RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 CICQ96RK0 1608 aaPredicted RBP24.9■■□□□ 1.58
DDX55-205ENST00000538744 LMBR1LQ6UX01 489 aa24.9■■□□□ 1.58
DDX55-205ENST00000538744 NGLY1Q96IV0 654 aa24.9■■□□□ 1.58
DDX55-205ENST00000538744 MAP3K15Q6ZN16 1313 aa24.9■■□□□ 1.58
DDX55-205ENST00000538744 C8orf37Q96NL8 207 aa24.89■■□□□ 1.58
DDX55-205ENST00000538744 BCL9LQ86UU0 1499 aa24.89■■□□□ 1.58
DDX55-205ENST00000538744 RABEP1Q15276 862 aa24.89■■□□□ 1.57
DDX55-205ENST00000538744 VPS72Q15906 364 aa24.89■■□□□ 1.57
DDX55-205ENST00000538744 EAF2Q96CJ1 260 aaPredicted RBP24.89■■□□□ 1.57
DDX55-205ENST00000538744 SLKQ9H2G2 1235 aaPredicted RBP24.89■■□□□ 1.57
DDX55-205ENST00000538744 MAP4K4O95819 1239 aaPredicted RBP24.88■■□□□ 1.57
DDX55-205ENST00000538744 ACSBG1Q96GR2 724 aa24.88■■□□□ 1.57
DDX55-205ENST00000538744 RTL5Q5HYW3 569 aaPredicted RBP24.87■■□□□ 1.57
DDX55-205ENST00000538744 ZBTB1Q9Y2K1 713 aa24.87■■□□□ 1.57
DDX55-205ENST00000538744 A0A0G2JS52 829 aa24.86■■□□□ 1.57
DDX55-205ENST00000538744 GIGYF2Q6Y7W6 1299 aaKnown RBP24.86■■□□□ 1.57
DDX55-205ENST00000538744 ANTXR1Q9H6X2 564 aa24.86■■□□□ 1.57
DDX55-205ENST00000538744 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.86■■□□□ 1.57
DDX55-205ENST00000538744 SPATA31A6Q5VVP1 1343 aa24.86■■□□□ 1.57
DDX55-205ENST00000538744 IL6STP40189 918 aaPredicted RBP24.86■■□□□ 1.57
DDX55-205ENST00000538744 HSP90AB3PQ58FF7 597 aa24.86■■□□□ 1.57
DDX55-205ENST00000538744 ARXQ96QS3 562 aa24.86■■□□□ 1.57
DDX55-205ENST00000538744 CHMP3Q9Y3E7 222 aa24.86■■□□□ 1.57
DDX55-205ENST00000538744 RREB1Q92766 1687 aa24.86■■□□□ 1.57
DDX55-205ENST00000538744 NUP98P52948 1817 aa24.85■■□□□ 1.57
DDX55-205ENST00000538744 CCDC8Q9H0W5 538 aaPredicted RBP24.85■■□□□ 1.57
DDX55-205ENST00000538744 PCCAP05165 728 aaPredicted RBP24.84■■□□□ 1.57
DDX55-205ENST00000538744 FAM98CQ17RN3 349 aaKnown RBP24.84■■□□□ 1.57
DDX55-205ENST00000538744 EPB41L2O43491 1005 aaKnown RBP24.83■■□□□ 1.57
DDX55-205ENST00000538744 FNBP4Q8N3X1 1017 aaPredicted RBP24.83■■□□□ 1.57
DDX55-205ENST00000538744 MCCP23508 829 aa24.83■■□□□ 1.57
DDX55-205ENST00000538744 ANO2Q9NQ90 1003 aa24.83■■□□□ 1.57
DDX55-205ENST00000538744 TFCP2Q12800 502 aa24.82■■□□□ 1.56
DDX55-205ENST00000538744 EVI5LQ96CN4 794 aa24.82■■□□□ 1.56
DDX55-205ENST00000538744 TLR7Q9NYK1 1049 aaKnown RBP24.82■■□□□ 1.56
DDX55-205ENST00000538744 ERVV-1B6SEH8 477 aa24.81■■□□□ 1.56
DDX55-205ENST00000538744 TNNI3KQ59H18 835 aa24.81■■□□□ 1.56
DDX55-205ENST00000538744 ZBTB38Q8NAP3 1195 aaPredicted RBP24.81■■□□□ 1.56
DDX55-205ENST00000538744 SPRYD3Q8NCJ5 442 aa24.81■■□□□ 1.56
DDX55-205ENST00000538744 SMARCC1Q92922 1105 aaPredicted RBP24.81■■□□□ 1.56
DDX55-205ENST00000538744 FPGT-TNNI3KV9GXZ4 949 aa24.81■■□□□ 1.56
DDX55-205ENST00000538744 ZNF831Q5JPB2 1677 aa24.81■■□□□ 1.56
DDX55-205ENST00000538744 LOC102724428A0A0B4J2F2 783 aa24.81■■□□□ 1.56
DDX55-205ENST00000538744 K7ELQ4 463 aaPredicted RBP24.81■■□□□ 1.56
DDX55-205ENST00000538744 ATP6V1AP38606 617 aa24.81■■□□□ 1.56
DDX55-205ENST00000538744 SIK1P57059 783 aa24.81■■□□□ 1.56
DDX55-205ENST00000538744 NFKBIBQ15653 356 aa24.81■■□□□ 1.56
DDX55-205ENST00000538744 HLFQ16534 295 aa24.81■■□□□ 1.56
DDX55-205ENST00000538744 PLA2G12BQ9BX93 195 aa24.81■■□□□ 1.56
DDX55-205ENST00000538744 CCDC87Q9NVE4 849 aa24.81■■□□□ 1.56
DDX55-205ENST00000538744 PALLDQ8WX93 1383 aa24.8■■□□□ 1.56
DDX55-205ENST00000538744 CD2BP2O95400 341 aaKnown RBP24.8■■□□□ 1.56
DDX55-205ENST00000538744 DZIP3Q86Y13 1208 aaKnown RBP24.8■■□□□ 1.56
DDX55-205ENST00000538744 CDHR2Q9BYE9 1310 aa24.79■■□□□ 1.56
DDX55-205ENST00000538744 SGSM2O43147 1006 aa24.79■■□□□ 1.56
DDX55-205ENST00000538744 NLRP10Q86W26 655 aa24.79■■□□□ 1.56
DDX55-205ENST00000538744 RUFY2Q8WXA3 655 aa24.78■■□□□ 1.56
DDX55-205ENST00000538744 DIAPH3Q9NSV4 1193 aa24.78■■□□□ 1.56
DDX55-205ENST00000538744 MYH3P11055 1940 aa24.78■■□□□ 1.56
DDX55-205ENST00000538744 IL15P40933 162 aaPredicted RBP24.78■■□□□ 1.56
DDX55-205ENST00000538744 ANAPC15P60006 121 aa24.78■■□□□ 1.56
DDX55-205ENST00000538744 INTS5Q6P9B9 1019 aaKnown RBP24.78■■□□□ 1.56
DDX55-205ENST00000538744 CERKQ8TCT0 537 aa24.78■■□□□ 1.56
DDX55-205ENST00000538744 COL5A3P25940 1745 aaPredicted RBP24.78■■□□□ 1.56
DDX55-205ENST00000538744 THSD7AQ9UPZ6 1657 aa24.77■■□□□ 1.56
DDX55-205ENST00000538744 CIAO1O76071 339 aa24.77■■□□□ 1.56
DDX55-205ENST00000538744 GPTP24298 496 aa24.77■■□□□ 1.56
DDX55-205ENST00000538744 CRKLP46109 303 aaKnown RBP24.77■■□□□ 1.56
DDX55-205ENST00000538744 EIF5P55010 431 aaKnown RBP24.77■■□□□ 1.56
DDX55-205ENST00000538744 ATG9AQ7Z3C6 839 aa24.77■■□□□ 1.56
DDX55-205ENST00000538744 FAM89AQ96GI7 184 aa24.77■■□□□ 1.56
DDX55-205ENST00000538744 DBNLQ9UJU6 430 aaKnown RBP24.77■■□□□ 1.56
DDX55-205ENST00000538744 USP21Q9UK80 565 aa24.77■■□□□ 1.56
DDX55-205ENST00000538744 EYA2O00167 538 aa24.76■■□□□ 1.55
DDX55-205ENST00000538744 ST18O60284 1047 aa24.76■■□□□ 1.55
DDX55-205ENST00000538744 IL25Q9H293 177 aa24.76■■□□□ 1.55
DDX55-205ENST00000538744 GPR108Q9NPR9 543 aa24.76■■□□□ 1.55
DDX55-205ENST00000538744 CHMP5Q9NZZ3 219 aa24.76■■□□□ 1.55
DDX55-205ENST00000538744 HIP1O00291 1037 aa24.75■■□□□ 1.55
DDX55-205ENST00000538744 ATP5JP18859 108 aa24.75■■□□□ 1.55
DDX55-205ENST00000538744 TBC1D2BQ9UPU7 963 aa24.75■■□□□ 1.55
DDX55-205ENST00000538744 ITPK1Q13572 414 aa24.75■■□□□ 1.55
DDX55-205ENST00000538744 CCDC57Q2TAC2 916 aa24.75■■□□□ 1.55
DDX55-205ENST00000538744 CWC27Q6UX04 472 aaKnown RBP24.75■■□□□ 1.55
DDX55-205ENST00000538744 BOLA2Q9H3K6 86 aa24.75■■□□□ 1.55
DDX55-205ENST00000538744 MYH14Q7Z406 1995 aaKnown RBP24.74■■□□□ 1.55
DDX55-205ENST00000538744 KCNQ2O43526 872 aa24.74■■□□□ 1.55
DDX55-205ENST00000538744 IL17RAQ96F46 866 aa24.74■■□□□ 1.55
DDX55-205ENST00000538744 FBXO3Q9UK99 471 aa24.74■■□□□ 1.55
DDX55-205ENST00000538744 RAD50Q92878 1312 aa24.74■■□□□ 1.55
DDX55-205ENST00000538744 CSF1RP07333 972 aa24.73■■□□□ 1.55
DDX55-205ENST00000538744 KIAA1211Q6ZU35 1233 aa24.73■■□□□ 1.55
DDX55-205ENST00000538744 ZNF594Q96JF6 807 aaPredicted RBP24.73■■□□□ 1.55
DDX55-205ENST00000538744 HSP90AA1P07900 732 aaKnown RBP24.72■■□□□ 1.55
DDX55-205ENST00000538744 MYT1Q01538 1121 aa24.72■■□□□ 1.55
DDX55-205ENST00000538744 ZNF34Q8IZ26 560 aa24.72■■□□□ 1.55
DDX55-205ENST00000538744 DBNDD2Q9BQY9 259 aa24.72■■□□□ 1.55
DDX55-205ENST00000538744 LSG1Q9H089 658 aaKnown RBP24.72■■□□□ 1.55
DDX55-205ENST00000538744 ZNF609O15014 1411 aa24.71■■□□□ 1.55
DDX55-205ENST00000538744 HSPA4P34932 840 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms