539739 CASP7P55210 303 aa19.36■□□□□ 0.69
DDB1-216ENST00000539739 SLC10A5Q5PT55 438 aa19.36■□□□□ 0.69
DDB1-216ENST00000539739 SYNE4Q8N205 404 aa19.36■□□□□ 0.69
DDB1-216ENST00000539739 CRBNQ96SW2 442 aa19.36■□□□□ 0.69
DDB1-216ENST00000539739 SGIP1Q9BQI5 828 aa19.36■□□□□ 0.69
DDB1-216ENST00000539739 CCDC24Q8N4L8 307 aa19.36■□□□□ 0.69
DDB1-216ENST00000539739 PDE8AO60658 829 aa19.35■□□□□ 0.69
DDB1-216ENST00000539739 HCLS1P14317 486 aaPredicted RBP19.35■□□□□ 0.69
DDB1-216ENST00000539739 IRX6P78412 446 aaPredicted RBP19.35■□□□□ 0.69
DDB1-216ENST00000539739 GNAI2P04899 355 aa19.34■□□□□ 0.69
DDB1-216ENST00000539739 NLRP3Q96P20 1036 aa19.34■□□□□ 0.69
DDB1-216ENST00000539739 BRIP1Q9BX63 1249 aa19.34■□□□□ 0.69
DDB1-216ENST00000539739 NRXN2Q9P2S2 1712 aa19.34■□□□□ 0.69
DDB1-216ENST00000539739 SUCLG2Q96I99 432 aa19.33■□□□□ 0.69
DDB1-216ENST00000539739 PLA2G12BQ9BX93 195 aa19.33■□□□□ 0.69
DDB1-216ENST00000539739 ABCC12Q96J65 1359 aa19.33■□□□□ 0.69
DDB1-216ENST00000539739 PDE6BP35913 854 aa19.33■□□□□ 0.68
DDB1-216ENST00000539739 ZBTB40Q9NUA8 1239 aa19.33■□□□□ 0.68
DDB1-216ENST00000539739 AAMPQ13685 434 aa19.32■□□□□ 0.68
DDB1-216ENST00000539739 LRRFIP2Q9Y608 721 aaKnown RBP19.32■□□□□ 0.68
DDB1-216ENST00000539739 RIC1Q4ADV7 1423 aa19.31■□□□□ 0.68
DDB1-216ENST00000539739 PDZRN3Q9UPQ7 1066 aa19.31■□□□□ 0.68
DDB1-216ENST00000539739 CTSWP56202 376 aa19.3■□□□□ 0.68
DDB1-216ENST00000539739 EXOC6Q8TAG9 804 aa19.3■□□□□ 0.68
DDB1-216ENST00000539739 BICC1Q9H694 974 aaKnown RBP19.3■□□□□ 0.68
DDB1-216ENST00000539739 PPP1R1BQ9UD71 204 aaPredicted RBP19.3■□□□□ 0.68
DDB1-216ENST00000539739 CCDC152Q4G0S7 254 aa19.29■□□□□ 0.68
DDB1-216ENST00000539739 C10orf71Q711Q0 1435 aa19.29■□□□□ 0.68
DDB1-216ENST00000539739 FOXO4P98177 505 aa19.29■□□□□ 0.68
DDB1-216ENST00000539739 SF3B3Q15393 1217 aaKnown RBP19.29■□□□□ 0.68
DDB1-216ENST00000539739 KLHL34Q8N239 644 aa19.29■□□□□ 0.68
DDB1-216ENST00000539739 KAZALD1Q96I82 304 aa19.29■□□□□ 0.68
DDB1-216ENST00000539739 C1orf115Q9H7X2 142 aa19.29■□□□□ 0.68
DDB1-216ENST00000539739 KLRG2A4D1S0 409 aaPredicted RBP19.28■□□□□ 0.68
DDB1-216ENST00000539739 EPHA10Q5JZY3 1008 aa19.28■□□□□ 0.68
DDB1-216ENST00000539739 LMBR1LQ6UX01 489 aa19.28■□□□□ 0.68
DDB1-216ENST00000539739 TTLL11Q8NHH1 800 aa19.28■□□□□ 0.68
DDB1-216ENST00000539739 CHMP3Q9Y3E7 222 aa19.28■□□□□ 0.68
DDB1-216ENST00000539739 CD2APQ9Y5K6 639 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms