RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 STX6O43752 255 aa9.56□□□□□ -0.88
CSDE1-214ENST00000530886 RBM28Q9NW13 759 aaKnown RBP9.56□□□□□ -0.88
CSDE1-214ENST00000530886 ADAM21Q9UKJ8 722 aa9.56□□□□□ -0.88
CSDE1-214ENST00000530886 KIF3CO14782 793 aa9.55□□□□□ -0.88
CSDE1-214ENST00000530886 POLR3GO15318 223 aaPredicted RBP9.55□□□□□ -0.88
CSDE1-214ENST00000530886 SKILP12757 684 aa9.55□□□□□ -0.88
CSDE1-214ENST00000530886 CASTP20810 708 aaKnown RBP9.55□□□□□ -0.88
CSDE1-214ENST00000530886 CEP85Q6P2H3 762 aa9.55□□□□□ -0.88
CSDE1-214ENST00000530886 GPATCH11Q8N954 259 aa9.55□□□□□ -0.88
CSDE1-214ENST00000530886 IL25Q9H293 177 aa9.55□□□□□ -0.88
CSDE1-214ENST00000530886 LRRC37A3O60309 1634 aa9.55□□□□□ -0.88
CSDE1-214ENST00000530886 SASH3O75995 380 aa9.55□□□□□ -0.88
CSDE1-214ENST00000530886 LEKR1Q6ZMV7 388 aa9.55□□□□□ -0.88
CSDE1-214ENST00000530886 EP400NLQ6ZTU2 488 aa9.55□□□□□ -0.88
CSDE1-214ENST00000530886 TTC14Q96N46 770 aa9.55□□□□□ -0.88
CSDE1-214ENST00000530886 NUP62CLQ9H1M0 184 aa9.55□□□□□ -0.88
CSDE1-214ENST00000530886 SGSM2O43147 1006 aa9.55□□□□□ -0.88
CSDE1-214ENST00000530886 TADA3O75528 432 aa9.55□□□□□ -0.88
CSDE1-214ENST00000530886 CC2D1AQ6P1N0 951 aaPredicted RBP9.55□□□□□ -0.88
CSDE1-214ENST00000530886 A1CFQ9NQ94 594 aaKnown RBP9.55□□□□□ -0.88
CSDE1-214ENST00000530886 TOMM22Q9NS69 142 aa9.55□□□□□ -0.88
CSDE1-214ENST00000530886 C21orf2O43822 256 aa9.54□□□□□ -0.88
CSDE1-214ENST00000530886 GSDMDP57764 484 aa9.54□□□□□ -0.88
CSDE1-214ENST00000530886 AKAP12Q02952 1782 aa9.54□□□□□ -0.88
CSDE1-214ENST00000530886 C11orf91Q3C1V1 193 aa9.54□□□□□ -0.88
CSDE1-214ENST00000530886 ESYT1Q9BSJ8 1104 aa9.54□□□□□ -0.88
CSDE1-214ENST00000530886 TTC41PQ6P2S7 1318 aa9.54□□□□□ -0.88
CSDE1-214ENST00000530886 PPP1R12AO14974 1030 aaPredicted RBP9.54□□□□□ -0.88
CSDE1-214ENST00000530886 SNW1Q13573 536 aaKnown RBP9.54□□□□□ -0.88
CSDE1-214ENST00000530886 ANO6Q4KMQ2 910 aa9.54□□□□□ -0.88
CSDE1-214ENST00000530886 RPAP2Q8IXW5 612 aaPredicted RBP9.54□□□□□ -0.88
CSDE1-214ENST00000530886 OSBPL5Q9H0X9 879 aaPredicted RBP9.54□□□□□ -0.88
CSDE1-214ENST00000530886 DDX19AQ9NUU7 478 aaKnown RBP9.54□□□□□ -0.88
CSDE1-214ENST00000530886 IMPACTQ9P2X3 320 aa9.54□□□□□ -0.88
CSDE1-214ENST00000530886 C3P01024 1663 aa9.54□□□□□ -0.88
CSDE1-214ENST00000530886 SYT1P21579 422 aa9.54□□□□□ -0.88
CSDE1-214ENST00000530886 MAP2K2P36507 400 aa9.54□□□□□ -0.88
CSDE1-214ENST00000530886 TDO2P48775 406 aa9.54□□□□□ -0.88
CSDE1-214ENST00000530886 ANKRD20A12PQ8NF67 263 aa9.54□□□□□ -0.88
CSDE1-214ENST00000530886 STAG1Q8WVM7 1258 aa9.54□□□□□ -0.88
CSDE1-214ENST00000530886 MAP2K7O14733 419 aa9.53□□□□□ -0.88
CSDE1-214ENST00000530886 UBXN4Q92575 508 aa9.53□□□□□ -0.88
CSDE1-214ENST00000530886 UTP14AQ9BVJ6 771 aaKnown RBP9.53□□□□□ -0.88
CSDE1-214ENST00000530886 TTC21AQ8NDW8 1320 aa9.53□□□□□ -0.88
CSDE1-214ENST00000530886 RIMBP3CA6NJZ7 1639 aa9.53□□□□□ -0.88
CSDE1-214ENST00000530886 RIMBP3BA6NNM3 1639 aa9.53□□□□□ -0.88
CSDE1-214ENST00000530886 RIMBP3Q9UFD9 1639 aa9.53□□□□□ -0.88
CSDE1-214ENST00000530886 SART3Q15020 963 aaKnown RBP9.53□□□□□ -0.88
CSDE1-214ENST00000530886 GPR161Q8N6U8 529 aaKnown RBP9.53□□□□□ -0.88
CSDE1-214ENST00000530886 FAM107BQ9H098 131 aa9.53□□□□□ -0.88
CSDE1-214ENST00000530886 CCDC69A6NI79 296 aa9.52□□□□□ -0.88
CSDE1-214ENST00000530886 ZRSR1Q15695 479 aaKnown RBP9.52□□□□□ -0.88
CSDE1-214ENST00000530886 JAKMIP3Q5VZ66 844 aa9.52□□□□□ -0.88
CSDE1-214ENST00000530886 LRRN4CLQ8ND94 238 aa9.52□□□□□ -0.88
CSDE1-214ENST00000530886 TBC1D22AQ8WUA7 517 aa9.52□□□□□ -0.88
CSDE1-214ENST00000530886 FUT8Q9BYC5 575 aa9.52□□□□□ -0.88
CSDE1-214ENST00000530886 CLSTN2Q9H4D0 955 aa9.52□□□□□ -0.88
CSDE1-214ENST00000530886 MBIPQ9NS73 344 aa9.52□□□□□ -0.88
CSDE1-214ENST00000530886 NALCNQ8IZF0 1738 aa9.52□□□□□ -0.88
CSDE1-214ENST00000530886 A0A087WUV0 522 aaPredicted RBP9.52□□□□□ -0.89
CSDE1-214ENST00000530886 PATL2C9JE40 543 aaKnown RBP9.52□□□□□ -0.89
CSDE1-214ENST00000530886 FYB1O15117 783 aa9.52□□□□□ -0.89
CSDE1-214ENST00000530886 ST3GAL1Q11201 340 aa9.52□□□□□ -0.89
CSDE1-214ENST00000530886 IQCB1Q15051 598 aa9.52□□□□□ -0.89
CSDE1-214ENST00000530886 PPP1R13BQ96KQ4 1090 aa9.52□□□□□ -0.89
CSDE1-214ENST00000530886 API5Q9BZZ5 524 aaKnown RBP9.52□□□□□ -0.89
CSDE1-214ENST00000530886 CCP110O43303 1012 aa9.52□□□□□ -0.89
CSDE1-214ENST00000530886 FIBPO43427 364 aa9.52□□□□□ -0.89
CSDE1-214ENST00000530886 CALRP27797 417 aaKnown RBP9.52□□□□□ -0.89
CSDE1-214ENST00000530886 E4F1Q66K89 784 aaPredicted RBP9.52□□□□□ -0.89
CSDE1-214ENST00000530886 HOMEZQ8IX15 550 aa9.52□□□□□ -0.89
CSDE1-214ENST00000530886 PHACTR3Q96KR7 559 aa9.52□□□□□ -0.89
CSDE1-214ENST00000530886 DNAI1Q9UI46 699 aa9.52□□□□□ -0.89
CSDE1-214ENST00000530886 FCHSD2O94868 740 aa9.51□□□□□ -0.89
CSDE1-214ENST00000530886 LMAN1P49257 510 aa9.51□□□□□ -0.89
CSDE1-214ENST00000530886 MAP2K1Q02750 393 aaPredicted RBP9.51□□□□□ -0.89
CSDE1-214ENST00000530886 BSDC1Q9NW68 430 aaPredicted RBP9.51□□□□□ -0.89
CSDE1-214ENST00000530886 NPATQ14207 1427 aa9.51□□□□□ -0.89
CSDE1-214ENST00000530886 RIMS2Q9UQ26 1411 aa9.51□□□□□ -0.89
CSDE1-214ENST00000530886 LRRFIP1Q32MZ4 808 aaKnown RBP9.51□□□□□ -0.89
CSDE1-214ENST00000530886 TADA2BQ86TJ2 420 aa9.51□□□□□ -0.89
CSDE1-214ENST00000530886 C8orf58Q8NAV2 365 aa9.51□□□□□ -0.89
CSDE1-214ENST00000530886 HNRNPLLQ8WVV9 542 aaKnown RBP9.51□□□□□ -0.89
CSDE1-214ENST00000530886 ZCCHC17Q9NP64 241 aaKnown RBP9.51□□□□□ -0.89
CSDE1-214ENST00000530886 MTMR6Q9Y217 621 aa9.51□□□□□ -0.89
CSDE1-214ENST00000530886 ADCY9O60503 1353 aa9.51□□□□□ -0.89
CSDE1-214ENST00000530886 HSPA4P34932 840 aa9.51□□□□□ -0.89
CSDE1-214ENST00000530886 ZNF165P49910 485 aa9.51□□□□□ -0.89
CSDE1-214ENST00000530886 PDE1AP54750 535 aa9.51□□□□□ -0.89
CSDE1-214ENST00000530886 TNMDQ9H2S6 317 aa9.51□□□□□ -0.89
CSDE1-214ENST00000530886 TMEM131LA2VDJ0 1609 aa9.5□□□□□ -0.89
CSDE1-214ENST00000530886 USP8P40818 1118 aa9.5□□□□□ -0.89
CSDE1-214ENST00000530886 EIF5P55010 431 aaKnown RBP9.5□□□□□ -0.89
CSDE1-214ENST00000530886 ETF1P62495 437 aaKnown RBP9.5□□□□□ -0.89
CSDE1-214ENST00000530886 KRT24Q2M2I5 525 aa9.5□□□□□ -0.89
CSDE1-214ENST00000530886 RSRC2Q7L4I2 434 aaKnown RBP9.5□□□□□ -0.89
CSDE1-214ENST00000530886 JMYQ8N9B5 988 aa9.5□□□□□ -0.89
CSDE1-214ENST00000530886 PRAM1Q96QH2 718 aa9.5□□□□□ -0.89
CSDE1-214ENST00000530886 ARFGAP3Q9NP61 516 aa9.5□□□□□ -0.89
CSDE1-214ENST00000530886 DNM1Q05193 864 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms