RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 GSPT1P15170 499 aaKnown RBP15.66■□□□□ 0.1
ATG13-211ENST00000528494 TCIRG1Q13488 830 aa15.66■□□□□ 0.1
ATG13-211ENST00000528494 BMP2KLQ5H9B9 411 aa15.66■□□□□ 0.1
ATG13-211ENST00000528494 INTS5Q6P9B9 1019 aaKnown RBP15.66■□□□□ 0.1
ATG13-211ENST00000528494 SMARCC1Q92922 1105 aaPredicted RBP15.66■□□□□ 0.1
ATG13-211ENST00000528494 DZIP3Q86Y13 1208 aaKnown RBP15.65■□□□□ 0.1
ATG13-211ENST00000528494 NUTM1Q86Y26 1132 aa15.65■□□□□ 0.1
ATG13-211ENST00000528494 RHPN1Q8TCX5 695 aa15.65■□□□□ 0.1
ATG13-211ENST00000528494 CCDC87Q9NVE4 849 aa15.65■□□□□ 0.1
ATG13-211ENST00000528494 CHMP3Q9Y3E7 222 aa15.65■□□□□ 0.1
ATG13-211ENST00000528494 MAP3K15Q6ZN16 1313 aa15.65■□□□□ 0.1
ATG13-211ENST00000528494 CCDC191Q8NCU4 936 aa15.65■□□□□ 0.1
ATG13-211ENST00000528494 ARFGEF2Q9Y6D5 1785 aa15.64■□□□□ 0.09
ATG13-211ENST00000528494 H7C1W4 665 aa15.64■□□□□ 0.09
ATG13-211ENST00000528494 IL6STP40189 918 aaPredicted RBP15.64■□□□□ 0.09
ATG13-211ENST00000528494 CASP7P55210 303 aa15.64■□□□□ 0.09
ATG13-211ENST00000528494 SMIM5Q71RC9 77 aa15.64■□□□□ 0.09
ATG13-211ENST00000528494 FAM89AQ96GI7 184 aa15.64■□□□□ 0.09
ATG13-211ENST00000528494 ATRNO75882 1429 aa15.63■□□□□ 0.09
ATG13-211ENST00000528494 ONECUT3O60422 494 aaPredicted RBP15.63■□□□□ 0.09
ATG13-211ENST00000528494 RAB11FIP3O75154 756 aa15.63■□□□□ 0.09
ATG13-211ENST00000528494 PDE1AP54750 535 aa15.63■□□□□ 0.09
ATG13-211ENST00000528494 MFAP1P55081 439 aaKnown RBP15.63■□□□□ 0.09
ATG13-211ENST00000528494 TTC22Q5TAA0 569 aa15.63■□□□□ 0.09
ATG13-211ENST00000528494 LMBR1LQ6UX01 489 aa15.63■□□□□ 0.09
ATG13-211ENST00000528494 GIGYF2Q6Y7W6 1299 aaKnown RBP15.63■□□□□ 0.09
ATG13-211ENST00000528494 ISCA1Q9BUE6 129 aa15.63■□□□□ 0.09
ATG13-211ENST00000528494 SYNE4Q8N205 404 aa15.63■□□□□ 0.09
ATG13-211ENST00000528494 KIF1BPQ96EK5 621 aa15.63■□□□□ 0.09
ATG13-211ENST00000528494 MX1P20591 662 aa15.62■□□□□ 0.09
ATG13-211ENST00000528494 EIF5P55010 431 aaKnown RBP15.62■□□□□ 0.09
ATG13-211ENST00000528494 LINC00116Q8NCU8 138 aa15.62■□□□□ 0.09
ATG13-211ENST00000528494 FSD2A1L4K1 749 aa15.62■□□□□ 0.09
ATG13-211ENST00000528494 G3BP1Q13283 466 aaKnown RBP eCLIP15.62■□□□□ 0.09
ATG13-211ENST00000528494 HSP90AB4PQ58FF6 505 aa15.62■□□□□ 0.09
ATG13-211ENST00000528494 CCDC85AQ96PX6 553 aaPredicted RBP15.62■□□□□ 0.09
ATG13-211ENST00000528494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.62■□□□□ 0.09
ATG13-211ENST00000528494 FOXO4P98177 505 aa15.61■□□□□ 0.09
ATG13-211ENST00000528494 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.61■□□□□ 0.09
ATG13-211ENST00000528494 FAM177BA6PVY3 158 aa15.61■□□□□ 0.09
ATG13-211ENST00000528494 SDSP20132 328 aa15.61■□□□□ 0.09
ATG13-211ENST00000528494 PDE4CQ08493 712 aa15.61■□□□□ 0.09
ATG13-211ENST00000528494 PANK2Q9BZ23 570 aa15.6■□□□□ 0.09
ATG13-211ENST00000528494 AFDNP55196 1824 aaKnown RBP15.6■□□□□ 0.09
ATG13-211ENST00000528494 TJP1Q07157 1748 aa15.6■□□□□ 0.09
ATG13-211ENST00000528494 THSD7AQ9UPZ6 1657 aa15.6■□□□□ 0.09
ATG13-211ENST00000528494 ESPNB1AK53 854 aa15.6■□□□□ 0.09
ATG13-211ENST00000528494 RABL6Q3YEC7 729 aaPredicted RBP15.6■□□□□ 0.09
ATG13-211ENST00000528494 TBC1D9Q6ZT07 1266 aa15.6■□□□□ 0.09
ATG13-211ENST00000528494 UPF2Q9HAU5 1272 aaKnown RBP15.6■□□□□ 0.09
ATG13-211ENST00000528494 SASH1O94885 1247 aa15.59■□□□□ 0.09
ATG13-211ENST00000528494 NLRP10Q86W26 655 aa15.59■□□□□ 0.09
ATG13-211ENST00000528494 SALL3Q9BXA9 1300 aa15.59■□□□□ 0.09
ATG13-211ENST00000528494 PTPN12Q05209 780 aaKnown RBP15.58■□□□□ 0.09
ATG13-211ENST00000528494 TRIM28Q13263 835 aaKnown RBP15.58■□□□□ 0.09
ATG13-211ENST00000528494 CLASRPQ8N2M8 674 aaKnown RBP15.58■□□□□ 0.09
ATG13-211ENST00000528494 CCNL1Q9UK58 526 aaPredicted RBP15.58■□□□□ 0.09
ATG13-211ENST00000528494 NUP188Q5SRE5 1749 aa15.58■□□□□ 0.09
ATG13-211ENST00000528494 MAP4K4O95819 1239 aaPredicted RBP15.58■□□□□ 0.08
ATG13-211ENST00000528494 RFX5P48382 616 aaPredicted RBP15.58■□□□□ 0.08
ATG13-211ENST00000528494 OSBPL3Q9H4L5 887 aa15.58■□□□□ 0.08
ATG13-211ENST00000528494 TRMT112Q9UI30 125 aaKnown RBP15.58■□□□□ 0.08
ATG13-211ENST00000528494 TRIM6-TRIM34B2RNG4 842 aa15.57■□□□□ 0.08
ATG13-211ENST00000528494 ERVV-1B6SEH8 477 aa15.57■□□□□ 0.08
ATG13-211ENST00000528494 HSP90AB3PQ58FF7 597 aa15.57■□□□□ 0.08
ATG13-211ENST00000528494 ZBTB38Q8NAP3 1195 aaPredicted RBP15.57■□□□□ 0.08
ATG13-211ENST00000528494 ZNF594Q96JF6 807 aaPredicted RBP15.57■□□□□ 0.08
ATG13-211ENST00000528494 BECN1Q14457 450 aa15.57■□□□□ 0.08
ATG13-211ENST00000528494 AACSQ86V21 672 aa15.57■□□□□ 0.08
ATG13-211ENST00000528494 ERC1Q8IUD2 1116 aa15.57■□□□□ 0.08
ATG13-211ENST00000528494 RILPL2Q969X0 211 aa15.57■□□□□ 0.08
ATG13-211ENST00000528494 UBN2Q6ZU65 1347 aa15.56■□□□□ 0.08
ATG13-211ENST00000528494 CDC45O75419 566 aa15.56■□□□□ 0.08
ATG13-211ENST00000528494 PCCAP05165 728 aaPredicted RBP15.56■□□□□ 0.08
ATG13-211ENST00000528494 KRT27Q7Z3Y8 459 aa15.56■□□□□ 0.08
ATG13-211ENST00000528494 CCDC8Q9H0W5 538 aaPredicted RBP15.56■□□□□ 0.08
ATG13-211ENST00000528494 CAMTA2O94983 1202 aa15.56■□□□□ 0.08
ATG13-211ENST00000528494 IFIT2P09913 472 aaKnown RBP15.56■□□□□ 0.08
ATG13-211ENST00000528494 COPRSQ9NQ92 184 aa15.56■□□□□ 0.08
ATG13-211ENST00000528494 TRIM37O94972 964 aa15.55■□□□□ 0.08
ATG13-211ENST00000528494 MRE11P49959 708 aa15.55■□□□□ 0.08
ATG13-211ENST00000528494 EAF2Q96CJ1 260 aaPredicted RBP15.55■□□□□ 0.08
ATG13-211ENST00000528494 STAP2Q9UGK3 403 aa15.55■□□□□ 0.08
ATG13-211ENST00000528494 MYH14Q7Z406 1995 aaKnown RBP15.55■□□□□ 0.08
ATG13-211ENST00000528494 TFCP2Q12800 502 aa15.55■□□□□ 0.08
ATG13-211ENST00000528494 ZNF34Q8IZ26 560 aa15.55■□□□□ 0.08
ATG13-211ENST00000528494 COL15A1P39059 1388 aa15.55■□□□□ 0.08
ATG13-211ENST00000528494 GNPATO15228 680 aa15.54■□□□□ 0.08
ATG13-211ENST00000528494 SLKQ9H2G2 1235 aaPredicted RBP15.54■□□□□ 0.08
ATG13-211ENST00000528494 TLR7Q9NYK1 1049 aaKnown RBP15.54■□□□□ 0.08
ATG13-211ENST00000528494 NIP7Q9Y221 180 aaKnown RBP eCLIP15.54■□□□□ 0.08
ATG13-211ENST00000528494 IRS4O14654 1257 aaPredicted RBP15.54■□□□□ 0.08
ATG13-211ENST00000528494 SUSD4Q5VX71 490 aa15.54■□□□□ 0.08
ATG13-211ENST00000528494 C22orf23Q9BZE7 217 aa15.54■□□□□ 0.08
ATG13-211ENST00000528494 BCL11BQ9C0K0 894 aaPredicted RBP15.54■□□□□ 0.08
ATG13-211ENST00000528494 CCDC57Q2TAC2 916 aa15.53■□□□□ 0.08
ATG13-211ENST00000528494 ZNF772Q68DY9 489 aaPredicted RBP15.53■□□□□ 0.08
ATG13-211ENST00000528494 BICDL1Q6ZP65 573 aa15.53■□□□□ 0.08
ATG13-211ENST00000528494 AMIGO3Q86WK7 504 aa15.53■□□□□ 0.08
ATG13-211ENST00000528494 PI4K2BQ8TCG2 481 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms