RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, human

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BEST1-204	ENST00000524926	MARCH10	Q8NA82	808 aa	Predicted RBP	18.63	■□□□□ 0.57
BEST1-204	ENST00000524926	ANTXR1	Q9H6X2	564 aa		18.63	■□□□□ 0.57
BEST1-204	ENST00000524926	FOXO4	P98177	505 aa		18.63	■□□□□ 0.57
BEST1-204	ENST00000524926	NGLY1	Q96IV0	654 aa		18.63	■□□□□ 0.57
BEST1-204	ENST00000524926	C8orf37	Q96NL8	207 aa		18.63	■□□□□ 0.57
BEST1-204	ENST00000524926	ANO2	Q9NQ90	1003 aa		18.63	■□□□□ 0.57
BEST1-204	ENST00000524926	SLIT2	O94813	1529 aa		18.63	■□□□□ 0.57
BEST1-204	ENST00000524926	RABEP1	Q15276	862 aa		18.62	■□□□□ 0.57
BEST1-204	ENST00000524926	BARGIN	Q6ZT62	677 aa		18.62	■□□□□ 0.57
BEST1-204	ENST00000524926	CD2BP2	O95400	341 aa	Known RBP	18.62	■□□□□ 0.57
BEST1-204	ENST00000524926	ISCA1	Q9BUE6	129 aa		18.62	■□□□□ 0.57
BEST1-204	ENST00000524926	DOT1L	Q8TEK3	1739 aa		18.61	■□□□□ 0.57
BEST1-204	ENST00000524926	ZBTB1	Q9Y2K1	713 aa		18.61	■□□□□ 0.57
BEST1-204	ENST00000524926	AK9	Q5TCS8	1911 aa		18.61	■□□□□ 0.57
BEST1-204	ENST00000524926	NWD2	Q9ULI1	1742 aa		18.6	■□□□□ 0.57
BEST1-204	ENST00000524926	TLR7	Q9NYK1	1049 aa	Known RBP	18.6	■□□□□ 0.57
BEST1-204	ENST00000524926	MAP3K15	Q6ZN16	1313 aa		18.6	■□□□□ 0.57
BEST1-204	ENST00000524926	TFCP2	Q12800	502 aa		18.59	■□□□□ 0.57
BEST1-204	ENST00000524926	FAM98C	Q17RN3	349 aa	Known RBP	18.59	■□□□□ 0.57
BEST1-204	ENST00000524926		K7ELQ4	463 aa	Predicted RBP	18.59	■□□□□ 0.57
BEST1-204	ENST00000524926	HSP90AA1	P07900	732 aa	Known RBP	18.58	■□□□□ 0.57
BEST1-204	ENST00000524926	MCC	P23508	829 aa		18.58	■□□□□ 0.57
BEST1-204	ENST00000524926	TRIM28	Q13263	835 aa	Known RBP	18.58	■□□□□ 0.57
BEST1-204	ENST00000524926	HLF	Q16534	295 aa		18.58	■□□□□ 0.57
BEST1-204	ENST00000524926	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.58	■□□□□ 0.57
BEST1-204	ENST00000524926	IL25	Q9H293	177 aa		18.58	■□□□□ 0.57
BEST1-204	ENST00000524926	JCAD	Q9P266	1359 aa		18.58	■□□□□ 0.56
BEST1-204	ENST00000524926	CWC27	Q6UX04	472 aa	Known RBP	18.58	■□□□□ 0.56
BEST1-204	ENST00000524926	FAM89A	Q96GI7	184 aa		18.57	■□□□□ 0.56
BEST1-204	ENST00000524926	BOLA2	Q9H3K6	86 aa		18.57	■□□□□ 0.56
BEST1-204	ENST00000524926	TJP1	Q07157	1748 aa		18.57	■□□□□ 0.56
BEST1-204	ENST00000524926	FRAT2	O75474	233 aa	Predicted RBP	18.57	■□□□□ 0.56
BEST1-204	ENST00000524926	GPT	P24298	496 aa		18.57	■□□□□ 0.56
BEST1-204	ENST00000524926	ATP6V1A	P38606	617 aa		18.57	■□□□□ 0.56
BEST1-204	ENST00000524926	TNNI3K	Q59H18	835 aa		18.57	■□□□□ 0.56
BEST1-204	ENST00000524926	EVI5L	Q96CN4	794 aa		18.57	■□□□□ 0.56
BEST1-204	ENST00000524926	DIAPH3	Q9NSV4	1193 aa		18.57	■□□□□ 0.56
BEST1-204	ENST00000524926	FPGT-TNNI3K	V9GXZ4	949 aa		18.57	■□□□□ 0.56
BEST1-204	ENST00000524926	TBC1D2B	Q9UPU7	963 aa		18.56	■□□□□ 0.56
BEST1-204	ENST00000524926	SGSM2	O43147	1006 aa		18.55	■□□□□ 0.56
BEST1-204	ENST00000524926	IL6ST	P40189	918 aa	Predicted RBP	18.55	■□□□□ 0.56
BEST1-204	ENST00000524926	MYT1	Q01538	1121 aa		18.55	■□□□□ 0.56
BEST1-204	ENST00000524926	HSP90AB3P	Q58FF7	597 aa		18.55	■□□□□ 0.56
BEST1-204	ENST00000524926	ST18	O60284	1047 aa		18.55	■□□□□ 0.56
BEST1-204	ENST00000524926	PCCA	P05165	728 aa	Predicted RBP	18.55	■□□□□ 0.56
BEST1-204	ENST00000524926	DZIP3	Q86Y13	1208 aa	Known RBP	18.55	■□□□□ 0.56
BEST1-204	ENST00000524926	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.55	■□□□□ 0.56
BEST1-204	ENST00000524926	CHMP5	Q9NZZ3	219 aa		18.55	■□□□□ 0.56
BEST1-204	ENST00000524926	LOC102724428	A0A0B4J2F2	783 aa		18.54	■□□□□ 0.56
BEST1-204	ENST00000524926	SIK1	P57059	783 aa		18.54	■□□□□ 0.56
BEST1-204	ENST00000524926	VPS72	Q15906	364 aa		18.54	■□□□□ 0.56
BEST1-204	ENST00000524926	ZNF594	Q96JF6	807 aa	Predicted RBP	18.54	■□□□□ 0.56
BEST1-204	ENST00000524926	FOXD4L1	Q9NU39	408 aa		18.54	■□□□□ 0.56
BEST1-204	ENST00000524926	KCNQ2	O43526	872 aa		18.54	■□□□□ 0.56
BEST1-204	ENST00000524926	RUFY2	Q8WXA3	655 aa		18.54	■□□□□ 0.56
BEST1-204	ENST00000524926	DBNL	Q9UJU6	430 aa	Known RBP	18.54	■□□□□ 0.56
BEST1-204	ENST00000524926	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.54	■□□□□ 0.56
BEST1-204	ENST00000524926	BCL9L	Q86UU0	1499 aa		18.53	■□□□□ 0.56
BEST1-204	ENST00000524926	CCDC57	Q2TAC2	916 aa		18.53	■□□□□ 0.56
BEST1-204	ENST00000524926	KIAA1211	Q6ZU35	1233 aa		18.53	■□□□□ 0.56
BEST1-204	ENST00000524926	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.53	■□□□□ 0.56
BEST1-204	ENST00000524926	PALD1	Q9ULE6	856 aa		18.53	■□□□□ 0.56
BEST1-204	ENST00000524926	ATG9A	Q7Z3C6	839 aa		18.53	■□□□□ 0.56
BEST1-204	ENST00000524926	NLRP10	Q86W26	655 aa		18.53	■□□□□ 0.56
BEST1-204	ENST00000524926	IL15	P40933	162 aa	Predicted RBP	18.52	■□□□□ 0.56
BEST1-204	ENST00000524926	CRKL	P46109	303 aa	Known RBP	18.52	■□□□□ 0.55
BEST1-204	ENST00000524926	LRRC24	Q50LG9	513 aa		18.52	■□□□□ 0.55
BEST1-204	ENST00000524926	SYNE4	Q8N205	404 aa		18.52	■□□□□ 0.55
BEST1-204	ENST00000524926	DBNDD2	Q9BQY9	259 aa		18.52	■□□□□ 0.55
BEST1-204	ENST00000524926	CCDC87	Q9NVE4	849 aa		18.52	■□□□□ 0.55
BEST1-204	ENST00000524926	ERVV-1	B6SEH8	477 aa		18.51	■□□□□ 0.55
BEST1-204	ENST00000524926	EYA2	O00167	538 aa		18.51	■□□□□ 0.55
BEST1-204	ENST00000524926	EPB41L2	O43491	1005 aa	Known RBP	18.51	■□□□□ 0.55
BEST1-204	ENST00000524926	NEK4	P51957	841 aa		18.51	■□□□□ 0.55
BEST1-204	ENST00000524926	INTS5	Q6P9B9	1019 aa	Known RBP	18.51	■□□□□ 0.55
BEST1-204	ENST00000524926	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.51	■□□□□ 0.55
BEST1-204	ENST00000524926	NEUROD6	Q96NK8	337 aa		18.51	■□□□□ 0.55
BEST1-204	ENST00000524926	USP21	Q9UK80	565 aa		18.51	■□□□□ 0.55
BEST1-204	ENST00000524926	ANAPC15	P60006	121 aa		18.51	■□□□□ 0.55
BEST1-204	ENST00000524926	FSD1	Q9BTV5	496 aa		18.51	■□□□□ 0.55
BEST1-204	ENST00000524926	PALLD	Q8WX93	1383 aa		18.51	■□□□□ 0.55
BEST1-204	ENST00000524926	ATP5J	P18859	108 aa		18.5	■□□□□ 0.55
BEST1-204	ENST00000524926	EIF5	P55010	431 aa	Known RBP	18.5	■□□□□ 0.55
BEST1-204	ENST00000524926	TRMT112	Q9UI30	125 aa	Known RBP	18.5	■□□□□ 0.55
BEST1-204	ENST00000524926	HIP1	O00291	1037 aa		18.5	■□□□□ 0.55
BEST1-204	ENST00000524926	HSPA4	P34932	840 aa		18.5	■□□□□ 0.55
BEST1-204	ENST00000524926	ITPK1	Q13572	414 aa		18.5	■□□□□ 0.55
BEST1-204	ENST00000524926	SMARCC1	Q92922	1105 aa	Predicted RBP	18.5	■□□□□ 0.55
BEST1-204	ENST00000524926	PLA2G12B	Q9BX93	195 aa		18.5	■□□□□ 0.55
BEST1-204	ENST00000524926	LSG1	Q9H089	658 aa	Known RBP	18.5	■□□□□ 0.55
BEST1-204	ENST00000524926	RAD50	Q92878	1312 aa		18.49	■□□□□ 0.55
BEST1-204	ENST00000524926	TIMM10	P62072	90 aa		18.49	■□□□□ 0.55
BEST1-204	ENST00000524926	TAF7L	Q5H9L4	462 aa		18.49	■□□□□ 0.55
BEST1-204	ENST00000524926	PUS3	Q9BZE2	481 aa	Known RBP	18.49	■□□□□ 0.55
BEST1-204	ENST00000524926	SPATA31A6	Q5VVP1	1343 aa		18.49	■□□□□ 0.55
BEST1-204	ENST00000524926	CIAO1	O76071	339 aa		18.49	■□□□□ 0.55
BEST1-204	ENST00000524926	IFIT5	Q13325	482 aa	Known RBP	18.49	■□□□□ 0.55
BEST1-204	ENST00000524926	DDIT3	P35638	169 aa		18.48	■□□□□ 0.55
BEST1-204	ENST00000524926	EDC3	Q96F86	508 aa	Known RBP	18.48	■□□□□ 0.55
BEST1-204	ENST00000524926	CDHR2	Q9BYE9	1310 aa		18.48	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms