RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 NASPP49321 788 aaPredicted RBP17.62■□□□□ 0.41
CDCA3-207ENST00000538862 NKX1-1Q15270 411 aaPredicted RBP17.62■□□□□ 0.41
CDCA3-207ENST00000538862 HSP90AB4PQ58FF6 505 aa17.62■□□□□ 0.41
CDCA3-207ENST00000538862 AKAP4Q5JQC9 854 aa17.62■□□□□ 0.41
CDCA3-207ENST00000538862 BEND3Q5T5X7 828 aa17.62■□□□□ 0.41
CDCA3-207ENST00000538862 RHPN1Q8TCX5 695 aa17.62■□□□□ 0.41
CDCA3-207ENST00000538862 DNAAF4Q8WXU2 420 aa17.62■□□□□ 0.41
CDCA3-207ENST00000538862 ANP32BQ92688 251 aaKnown RBP17.62■□□□□ 0.41
CDCA3-207ENST00000538862 PALD1Q9ULE6 856 aa17.62■□□□□ 0.41
CDCA3-207ENST00000538862 LY75O60449 1722 aa17.61■□□□□ 0.41
CDCA3-207ENST00000538862 PRPF40AO75400 957 aaKnown RBP17.61■□□□□ 0.41
CDCA3-207ENST00000538862 ZSCAN23Q3MJ62 389 aa17.61■□□□□ 0.41
CDCA3-207ENST00000538862 LGR6Q9HBX8 967 aa17.61■□□□□ 0.41
CDCA3-207ENST00000538862 IL1RAPL2Q9NP60 686 aa17.61■□□□□ 0.41
CDCA3-207ENST00000538862 EIF2S2P20042 333 aaKnown RBP17.6■□□□□ 0.41
CDCA3-207ENST00000538862 CAVIN1Q6NZI2 390 aaKnown RBP17.6■□□□□ 0.41
CDCA3-207ENST00000538862 SRGAP3O43295 1099 aa17.6■□□□□ 0.41
CDCA3-207ENST00000538862 BRD1O95696 1058 aa17.6■□□□□ 0.41
CDCA3-207ENST00000538862 NCLP19338 710 aaKnown RBP17.6■□□□□ 0.41
CDCA3-207ENST00000538862 AMOTQ4VCS5 1084 aa17.6■□□□□ 0.41
CDCA3-207ENST00000538862 PI4K2BQ8TCG2 481 aa17.6■□□□□ 0.41
CDCA3-207ENST00000538862 PIGBQ92521 554 aa17.6■□□□□ 0.41
CDCA3-207ENST00000538862 PDGFDQ9GZP0 370 aaPredicted RBP17.6■□□□□ 0.41
CDCA3-207ENST00000538862 PAPPAQ13219 1627 aa17.6■□□□□ 0.41
CDCA3-207ENST00000538862 HSPA4P34932 840 aa17.59■□□□□ 0.41
CDCA3-207ENST00000538862 TEFQ10587 303 aa17.59■□□□□ 0.41
CDCA3-207ENST00000538862 NUTM1Q86Y26 1132 aa17.59■□□□□ 0.41
CDCA3-207ENST00000538862 CHPF2Q9P2E5 772 aa17.59■□□□□ 0.41
CDCA3-207ENST00000538862 NBPF7P0C2Y1 421 aaPredicted RBP17.59■□□□□ 0.41
CDCA3-207ENST00000538862 PI4KAP2A4QPH2 592 aa17.58■□□□□ 0.4
CDCA3-207ENST00000538862 BTBD11A6QL63 1104 aa17.58■□□□□ 0.4
CDCA3-207ENST00000538862 PI4KAP1Q8N8J0 262 aa17.58■□□□□ 0.4
CDCA3-207ENST00000538862 GPT2Q8TD30 523 aa17.58■□□□□ 0.4
CDCA3-207ENST00000538862 STK32BQ9NY57 414 aa17.58■□□□□ 0.4
CDCA3-207ENST00000538862 USP42Q9H9J4 1324 aaKnown RBP17.58■□□□□ 0.4
CDCA3-207ENST00000538862 PLEKHG2Q9H7P9 1386 aa17.58■□□□□ 0.4
CDCA3-207ENST00000538862 KDM6AO15550 1401 aaPredicted RBP17.58■□□□□ 0.4
CDCA3-207ENST00000538862 MTX1Q13505 466 aa17.57■□□□□ 0.4
CDCA3-207ENST00000538862 SLC15A2Q16348 729 aa17.57■□□□□ 0.4
CDCA3-207ENST00000538862 ZNF827Q17R98 1081 aa17.57■□□□□ 0.4
CDCA3-207ENST00000538862 CNTROBQ8N137 903 aa17.57■□□□□ 0.4
CDCA3-207ENST00000538862 SGSM2O43147 1006 aa17.57■□□□□ 0.4
CDCA3-207ENST00000538862 MBD3O95983 291 aa17.57■□□□□ 0.4
CDCA3-207ENST00000538862 C1orf141Q5JVX7 400 aa17.57■□□□□ 0.4
CDCA3-207ENST00000538862 PALLDQ8WX93 1383 aa17.57■□□□□ 0.4
CDCA3-207ENST00000538862 TMOD3Q9NYL9 352 aa17.57■□□□□ 0.4
CDCA3-207ENST00000538862 DBF4Q9UBU7 674 aaPredicted RBP17.57■□□□□ 0.4
CDCA3-207ENST00000538862 CCNL1Q9UK58 526 aaPredicted RBP17.57■□□□□ 0.4
CDCA3-207ENST00000538862 HDAC5Q9UQL6 1122 aa17.57■□□□□ 0.4
CDCA3-207ENST00000538862 ADCY9O60503 1353 aa17.56■□□□□ 0.4
CDCA3-207ENST00000538862 TTC41PQ6P2S7 1318 aa17.56■□□□□ 0.4
CDCA3-207ENST00000538862 ERBB4Q15303 1308 aa17.55■□□□□ 0.4
CDCA3-207ENST00000538862 RAD50Q92878 1312 aa17.55■□□□□ 0.4
CDCA3-207ENST00000538862 RNMTO43148 476 aaKnown RBP17.55■□□□□ 0.4
CDCA3-207ENST00000538862 KCNQ3O43525 872 aa17.55■□□□□ 0.4
CDCA3-207ENST00000538862 ALDH1L1O75891 902 aa17.55■□□□□ 0.4
CDCA3-207ENST00000538862 SLC27A3Q5K4L6 730 aa17.55■□□□□ 0.4
CDCA3-207ENST00000538862 CASZ1Q86V15 1759 aa17.55■□□□□ 0.4
CDCA3-207ENST00000538862 DCAF5Q96JK2 942 aa17.55■□□□□ 0.4
CDCA3-207ENST00000538862 ASAP1Q9ULH1 1129 aa17.55■□□□□ 0.4
CDCA3-207ENST00000538862 LRP5O75197 1615 aa17.54■□□□□ 0.4
CDCA3-207ENST00000538862 GLRX3O76003 335 aaKnown RBP17.54■□□□□ 0.4
CDCA3-207ENST00000538862 GLIPR1L2Q4G1C9 344 aa17.54■□□□□ 0.4
CDCA3-207ENST00000538862 IL25Q9H293 177 aa17.54■□□□□ 0.4
CDCA3-207ENST00000538862 HEG1Q9ULI3 1381 aa17.53■□□□□ 0.4
CDCA3-207ENST00000538862 LSG1Q9H089 658 aaKnown RBP17.53■□□□□ 0.4
CDCA3-207ENST00000538862 SCN11AQ9UI33 1791 aa17.53■□□□□ 0.4
CDCA3-207ENST00000538862 TAF1LQ8IZX4 1826 aa17.53■□□□□ 0.4
CDCA3-207ENST00000538862 LRSAM1Q6UWE0 723 aa17.53■□□□□ 0.4
CDCA3-207ENST00000538862 UPF3BQ9BZI7 483 aaKnown RBP17.53■□□□□ 0.4
CDCA3-207ENST00000538862 C5P01031 1676 aa17.52■□□□□ 0.4
CDCA3-207ENST00000538862 HS1BP3Q53T59 392 aa17.52■□□□□ 0.4
CDCA3-207ENST00000538862 KSR2Q6VAB6 950 aa17.52■□□□□ 0.4
CDCA3-207ENST00000538862 AKT1S1Q96B36 256 aa17.52■□□□□ 0.4
CDCA3-207ENST00000538862 RBSNQ9H1K0 784 aa17.52■□□□□ 0.4
CDCA3-207ENST00000538862 WDR33Q9C0J8 1336 aaKnown RBP17.51■□□□□ 0.39
CDCA3-207ENST00000538862 ERVV-2B6SEH9 535 aa17.51■□□□□ 0.39
CDCA3-207ENST00000538862 GIGYF1O75420 1035 aaPredicted RBP17.51■□□□□ 0.39
CDCA3-207ENST00000538862 ZBTB7AO95365 584 aa17.51■□□□□ 0.39
CDCA3-207ENST00000538862 CABP4P57796 275 aa17.51■□□□□ 0.39
CDCA3-207ENST00000538862 KIAA1211Q6ZU35 1233 aa17.51■□□□□ 0.39
CDCA3-207ENST00000538862 ERC1Q8IUD2 1116 aa17.51■□□□□ 0.39
CDCA3-207ENST00000538862 ATG3Q9NT62 314 aa17.51■□□□□ 0.39
CDCA3-207ENST00000538862 TMEM63CQ9P1W3 806 aa17.51■□□□□ 0.39
CDCA3-207ENST00000538862 SNX14Q9Y5W7 946 aa17.51■□□□□ 0.39
CDCA3-207ENST00000538862 MAP4K4O95819 1239 aaPredicted RBP17.51■□□□□ 0.39
CDCA3-207ENST00000538862 OS9Q13438 667 aaPredicted RBP17.51■□□□□ 0.39
CDCA3-207ENST00000538862 CLASRPQ8N2M8 674 aaKnown RBP17.51■□□□□ 0.39
CDCA3-207ENST00000538862 RUFY2Q8WXA3 655 aa17.51■□□□□ 0.39
CDCA3-207ENST00000538862 SMARCC1Q92922 1105 aaPredicted RBP17.51■□□□□ 0.39
CDCA3-207ENST00000538862 C9orf78Q9NZ63 289 aaPredicted RBP17.51■□□□□ 0.39
CDCA3-207ENST00000538862 RBM27Q9P2N5 1060 aaKnown RBP17.51■□□□□ 0.39
CDCA3-207ENST00000538862 NOL8Q76FK4 1167 aaKnown RBP17.5■□□□□ 0.39
CDCA3-207ENST00000538862 ZSCAN30Q86W11 494 aa17.5■□□□□ 0.39
CDCA3-207ENST00000538862 PDLIM2Q96JY6 352 aa17.5■□□□□ 0.39
CDCA3-207ENST00000538862 TTC14Q96N46 770 aa17.5■□□□□ 0.39
CDCA3-207ENST00000538862 HYPKQ9NX55 129 aa17.5■□□□□ 0.39
CDCA3-207ENST00000538862 MAP3K2Q9Y2U5 619 aa17.5■□□□□ 0.39
CDCA3-207ENST00000538862 ANXA1P04083 346 aa17.49■□□□□ 0.39
CDCA3-207ENST00000538862 FOXD4L5Q5VV16 416 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms