RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 LIMCH1Q9UPQ0 1083 aa7□□□□□ -1.29
RDX-213ENST00000532461 DDX49Q9Y6V7 483 aaKnown RBP7□□□□□ -1.29
RDX-213ENST00000532461 ECM29Q5VYK3 1845 aa7□□□□□ -1.29
RDX-213ENST00000532461 TRIM6-TRIM34B2RNG4 842 aa7□□□□□ -1.29
RDX-213ENST00000532461 RASEFQ8IZ41 740 aa7□□□□□ -1.29
RDX-213ENST00000532461 RGS22Q8NE09 1264 aa7□□□□□ -1.29
RDX-213ENST00000532461 RILPL2Q969X0 211 aa7□□□□□ -1.29
RDX-213ENST00000532461 IL1RAPL2Q9NP60 686 aa7□□□□□ -1.29
RDX-213ENST00000532461 NRAPQ86VF7 1730 aa6.99□□□□□ -1.29
RDX-213ENST00000532461 APBB1O00213 710 aa6.99□□□□□ -1.29
RDX-213ENST00000532461 ATP5JP18859 108 aa6.99□□□□□ -1.29
RDX-213ENST00000532461 TERF1P54274 439 aa6.99□□□□□ -1.29
RDX-213ENST00000532461 FBXL16Q8N461 479 aa6.99□□□□□ -1.29
RDX-213ENST00000532461 NECTIN2Q92692 538 aa6.99□□□□□ -1.29
RDX-213ENST00000532461 BICC1Q9H694 974 aaKnown RBP6.99□□□□□ -1.29
RDX-213ENST00000532461 ATG3Q9NT62 314 aa6.99□□□□□ -1.29
RDX-213ENST00000532461 SOS2Q07890 1332 aaPredicted RBP6.99□□□□□ -1.29
RDX-213ENST00000532461 PRAMEF22A3QJZ6 481 aa6.99□□□□□ -1.29
RDX-213ENST00000532461 CYP27B1O15528 508 aa6.99□□□□□ -1.29
RDX-213ENST00000532461 SNRPA1P09661 255 aaKnown RBP6.99□□□□□ -1.29
RDX-213ENST00000532461 EIF2S2P20042 333 aaKnown RBP6.99□□□□□ -1.29
RDX-213ENST00000532461 GZF1Q9H116 711 aaPredicted RBP6.99□□□□□ -1.29
RDX-213ENST00000532461 TMEM63CQ9P1W3 806 aa6.99□□□□□ -1.29
RDX-213ENST00000532461 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.99□□□□□ -1.29
RDX-213ENST00000532461 COL16A1Q07092 1604 aaPredicted RBP6.99□□□□□ -1.29
RDX-213ENST00000532461 BCORQ6W2J9 1755 aa6.99□□□□□ -1.29
RDX-213ENST00000532461 CHD4Q14839 1912 aa6.99□□□□□ -1.29
RDX-213ENST00000532461 ERVV-2B6SEH9 535 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 TATP17735 454 aaPredicted RBP6.98□□□□□ -1.29
RDX-213ENST00000532461 MCM5P33992 734 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 NASPP49321 788 aaPredicted RBP6.98□□□□□ -1.29
RDX-213ENST00000532461 CADPS2Q86UW7 1296 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 PROSER2Q86WR7 435 aaPredicted RBP6.98□□□□□ -1.29
RDX-213ENST00000532461 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.98□□□□□ -1.29
RDX-213ENST00000532461 EAF2Q96CJ1 260 aaPredicted RBP6.98□□□□□ -1.29
RDX-213ENST00000532461 HMG20BQ9P0W2 317 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 ABCC12Q96J65 1359 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 ESPNB1AK53 854 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 H7C1W4 665 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 AK2P54819 239 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 ST3GAL1Q11201 340 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 FOXD4L1Q9NU39 408 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.98□□□□□ -1.29
RDX-213ENST00000532461 DISP2A7MBM2 1401 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 ZNF609O15014 1411 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 LETM1O95202 739 aaPredicted RBP6.98□□□□□ -1.29
RDX-213ENST00000532461 ZSCAN22P10073 491 aaPredicted RBP6.98□□□□□ -1.29
RDX-213ENST00000532461 PTH1RQ03431 593 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 C1QBPQ07021 282 aaKnown RBP6.98□□□□□ -1.29
RDX-213ENST00000532461 CWF19L2Q2TBE0 894 aaKnown RBP6.98□□□□□ -1.29
RDX-213ENST00000532461 UVSSAQ2YD98 709 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 PLBD2Q8NHP8 589 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 C9orf78Q9NZ63 289 aaPredicted RBP6.98□□□□□ -1.29
RDX-213ENST00000532461 ELP1O95163 1332 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 WDR17Q8IZU2 1322 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 SH3TC1Q8TE82 1336 aa6.98□□□□□ -1.29
RDX-213ENST00000532461 COL5A3P25940 1745 aaPredicted RBP6.98□□□□□ -1.29
RDX-213ENST00000532461 AHDC1Q5TGY3 1603 aaPredicted RBP6.97□□□□□ -1.29
RDX-213ENST00000532461 ROBO1Q9Y6N7 1651 aa6.97□□□□□ -1.29
RDX-213ENST00000532461 ZNF500O60304 480 aaPredicted RBP6.97□□□□□ -1.29
RDX-213ENST00000532461 PRPF40AO75400 957 aaKnown RBP6.97□□□□□ -1.29
RDX-213ENST00000532461 PTPN12Q05209 780 aaKnown RBP6.97□□□□□ -1.29
RDX-213ENST00000532461 FMNL2Q96PY5 1086 aa6.97□□□□□ -1.29
RDX-213ENST00000532461 RBSNQ9H1K0 784 aa6.97□□□□□ -1.29
RDX-213ENST00000532461 FBXO3Q9UK99 471 aa6.97□□□□□ -1.29
RDX-213ENST00000532461 TIAM2Q8IVF5 1701 aa6.97□□□□□ -1.29
RDX-213ENST00000532461 KIAA1551Q9HCM1 1747 aa6.97□□□□□ -1.29
RDX-213ENST00000532461 FOXO4P98177 505 aa6.97□□□□□ -1.29
RDX-213ENST00000532461 RAPGEF4Q8WZA2 1011 aa6.97□□□□□ -1.29
RDX-213ENST00000532461 ZNF496Q96IT1 587 aaPredicted RBP6.97□□□□□ -1.29
RDX-213ENST00000532461 FUCA2Q9BTY2 467 aa6.97□□□□□ -1.29
RDX-213ENST00000532461 PCDH11XQ9BZA7 1347 aa6.97□□□□□ -1.29
RDX-213ENST00000532461 PCDH11YQ9BZA8 1340 aa6.97□□□□□ -1.29
RDX-213ENST00000532461 CIAO1O76071 339 aa6.96□□□□□ -1.29
RDX-213ENST00000532461 ANKRD13DQ6ZTN6 518 aa6.96□□□□□ -1.29
RDX-213ENST00000532461 FAM184AQ8NB25 1140 aa6.96□□□□□ -1.29
RDX-213ENST00000532461 HAUS7Q99871 368 aa6.96□□□□□ -1.29
RDX-213ENST00000532461 AGXT2Q9BYV1 514 aa6.96□□□□□ -1.29
RDX-213ENST00000532461 RNF39Q9H2S5 420 aa6.96□□□□□ -1.29
RDX-213ENST00000532461 NOL7Q9UMY1 257 aaKnown RBP6.96□□□□□ -1.29
RDX-213ENST00000532461 NSFL1CQ9UNZ2 370 aaKnown RBP6.96□□□□□ -1.29
RDX-213ENST00000532461 IFIT2P09913 472 aaKnown RBP6.96□□□□□ -1.3
RDX-213ENST00000532461 PRIM1P49642 420 aaKnown RBP6.96□□□□□ -1.3
RDX-213ENST00000532461 ANKRD1Q15327 319 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 EPHA10Q5JZY3 1008 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 CREB3L3Q68CJ9 461 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 CAVIN1Q6NZI2 390 aaKnown RBP6.96□□□□□ -1.3
RDX-213ENST00000532461 C14orf37Q86TY3 774 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 NFATC2IPQ8NCF5 419 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.96□□□□□ -1.3
RDX-213ENST00000532461 ATRNO75882 1429 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 SLC27A2O14975 620 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 STX6O43752 255 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 PHF14O94880 888 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 F13A1P00488 732 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 ANXA1P04083 346 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 SYT1P21579 422 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 NEXNQ0ZGT2 675 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 TRIM28Q13263 835 aaKnown RBP6.96□□□□□ -1.3
RDX-213ENST00000532461 G3BP1Q13283 466 aaKnown RBP eCLIP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms