RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 IFIT2P09913 472 aaKnown RBP20.62■□□□□ 0.89
SREK1-212ENST00000522912 FNBP4Q8N3X1 1017 aaPredicted RBP20.62■□□□□ 0.89
SREK1-212ENST00000522912 EAF2Q96CJ1 260 aaPredicted RBP20.62■□□□□ 0.89
SREK1-212ENST00000522912 MAP3K15Q6ZN16 1313 aa20.62■□□□□ 0.89
SREK1-212ENST00000522912 TRIM28Q13263 835 aaKnown RBP20.61■□□□□ 0.89
SREK1-212ENST00000522912 ESYT1Q9BSJ8 1104 aa20.61■□□□□ 0.89
SREK1-212ENST00000522912 REC8O95072 547 aa20.61■□□□□ 0.89
SREK1-212ENST00000522912 NBR1Q14596 966 aa20.61■□□□□ 0.89
SREK1-212ENST00000522912 CERKQ8TCT0 537 aa20.6■□□□□ 0.89
SREK1-212ENST00000522912 SNX21Q969T3 373 aa20.6■□□□□ 0.89
SREK1-212ENST00000522912 ARXQ96QS3 562 aa20.6■□□□□ 0.89
SREK1-212ENST00000522912 ECHDC1Q9NTX5 307 aa20.6■□□□□ 0.89
SREK1-212ENST00000522912 GLRX3O76003 335 aaKnown RBP20.6■□□□□ 0.89
SREK1-212ENST00000522912 HLFQ16534 295 aa20.6■□□□□ 0.89
SREK1-212ENST00000522912 GIGYF2Q6Y7W6 1299 aaKnown RBP20.6■□□□□ 0.89
SREK1-212ENST00000522912 CCDC8Q9H0W5 538 aaPredicted RBP20.6■□□□□ 0.89
SREK1-212ENST00000522912 SPATA31A6Q5VVP1 1343 aa20.59■□□□□ 0.89
SREK1-212ENST00000522912 ANKRD36CQ5JPF3 1778 aa20.59■□□□□ 0.89
SREK1-212ENST00000522912 NUP98P52948 1817 aa20.59■□□□□ 0.89
SREK1-212ENST00000522912 KCNQ2O43526 872 aa20.58■□□□□ 0.89
SREK1-212ENST00000522912 TLR7Q9NYK1 1049 aaKnown RBP20.58■□□□□ 0.89
SREK1-212ENST00000522912 GPATCH3Q96I76 525 aa20.58■□□□□ 0.88
SREK1-212ENST00000522912 CHMP3Q9Y3E7 222 aa20.58■□□□□ 0.88
SREK1-212ENST00000522912 IL6STP40189 918 aaPredicted RBP20.57■□□□□ 0.88
SREK1-212ENST00000522912 HSCBQ8IWL3 235 aa20.57■□□□□ 0.88
SREK1-212ENST00000522912 CNTROBQ8N137 903 aa20.57■□□□□ 0.88
SREK1-212ENST00000522912 CICQ96RK0 1608 aaPredicted RBP20.57■□□□□ 0.88
SREK1-212ENST00000522912 LOC102724428A0A0B4J2F2 783 aa20.56■□□□□ 0.88
SREK1-212ENST00000522912 ATP6V1AP38606 617 aa20.56■□□□□ 0.88
SREK1-212ENST00000522912 SIK1P57059 783 aa20.56■□□□□ 0.88
SREK1-212ENST00000522912 TFCP2Q12800 502 aa20.56■□□□□ 0.88
SREK1-212ENST00000522912 INTS5Q6P9B9 1019 aaKnown RBP20.56■□□□□ 0.88
SREK1-212ENST00000522912 MYH14Q7Z406 1995 aaKnown RBP20.56■□□□□ 0.88
SREK1-212ENST00000522912 PCCAP05165 728 aaPredicted RBP20.56■□□□□ 0.88
SREK1-212ENST00000522912 SLKQ9H2G2 1235 aaPredicted RBP20.56■□□□□ 0.88
SREK1-212ENST00000522912 ANTXR1Q9H6X2 564 aa20.56■□□□□ 0.88
SREK1-212ENST00000522912 USP21Q9UK80 565 aa20.56■□□□□ 0.88
SREK1-212ENST00000522912 RREB1Q92766 1687 aa20.56■□□□□ 0.88
SREK1-212ENST00000522912 CD2BP2O95400 341 aaKnown RBP20.55■□□□□ 0.88
SREK1-212ENST00000522912 ITPK1Q13572 414 aa20.55■□□□□ 0.88
SREK1-212ENST00000522912 PALLDQ8WX93 1383 aa20.55■□□□□ 0.88
SREK1-212ENST00000522912 IL25Q9H293 177 aa20.55■□□□□ 0.88
SREK1-212ENST00000522912 FAM89AQ96GI7 184 aa20.54■□□□□ 0.88
SREK1-212ENST00000522912 TBC1D2BQ9UPU7 963 aa20.54■□□□□ 0.88
SREK1-212ENST00000522912 GPTP24298 496 aa20.54■□□□□ 0.88
SREK1-212ENST00000522912 CRKLP46109 303 aaKnown RBP20.54■□□□□ 0.88
SREK1-212ENST00000522912 EIF5P55010 431 aaKnown RBP20.54■□□□□ 0.88
SREK1-212ENST00000522912 NLRP10Q86W26 655 aa20.54■□□□□ 0.88
SREK1-212ENST00000522912 DZIP3Q86Y13 1208 aaKnown RBP20.54■□□□□ 0.88
SREK1-212ENST00000522912 ZBTB38Q8NAP3 1195 aaPredicted RBP20.54■□□□□ 0.88
SREK1-212ENST00000522912 SPRYD3Q8NCJ5 442 aa20.54■□□□□ 0.88
SREK1-212ENST00000522912 CCDC87Q9NVE4 849 aa20.54■□□□□ 0.88
SREK1-212ENST00000522912 ERVV-1B6SEH8 477 aa20.53■□□□□ 0.88
SREK1-212ENST00000522912 HSP90AB3PQ58FF7 597 aa20.53■□□□□ 0.88
SREK1-212ENST00000522912 TNNI3KQ59H18 835 aa20.53■□□□□ 0.88
SREK1-212ENST00000522912 ATG9AQ7Z3C6 839 aa20.53■□□□□ 0.88
SREK1-212ENST00000522912 FPGT-TNNI3KV9GXZ4 949 aa20.53■□□□□ 0.88
SREK1-212ENST00000522912 RABEP1Q15276 862 aa20.53■□□□□ 0.88
SREK1-212ENST00000522912 SYNE4Q8N205 404 aa20.53■□□□□ 0.88
SREK1-212ENST00000522912 PLA2G12BQ9BX93 195 aa20.53■□□□□ 0.88
SREK1-212ENST00000522912 SMARCC1Q92922 1105 aaPredicted RBP20.52■□□□□ 0.88
SREK1-212ENST00000522912 ZNF594Q96JF6 807 aaPredicted RBP20.52■□□□□ 0.88
SREK1-212ENST00000522912 THSD7AQ9UPZ6 1657 aa20.52■□□□□ 0.88
SREK1-212ENST00000522912 HSPA1LP34931 641 aa20.51■□□□□ 0.87
SREK1-212ENST00000522912 ANO2Q9NQ90 1003 aa20.51■□□□□ 0.87
SREK1-212ENST00000522912 DBNLQ9UJU6 430 aaKnown RBP20.51■□□□□ 0.87
SREK1-212ENST00000522912 COL5A3P25940 1745 aaPredicted RBP20.51■□□□□ 0.87
SREK1-212ENST00000522912 CDHR2Q9BYE9 1310 aa20.5■□□□□ 0.87
SREK1-212ENST00000522912 SGSM2O43147 1006 aa20.5■□□□□ 0.87
SREK1-212ENST00000522912 AEBP2Q6ZN18 517 aaPredicted RBP20.5■□□□□ 0.87
SREK1-212ENST00000522912 EVI5LQ96CN4 794 aa20.5■□□□□ 0.87
SREK1-212ENST00000522912 MYT1Q01538 1121 aa20.49■□□□□ 0.87
SREK1-212ENST00000522912 LRRC24Q50LG9 513 aa20.49■□□□□ 0.87
SREK1-212ENST00000522912 BOLA2Q9H3K6 86 aa20.49■□□□□ 0.87
SREK1-212ENST00000522912 ZNF831Q5JPB2 1677 aa20.49■□□□□ 0.87
SREK1-212ENST00000522912 MYH3P11055 1940 aa20.49■□□□□ 0.87
SREK1-212ENST00000522912 EYA2O00167 538 aa20.49■□□□□ 0.87
SREK1-212ENST00000522912 CSF1RP07333 972 aa20.49■□□□□ 0.87
SREK1-212ENST00000522912 ZNF34Q8IZ26 560 aa20.49■□□□□ 0.87
SREK1-212ENST00000522912 IL15P40933 162 aaPredicted RBP20.48■□□□□ 0.87
SREK1-212ENST00000522912 NFKBIBQ15653 356 aa20.48■□□□□ 0.87
SREK1-212ENST00000522912 PTF1AQ7RTS3 328 aa20.48■□□□□ 0.87
SREK1-212ENST00000522912 DBNDD2Q9BQY9 259 aa20.48■□□□□ 0.87
SREK1-212ENST00000522912 UBN2Q6ZU65 1347 aa20.48■□□□□ 0.87
SREK1-212ENST00000522912 CWC27Q6UX04 472 aaKnown RBP20.48■□□□□ 0.87
SREK1-212ENST00000522912 PUS3Q9BZE2 481 aaKnown RBP20.48■□□□□ 0.87
SREK1-212ENST00000522912 K7ELQ4 463 aaPredicted RBP20.47■□□□□ 0.87
SREK1-212ENST00000522912 CIAO1O76071 339 aa20.47■□□□□ 0.87
SREK1-212ENST00000522912 ATP5JP18859 108 aa20.47■□□□□ 0.87
SREK1-212ENST00000522912 MEX3CQ5U5Q3 659 aaKnown RBP20.47■□□□□ 0.87
SREK1-212ENST00000522912 CCDC85AQ96PX6 553 aaPredicted RBP20.47■□□□□ 0.87
SREK1-212ENST00000522912 PALD1Q9ULE6 856 aa20.47■□□□□ 0.87
SREK1-212ENST00000522912 CCDC57Q2TAC2 916 aa20.46■□□□□ 0.87
SREK1-212ENST00000522912 DIAPH3Q9NSV4 1193 aa20.46■□□□□ 0.87
SREK1-212ENST00000522912 TRMT112Q9UI30 125 aaKnown RBP20.46■□□□□ 0.87
SREK1-212ENST00000522912 EPB41L2O43491 1005 aaKnown RBP20.46■□□□□ 0.87
SREK1-212ENST00000522912 GPR108Q9NPR9 543 aa20.46■□□□□ 0.87
SREK1-212ENST00000522912 BTAF1O14981 1849 aa20.45■□□□□ 0.86
SREK1-212ENST00000522912 CAMTA2O94983 1202 aa20.45■□□□□ 0.86
SREK1-212ENST00000522912 LSG1Q9H089 658 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms