RNA–Protein interactions for RNA: ENST00000536852.1

MAP3K4-208, Transcript of mitogen-activated protein kinase kinase kinase 4, human

TSL 2

Gene MAP3K4, Length 2,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MAP3K4-208	ENST00000536852	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.78	□□□□□ -0.2
MAP3K4-208	ENST00000536852	CCDC39	Q9UFE4	941 aa		13.78	□□□□□ -0.2
MAP3K4-208	ENST00000536852	SIPA1L3	O60292	1781 aa	Predicted RBP	13.77	□□□□□ -0.2
MAP3K4-208	ENST00000536852	FIBP	O43427	364 aa		13.77	□□□□□ -0.21
MAP3K4-208	ENST00000536852	UBE2H	P62256	183 aa		13.77	□□□□□ -0.21
MAP3K4-208	ENST00000536852	CCDC183	Q5T5S1	534 aa		13.77	□□□□□ -0.21
MAP3K4-208	ENST00000536852	KLHDC4	Q8TBB5	520 aa		13.77	□□□□□ -0.21
MAP3K4-208	ENST00000536852	BOLA2	Q9H3K6	86 aa		13.77	□□□□□ -0.21
MAP3K4-208	ENST00000536852	NLRP2	Q9NX02	1062 aa		13.77	□□□□□ -0.21
MAP3K4-208	ENST00000536852	ZKSCAN5	Q9Y2L8	839 aa		13.77	□□□□□ -0.21
MAP3K4-208	ENST00000536852	NEURL1B	A8MQ27	555 aa		13.77	□□□□□ -0.21
MAP3K4-208	ENST00000536852	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.77	□□□□□ -0.21
MAP3K4-208	ENST00000536852	XAGE3	Q8WTP9	111 aa		13.77	□□□□□ -0.21
MAP3K4-208	ENST00000536852	MAP4K1	Q92918	833 aa		13.77	□□□□□ -0.21
MAP3K4-208	ENST00000536852	FSD1	Q9BTV5	496 aa		13.77	□□□□□ -0.21
MAP3K4-208	ENST00000536852	SLC52A2	Q9HAB3	445 aa		13.77	□□□□□ -0.21
MAP3K4-208	ENST00000536852	CAMTA1	Q9Y6Y1	1673 aa		13.76	□□□□□ -0.21
MAP3K4-208	ENST00000536852	NPHP3	Q7Z494	1330 aa		13.76	□□□□□ -0.21
MAP3K4-208	ENST00000536852	ZNF500	O60304	480 aa	Predicted RBP	13.76	□□□□□ -0.21
MAP3K4-208	ENST00000536852	COPS6	Q7L5N1	327 aa		13.76	□□□□□ -0.21
MAP3K4-208	ENST00000536852	PROSER2	Q86WR7	435 aa	Predicted RBP	13.76	□□□□□ -0.21
MAP3K4-208	ENST00000536852	NFATC2IP	Q8NCF5	419 aa		13.76	□□□□□ -0.21
MAP3K4-208	ENST00000536852	GCKR	Q14397	625 aa		13.75	□□□□□ -0.21
MAP3K4-208	ENST00000536852	ME3	Q16798	604 aa		13.75	□□□□□ -0.21
MAP3K4-208	ENST00000536852	NECAB1	Q8N987	351 aa		13.75	□□□□□ -0.21
MAP3K4-208	ENST00000536852	MYD88	Q99836	296 aa		13.75	□□□□□ -0.21
MAP3K4-208	ENST00000536852	MTMR6	Q9Y217	621 aa		13.75	□□□□□ -0.21
MAP3K4-208	ENST00000536852		A0A0D9SFI3	127 aa		13.75	□□□□□ -0.21
MAP3K4-208	ENST00000536852	SLC27A2	O14975	620 aa		13.75	□□□□□ -0.21
MAP3K4-208	ENST00000536852	TPM2	P07951	284 aa		13.75	□□□□□ -0.21
MAP3K4-208	ENST00000536852	LMTK3	Q96Q04	1460 aa		13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	VPS37C	A5D8V6	355 aa	Predicted RBP	13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	LETM1	O95202	739 aa	Predicted RBP	13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	PSMA5	P28066	241 aa		13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	MCM5	P33992	734 aa		13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	ST3GAL1	Q11201	340 aa		13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	EPHA10	Q5JZY3	1008 aa		13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	FAM184A	Q8NB25	1140 aa		13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	METTL22	Q9BUU2	404 aa	Predicted RBP	13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	ADAMTS7	Q9UKP4	1686 aa		13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	PTMA	P06454	111 aa	Known RBP	13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	PHKG2	P15735	406 aa		13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	TAT	P17735	454 aa	Predicted RBP	13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	DNM1	Q05193	864 aa	Known RBP	13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	CSPP1	Q1MSJ5	1256 aa		13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	RNF20	Q5VTR2	975 aa		13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	ZNF496	Q96IT1	587 aa	Predicted RBP	13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	SNRK	Q9NRH2	765 aa		13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	TPCN1	Q9ULQ1	816 aa		13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	RGPD5	Q99666	1765 aa		13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	KDM6A	O15550	1401 aa	Predicted RBP	13.74	□□□□□ -0.21
MAP3K4-208	ENST00000536852	ANKRD13D	Q6ZTN6	518 aa		13.73	□□□□□ -0.21
MAP3K4-208	ENST00000536852	C1orf167	Q5SNV9	1468 aa		13.73	□□□□□ -0.21
MAP3K4-208	ENST00000536852	UVSSA	Q2YD98	709 aa		13.72	□□□□□ -0.21
MAP3K4-208	ENST00000536852	BLOC1S2	Q6QNY1	142 aa		13.72	□□□□□ -0.21
MAP3K4-208	ENST00000536852	JARID2	Q92833	1246 aa	Predicted RBP	13.72	□□□□□ -0.21
MAP3K4-208	ENST00000536852	PIP4K2A	P48426	406 aa	Predicted RBP	13.72	□□□□□ -0.21
MAP3K4-208	ENST00000536852	COL9A3	Q14050	684 aa	Predicted RBP	13.72	□□□□□ -0.21
MAP3K4-208	ENST00000536852	IFNL2	Q8IZJ0	200 aa		13.72	□□□□□ -0.21
MAP3K4-208	ENST00000536852	USP16	Q9Y5T5	823 aa		13.72	□□□□□ -0.21
MAP3K4-208	ENST00000536852	SNRPA1	P09661	255 aa	Known RBP	13.71	□□□□□ -0.21
MAP3K4-208	ENST00000536852	CSB-PGBD3	P0DP91	1061 aa		13.71	□□□□□ -0.21
MAP3K4-208	ENST00000536852	HCLS1	P14317	486 aa	Predicted RBP	13.71	□□□□□ -0.21
MAP3K4-208	ENST00000536852	LARP1B	Q659C4	914 aa	Known RBP	13.71	□□□□□ -0.21
MAP3K4-208	ENST00000536852	TTC5	Q8N0Z6	440 aa		13.71	□□□□□ -0.21
MAP3K4-208	ENST00000536852	EDC3	Q96F86	508 aa	Known RBP	13.71	□□□□□ -0.21
MAP3K4-208	ENST00000536852	TCEANC2	Q96MN5	208 aa		13.71	□□□□□ -0.21
MAP3K4-208	ENST00000536852	C19orf44	Q9H6X5	657 aa		13.71	□□□□□ -0.21
MAP3K4-208	ENST00000536852	MED23	Q9ULK4	1368 aa		13.71	□□□□□ -0.21
MAP3K4-208	ENST00000536852	C5	P01031	1676 aa		13.71	□□□□□ -0.21
MAP3K4-208	ENST00000536852	ANKRD1	Q15327	319 aa		13.71	□□□□□ -0.21
MAP3K4-208	ENST00000536852	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.71	□□□□□ -0.21
MAP3K4-208	ENST00000536852	COPRS	Q9NQ92	184 aa		13.71	□□□□□ -0.21
MAP3K4-208	ENST00000536852	TAF6L	Q9Y6J9	622 aa		13.71	□□□□□ -0.21
MAP3K4-208	ENST00000536852	RPS6KB1	P23443	525 aa		13.7	□□□□□ -0.22
MAP3K4-208	ENST00000536852	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.7	□□□□□ -0.22	1e-6	■■□□□ 12.5
MAP3K4-208	ENST00000536852	USP25	Q9UHP3	1055 aa		13.7	□□□□□ -0.22
MAP3K4-208	ENST00000536852	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.7	□□□□□ -0.22
MAP3K4-208	ENST00000536852	SCN11A	Q9UI33	1791 aa		13.7	□□□□□ -0.22
MAP3K4-208	ENST00000536852	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.7	□□□□□ -0.22
MAP3K4-208	ENST00000536852	UBE3B	Q7Z3V4	1068 aa		13.7	□□□□□ -0.22
MAP3K4-208	ENST00000536852	DBNL	Q9UJU6	430 aa	Known RBP	13.7	□□□□□ -0.22
MAP3K4-208	ENST00000536852	MEGF6	O75095	1541 aa		13.7	□□□□□ -0.22
MAP3K4-208	ENST00000536852	ATP5J	P18859	108 aa		13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	PDC	P20941	246 aa		13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	PTPN12	Q05209	780 aa	Known RBP	13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	TFCP2	Q12800	502 aa		13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	TNNI3K	Q59H18	835 aa		13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	GIMAP6	Q6P9H5	292 aa		13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	LRP10	Q7Z4F1	713 aa		13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	HMG20B	Q9P0W2	317 aa		13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	FPGT-TNNI3K	V9GXZ4	949 aa		13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	MRC1	P22897	1456 aa		13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	KIF1A	Q12756	1690 aa		13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	RRP9	O43818	475 aa	Known RBP	13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	TAF5L	O75529	589 aa		13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	PDIA4	P13667	645 aa	Known RBP	13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	RFX5	P48382	616 aa	Predicted RBP	13.69	□□□□□ -0.22
MAP3K4-208	ENST00000536852	FERMT3	Q86UX7	667 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms