RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 TAS1R3Q7RTX0 852 aa6.37□□□□□ -1.39
SNHG1-203ENST00000537024 TSEN2Q8NCE0 465 aaKnown RBP6.37□□□□□ -1.39
SNHG1-203ENST00000537024 PRDM15P57071 1507 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-203ENST00000537024 TERTO14746 1132 aaKnown RBP6.36□□□□□ -1.39
SNHG1-203ENST00000537024 SNRPBP14678 240 aaKnown RBP6.36□□□□□ -1.39
SNHG1-203ENST00000537024 ERCC3P19447 782 aa6.36□□□□□ -1.39
SNHG1-203ENST00000537024 SCTRP47872 440 aa6.36□□□□□ -1.39
SNHG1-203ENST00000537024 DHX9Q08211 1270 aaKnown RBP6.36□□□□□ -1.39
SNHG1-203ENST00000537024 CC2D2BQ6DHV5 1058 aa6.36□□□□□ -1.39
SNHG1-203ENST00000537024 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.36□□□□□ -1.39
SNHG1-203ENST00000537024 UBR1Q8IWV7 1749 aa6.36□□□□□ -1.39
SNHG1-203ENST00000537024 NKTRP30414 1462 aaKnown RBP6.35□□□□□ -1.39
SNHG1-203ENST00000537024 MIA2Q96PC5 1412 aa6.35□□□□□ -1.39
SNHG1-203ENST00000537024 CEP350Q5VT06 3117 aa6.35□□□□□ -1.39
SNHG1-203ENST00000537024 SMPD1P17405 629 aa6.35□□□□□ -1.39
SNHG1-203ENST00000537024 MARSP56192 900 aaKnown RBP6.35□□□□□ -1.39
SNHG1-203ENST00000537024 ERVK-9P63128 1117 aa6.35□□□□□ -1.39
SNHG1-203ENST00000537024 QTRT2Q9H974 415 aaKnown RBP6.35□□□□□ -1.39
SNHG1-203ENST00000537024 ZNF358Q9NW07 568 aa6.35□□□□□ -1.39
SNHG1-203ENST00000537024 EGFL7Q9UHF1 273 aa6.35□□□□□ -1.39
SNHG1-203ENST00000537024 ARHGAP23Q9P227 1491 aa6.34□□□□□ -1.39
SNHG1-203ENST00000537024 BLMP54132 1417 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-203ENST00000537024 MSH6P52701 1360 aa6.34□□□□□ -1.39
SNHG1-203ENST00000537024 TTC24A2A3L6 582 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-203ENST00000537024 H3BRB1 525 aa6.34□□□□□ -1.39
SNHG1-203ENST00000537024 PTCD1O75127 700 aaKnown RBP6.34□□□□□ -1.39
SNHG1-203ENST00000537024 FSHRP23945 695 aa6.34□□□□□ -1.39
SNHG1-203ENST00000537024 WEE1P30291 646 aa6.34□□□□□ -1.39
SNHG1-203ENST00000537024 ZNF211Q13398 564 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-203ENST00000537024 RC3H1Q5TC82 1133 aaKnown RBP6.34□□□□□ -1.39
SNHG1-203ENST00000537024 GGT6Q6P531 493 aa6.34□□□□□ -1.39
SNHG1-203ENST00000537024 GLYCTKQ8IVS8 523 aa6.34□□□□□ -1.39
SNHG1-203ENST00000537024 CDK15Q96Q40 435 aa6.34□□□□□ -1.39
SNHG1-203ENST00000537024 MKNK1Q9BUB5 465 aa6.34□□□□□ -1.39
SNHG1-203ENST00000537024 TUT1Q9H6E5 874 aaKnown RBP6.34□□□□□ -1.39
SNHG1-203ENST00000537024 ATP13A2Q9NQ11 1180 aa6.34□□□□□ -1.39
SNHG1-203ENST00000537024 SLIT1O75093 1534 aa6.34□□□□□ -1.39
SNHG1-203ENST00000537024 SYCP2Q9BX26 1530 aa6.34□□□□□ -1.39
SNHG1-203ENST00000537024 NCOA2Q15596 1464 aa6.34□□□□□ -1.4
SNHG1-203ENST00000537024 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
SNHG1-203ENST00000537024 BACH1O14867 736 aa6.33□□□□□ -1.4
SNHG1-203ENST00000537024 C1QTNF8P60827 252 aa6.33□□□□□ -1.4
SNHG1-203ENST00000537024 NGLY1Q96IV0 654 aa6.33□□□□□ -1.4
SNHG1-203ENST00000537024 KRTAP4-6Q9BYQ5 205 aa6.33□□□□□ -1.4
SNHG1-203ENST00000537024 ANO2Q9NQ90 1003 aa6.33□□□□□ -1.4
SNHG1-203ENST00000537024 CYLDQ9NQC7 956 aa6.33□□□□□ -1.4
SNHG1-203ENST00000537024 TROQ12816 1431 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-203ENST00000537024 UNC13BO14795 1591 aa6.32□□□□□ -1.4
SNHG1-203ENST00000537024 MAST1Q9Y2H9 1570 aa6.32□□□□□ -1.4
SNHG1-203ENST00000537024 TMEM229AB2RXF0 380 aa6.32□□□□□ -1.4
SNHG1-203ENST00000537024 ICMTO60725 284 aa6.32□□□□□ -1.4
SNHG1-203ENST00000537024 IGFBP4P22692 258 aa6.32□□□□□ -1.4
SNHG1-203ENST00000537024 GDF10P55107 478 aa6.32□□□□□ -1.4
SNHG1-203ENST00000537024 FKBP5Q13451 457 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-203ENST00000537024 DNAJC14Q6Y2X3 702 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-203ENST00000537024 MPNDQ8N594 471 aa6.32□□□□□ -1.4
SNHG1-203ENST00000537024 GTF3C2Q8WUA4 911 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-203ENST00000537024 TRIM47Q96LD4 638 aa6.32□□□□□ -1.4
SNHG1-203ENST00000537024 OSBPL3Q9H4L5 887 aa6.32□□□□□ -1.4
SNHG1-203ENST00000537024 TMPRSS4Q9NRS4 437 aa6.32□□□□□ -1.4
SNHG1-203ENST00000537024 SEPT3Q9UH03 358 aa6.32□□□□□ -1.4
SNHG1-203ENST00000537024 TLL2Q9Y6L7 1015 aa6.32□□□□□ -1.4
SNHG1-203ENST00000537024 CDC42BPAQ5VT25 1732 aa6.32□□□□□ -1.4
SNHG1-203ENST00000537024 WNT7AO00755 349 aa6.31□□□□□ -1.4
SNHG1-203ENST00000537024 FOXO3O43524 673 aa6.31□□□□□ -1.4
SNHG1-203ENST00000537024 C21orf2O43822 256 aa6.31□□□□□ -1.4
SNHG1-203ENST00000537024 GRM5P41594 1212 aa6.31□□□□□ -1.4
SNHG1-203ENST00000537024 SF3B2Q13435 895 aaKnown RBP6.31□□□□□ -1.4
SNHG1-203ENST00000537024 CYP2U1Q7Z449 544 aa6.31□□□□□ -1.4
SNHG1-203ENST00000537024 DEFB132Q7Z7B7 95 aa6.31□□□□□ -1.4
SNHG1-203ENST00000537024 CCDC116Q8IYX3 515 aa6.31□□□□□ -1.4
SNHG1-203ENST00000537024 TNS4Q8IZW8 715 aa6.31□□□□□ -1.4
SNHG1-203ENST00000537024 ZNF784Q8NCA9 323 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-203ENST00000537024 SNIP1Q8TAD8 396 aaKnown RBP6.31□□□□□ -1.4
SNHG1-203ENST00000537024 VTI1AQ96AJ9 217 aa6.31□□□□□ -1.4
SNHG1-203ENST00000537024 SPHKAPQ2M3C7 1700 aa6.3□□□□□ -1.4
SNHG1-203ENST00000537024 GPATCH8Q9UKJ3 1502 aaKnown RBP6.3□□□□□ -1.4
SNHG1-203ENST00000537024 SPAG9O60271 1321 aaKnown RBP6.3□□□□□ -1.4
SNHG1-203ENST00000537024 RBM47A0AV96 593 aaKnown RBP6.3□□□□□ -1.4
SNHG1-203ENST00000537024 J3QL48 77 aa6.3□□□□□ -1.4
SNHG1-203ENST00000537024 WASLO00401 505 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-203ENST00000537024 ADH1CP00326 375 aa6.3□□□□□ -1.4
SNHG1-203ENST00000537024 INHAP05111 366 aa6.3□□□□□ -1.4
SNHG1-203ENST00000537024 SCNN1DP51172 638 aa6.3□□□□□ -1.4
SNHG1-203ENST00000537024 FKBP4Q02790 459 aaKnown RBP eCLIP6.3□□□□□ -1.4
SNHG1-203ENST00000537024 NR5A1Q13285 461 aa6.3□□□□□ -1.4
SNHG1-203ENST00000537024 ESCO1Q5FWF5 840 aa6.3□□□□□ -1.4
SNHG1-203ENST00000537024 PPP1R26Q5T8A7 1209 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-203ENST00000537024 SCG3Q8WXD2 468 aaKnown RBP6.3□□□□□ -1.4
SNHG1-203ENST00000537024 COL26A1Q96A83 441 aa6.3□□□□□ -1.4
SNHG1-203ENST00000537024 C8orf37Q96NL8 207 aa6.3□□□□□ -1.4
SNHG1-203ENST00000537024 SENP2Q9HC62 589 aa6.3□□□□□ -1.4
SNHG1-203ENST00000537024 SERTAD1Q9UHV2 236 aa6.3□□□□□ -1.4
SNHG1-203ENST00000537024 DNMT3AQ9Y6K1 912 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-203ENST00000537024 ATRNO75882 1429 aa6.3□□□□□ -1.4
SNHG1-203ENST00000537024 SETD5Q9C0A6 1442 aa6.3□□□□□ -1.4
SNHG1-203ENST00000537024 ANKRD33BA6NCL7 494 aa6.29□□□□□ -1.4
SNHG1-203ENST00000537024 RTEL1-TNFRSF6BF6WH68 1400 aa6.29□□□□□ -1.4
SNHG1-203ENST00000537024 STAU1O95793 577 aaKnown RBP6.29□□□□□ -1.4
SNHG1-203ENST00000537024 GNRH1P01148 92 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms