RNA–Protein interactions for RNA: ENST00000534610.5

ATG13-222, Transcript of autophagy related 13, human

TSL 5

Gene ATG13, Length 1,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG13-222	ENST00000534610	PLEKHM2	Q8IWE5	1019 aa		18.97	■□□□□ 0.63
ATG13-222	ENST00000534610	KIF1BP	Q96EK5	621 aa		18.97	■□□□□ 0.63
ATG13-222	ENST00000534610	ERVV-1	B6SEH8	477 aa		18.96	■□□□□ 0.63
ATG13-222	ENST00000534610		H7C1W4	665 aa		18.96	■□□□□ 0.63
ATG13-222	ENST00000534610	CRKL	P46109	303 aa	Known RBP	18.96	■□□□□ 0.63
ATG13-222	ENST00000534610	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.96	■□□□□ 0.63
ATG13-222	ENST00000534610	NOP58	Q9Y2X3	529 aa	Known RBP	18.96	■□□□□ 0.63
ATG13-222	ENST00000534610	COL15A1	P39059	1388 aa		18.96	■□□□□ 0.63
ATG13-222	ENST00000534610	DZIP3	Q86Y13	1208 aa	Known RBP	18.95	■□□□□ 0.62
ATG13-222	ENST00000534610	ISCA1	Q9BUE6	129 aa		18.95	■□□□□ 0.62
ATG13-222	ENST00000534610	UPF2	Q9HAU5	1272 aa	Known RBP	18.95	■□□□□ 0.62
ATG13-222	ENST00000534610	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.95	■□□□□ 0.62
ATG13-222	ENST00000534610	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.95	■□□□□ 0.62
ATG13-222	ENST00000534610	EIF5B	O60841	1220 aa	Known RBP	18.94	■□□□□ 0.62
ATG13-222	ENST00000534610	EIF5	P55010	431 aa	Known RBP	18.94	■□□□□ 0.62
ATG13-222	ENST00000534610	INTS5	Q6P9B9	1019 aa	Known RBP	18.94	■□□□□ 0.62
ATG13-222	ENST00000534610	RHPN1	Q8TCX5	695 aa		18.94	■□□□□ 0.62
ATG13-222	ENST00000534610	KAZALD1	Q96I82	304 aa		18.94	■□□□□ 0.62
ATG13-222	ENST00000534610	LRRC4B	Q9NT99	713 aa		18.94	■□□□□ 0.62
ATG13-222	ENST00000534610	ITPK1	Q13572	414 aa		18.93	■□□□□ 0.62
ATG13-222	ENST00000534610	TJP1	Q07157	1748 aa		18.93	■□□□□ 0.62
ATG13-222	ENST00000534610	AFDN	P55196	1824 aa	Known RBP	18.92	■□□□□ 0.62
ATG13-222	ENST00000534610	CASP7	P55210	303 aa		18.92	■□□□□ 0.62
ATG13-222	ENST00000534610	RABL6	Q3YEC7	729 aa	Predicted RBP	18.92	■□□□□ 0.62
ATG13-222	ENST00000534610	TTC22	Q5TAA0	569 aa		18.92	■□□□□ 0.62
ATG13-222	ENST00000534610	JARID2	Q92833	1246 aa	Predicted RBP	18.92	■□□□□ 0.62
ATG13-222	ENST00000534610	OSBPL3	Q9H4L5	887 aa		18.92	■□□□□ 0.62
ATG13-222	ENST00000534610	TBC1D2B	Q9UPU7	963 aa		18.92	■□□□□ 0.62
ATG13-222	ENST00000534610	PCCA	P05165	728 aa	Predicted RBP	18.91	■□□□□ 0.62
ATG13-222	ENST00000534610	KCNQ4	P56696	695 aa		18.9	■□□□□ 0.62
ATG13-222	ENST00000534610	CLASRP	Q8N2M8	674 aa	Known RBP	18.9	■□□□□ 0.62
ATG13-222	ENST00000534610	MX1	P20591	662 aa		18.89	■□□□□ 0.61
ATG13-222	ENST00000534610	PDE1A	P54750	535 aa		18.89	■□□□□ 0.61
ATG13-222	ENST00000534610	HLF	Q16534	295 aa		18.89	■□□□□ 0.61
ATG13-222	ENST00000534610	ZNF827	Q17R98	1081 aa		18.89	■□□□□ 0.61
ATG13-222	ENST00000534610	QSER1	Q2KHR3	1735 aa		18.89	■□□□□ 0.61
ATG13-222	ENST00000534610	EPHA10	Q5JZY3	1008 aa		18.89	■□□□□ 0.61
ATG13-222	ENST00000534610	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.89	■□□□□ 0.61
ATG13-222	ENST00000534610	CIC	Q96RK0	1608 aa	Predicted RBP	18.89	■□□□□ 0.61
ATG13-222	ENST00000534610	RC3H1	Q5TC82	1133 aa	Known RBP	18.89	■□□□□ 0.61
ATG13-222	ENST00000534610	LMBR1L	Q6UX01	489 aa		18.89	■□□□□ 0.61
ATG13-222	ENST00000534610	IL1RAPL2	Q9NP60	686 aa		18.89	■□□□□ 0.61
ATG13-222	ENST00000534610	PA2G4	Q9UQ80	394 aa	Known RBP	18.89	■□□□□ 0.61
ATG13-222	ENST00000534610	CHMP3	Q9Y3E7	222 aa		18.89	■□□□□ 0.61
ATG13-222	ENST00000534610	TAF1L	Q8IZX4	1826 aa		18.88	■□□□□ 0.61
ATG13-222	ENST00000534610	SLC15A2	Q16348	729 aa		18.88	■□□□□ 0.61
ATG13-222	ENST00000534610	RTL5	Q5HYW3	569 aa	Predicted RBP	18.88	■□□□□ 0.61
ATG13-222	ENST00000534610	CASC1	Q6TDU7	716 aa		18.88	■□□□□ 0.61
ATG13-222	ENST00000534610	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.88	■□□□□ 0.61
ATG13-222	ENST00000534610	COPRS	Q9NQ92	184 aa		18.88	■□□□□ 0.61
ATG13-222	ENST00000534610	CCNL1	Q9UK58	526 aa	Predicted RBP	18.88	■□□□□ 0.61
ATG13-222	ENST00000534610	ZNF652	Q9Y2D9	606 aa		18.88	■□□□□ 0.61
ATG13-222	ENST00000534610	ZNF831	Q5JPB2	1677 aa		18.88	■□□□□ 0.61
ATG13-222	ENST00000534610	CNTNAP4	Q9C0A0	1308 aa		18.88	■□□□□ 0.61
ATG13-222	ENST00000534610	HMGB2	P26583	209 aa	Known RBP	18.87	■□□□□ 0.61
ATG13-222	ENST00000534610	FOXO4	P98177	505 aa		18.87	■□□□□ 0.61
ATG13-222	ENST00000534610	NLRP10	Q86W26	655 aa		18.87	■□□□□ 0.61
ATG13-222	ENST00000534610	STAP2	Q9UGK3	403 aa		18.87	■□□□□ 0.61
ATG13-222	ENST00000534610	AOX1	Q06278	1338 aa		18.87	■□□□□ 0.61
ATG13-222	ENST00000534610	CDC45	O75419	566 aa		18.86	■□□□□ 0.61
ATG13-222	ENST00000534610	GPT	P24298	496 aa		18.86	■□□□□ 0.61
ATG13-222	ENST00000534610	LINC00116	Q8NCU8	138 aa		18.86	■□□□□ 0.61
ATG13-222	ENST00000534610	GPATCH3	Q96I76	525 aa		18.86	■□□□□ 0.61
ATG13-222	ENST00000534610	IFIT2	P09913	472 aa	Known RBP	18.85	■□□□□ 0.61
ATG13-222	ENST00000534610	ZNF34	Q8IZ26	560 aa		18.85	■□□□□ 0.61
ATG13-222	ENST00000534610	TRMT112	Q9UI30	125 aa	Known RBP	18.85	■□□□□ 0.61
ATG13-222	ENST00000534610	CDHR2	Q9BYE9	1310 aa		18.85	■□□□□ 0.61
ATG13-222	ENST00000534610	HSP90B1	P14625	803 aa	Known RBP	18.85	■□□□□ 0.61
ATG13-222	ENST00000534610	GSPT1	P15170	499 aa	Known RBP	18.85	■□□□□ 0.61
ATG13-222	ENST00000534610	PARP10	Q53GL7	1025 aa		18.85	■□□□□ 0.61
ATG13-222	ENST00000534610	FAM89A	Q96GI7	184 aa		18.85	■□□□□ 0.61
ATG13-222	ENST00000534610	PLA2G12B	Q9BX93	195 aa		18.85	■□□□□ 0.61
ATG13-222	ENST00000534610	SIL1	Q9H173	461 aa		18.85	■□□□□ 0.61
ATG13-222	ENST00000534610	CLEC4G	Q6UXB4	293 aa		18.84	■□□□□ 0.61
ATG13-222	ENST00000534610	NUTM1	Q86Y26	1132 aa		18.84	■□□□□ 0.61
ATG13-222	ENST00000534610	DDRGK1	Q96HY6	314 aa		18.84	■□□□□ 0.61
ATG13-222	ENST00000534610	SALL3	Q9BXA9	1300 aa		18.84	■□□□□ 0.61
ATG13-222	ENST00000534610	COL24A1	Q17RW2	1714 aa		18.84	■□□□□ 0.61
ATG13-222	ENST00000534610	RGL2	O15211	777 aa		18.83	■□□□□ 0.61
ATG13-222	ENST00000534610	CAMTA2	O94983	1202 aa		18.83	■□□□□ 0.61
ATG13-222	ENST00000534610	ZBTB7A	O95365	584 aa		18.83	■□□□□ 0.61
ATG13-222	ENST00000534610	RFX5	P48382	616 aa	Predicted RBP	18.83	■□□□□ 0.61
ATG13-222	ENST00000534610	PTPN12	Q05209	780 aa	Known RBP	18.83	■□□□□ 0.61
ATG13-222	ENST00000534610	CCDC57	Q2TAC2	916 aa		18.83	■□□□□ 0.61
ATG13-222	ENST00000534610	AKT1S1	Q96B36	256 aa		18.83	■□□□□ 0.61
ATG13-222	ENST00000534610	STK32B	Q9NY57	414 aa		18.83	■□□□□ 0.61
ATG13-222	ENST00000534610	ERC2	O15083	957 aa		18.82	■□□□□ 0.6
ATG13-222	ENST00000534610	RPS6KA4	O75676	772 aa		18.82	■□□□□ 0.6
ATG13-222	ENST00000534610	SEC24B	O95487	1268 aa		18.82	■□□□□ 0.6
ATG13-222	ENST00000534610	SDS	P20132	328 aa		18.82	■□□□□ 0.6
ATG13-222	ENST00000534610	PTGER2	P43116	358 aa		18.82	■□□□□ 0.6
ATG13-222	ENST00000534610	TTC41P	Q6P2S7	1318 aa		18.82	■□□□□ 0.6
ATG13-222	ENST00000534610	AK7	Q96M32	723 aa		18.82	■□□□□ 0.6
ATG13-222	ENST00000534610	IRS4	O14654	1257 aa	Predicted RBP	18.81	■□□□□ 0.6
ATG13-222	ENST00000534610	SASH1	O94885	1247 aa		18.81	■□□□□ 0.6
ATG13-222	ENST00000534610	MFAP1	P55081	439 aa	Known RBP	18.81	■□□□□ 0.6
ATG13-222	ENST00000534610	AACS	Q86V21	672 aa		18.81	■□□□□ 0.6
ATG13-222	ENST00000534610	KLHDC4	Q8TBB5	520 aa		18.81	■□□□□ 0.6
ATG13-222	ENST00000534610	UTP14A	Q9BVJ6	771 aa	Known RBP	18.81	■□□□□ 0.6
ATG13-222	ENST00000534610	SPON1	Q9HCB6	807 aa		18.81	■□□□□ 0.6

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