RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 AACSQ86V21 672 aa32.95■■■□□ 2.87
COL13A1-212ENST00000520133 ZBTB1Q9Y2K1 713 aa32.95■■■□□ 2.87
COL13A1-212ENST00000520133 IL6STP40189 918 aaPredicted RBP32.95■■■□□ 2.86
COL13A1-212ENST00000520133 FOXO4P98177 505 aa32.95■■■□□ 2.86
COL13A1-212ENST00000520133 PTPN12Q05209 780 aaKnown RBP32.95■■■□□ 2.86
COL13A1-212ENST00000520133 LMBR1LQ6UX01 489 aa32.95■■■□□ 2.86
COL13A1-212ENST00000520133 GIGYF2Q6Y7W6 1299 aaKnown RBP32.95■■■□□ 2.86
COL13A1-212ENST00000520133 USP26Q9BXU7 913 aa32.95■■■□□ 2.86
COL13A1-212ENST00000520133 ECHDC1Q9NTX5 307 aa32.95■■■□□ 2.86
COL13A1-212ENST00000520133 KLHDC4Q8TBB5 520 aa32.94■■■□□ 2.86
COL13A1-212ENST00000520133 CNTROBQ8N137 903 aa32.93■■■□□ 2.86
COL13A1-212ENST00000520133 USP21Q9UK80 565 aa32.93■■■□□ 2.86
COL13A1-212ENST00000520133 SMARCC1Q92922 1105 aaPredicted RBP32.93■■■□□ 2.86
COL13A1-212ENST00000520133 CHMLP26374 656 aa32.92■■■□□ 2.86
COL13A1-212ENST00000520133 ANKRD36CQ5JPF3 1778 aa32.92■■■□□ 2.86
COL13A1-212ENST00000520133 RTL5Q5HYW3 569 aaPredicted RBP32.91■■■□□ 2.86
COL13A1-212ENST00000520133 CICQ96RK0 1608 aaPredicted RBP32.91■■■□□ 2.86
COL13A1-212ENST00000520133 ATP6V1AP38606 617 aa32.91■■■□□ 2.86
COL13A1-212ENST00000520133 HSCBQ8IWL3 235 aa32.91■■■□□ 2.86
COL13A1-212ENST00000520133 KIF2CQ99661 725 aa32.91■■■□□ 2.86
COL13A1-212ENST00000520133 ESYT1Q9BSJ8 1104 aa32.91■■■□□ 2.86
COL13A1-212ENST00000520133 CHMP3Q9Y3E7 222 aa32.91■■■□□ 2.86
COL13A1-212ENST00000520133 LOC102724428A0A0B4J2F2 783 aa32.9■■■□□ 2.86
COL13A1-212ENST00000520133 SIK1P57059 783 aa32.9■■■□□ 2.86
COL13A1-212ENST00000520133 NUP98P52948 1817 aa32.89■■■□□ 2.86
COL13A1-212ENST00000520133 SNX21Q969T3 373 aa32.89■■■□□ 2.86
COL13A1-212ENST00000520133 EAF2Q96CJ1 260 aaPredicted RBP32.89■■■□□ 2.86
COL13A1-212ENST00000520133 PCCAP05165 728 aaPredicted RBP32.88■■■□□ 2.85
COL13A1-212ENST00000520133 PALLDQ8WX93 1383 aa32.88■■■□□ 2.85
COL13A1-212ENST00000520133 ERVV-1B6SEH8 477 aa32.88■■■□□ 2.85
COL13A1-212ENST00000520133 MYT1Q01538 1121 aa32.86■■■□□ 2.85
COL13A1-212ENST00000520133 DZIP3Q86Y13 1208 aaKnown RBP32.86■■■□□ 2.85
COL13A1-212ENST00000520133 CCDC87Q9NVE4 849 aa32.86■■■□□ 2.85
COL13A1-212ENST00000520133 ZBTB38Q8NAP3 1195 aaPredicted RBP32.86■■■□□ 2.85
COL13A1-212ENST00000520133 MAP4K4O95819 1239 aaPredicted RBP32.85■■■□□ 2.85
COL13A1-212ENST00000520133 HLFQ16534 295 aa32.85■■■□□ 2.85
COL13A1-212ENST00000520133 MEX3CQ5U5Q3 659 aaKnown RBP32.85■■■□□ 2.85
COL13A1-212ENST00000520133 CCDC8Q9H0W5 538 aaPredicted RBP32.85■■■□□ 2.85
COL13A1-212ENST00000520133 PLA2G12BQ9BX93 195 aa32.84■■■□□ 2.85
COL13A1-212ENST00000520133 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.84■■■□□ 2.85
COL13A1-212ENST00000520133 RREB1Q92766 1687 aa32.83■■■□□ 2.85
COL13A1-212ENST00000520133 CRKLP46109 303 aaKnown RBP32.83■■■□□ 2.85
COL13A1-212ENST00000520133 EIF5P55010 431 aaKnown RBP32.83■■■□□ 2.85
COL13A1-212ENST00000520133 INTS5Q6P9B9 1019 aaKnown RBP32.83■■■□□ 2.85
COL13A1-212ENST00000520133 ZNF831Q5JPB2 1677 aa32.82■■■□□ 2.84
COL13A1-212ENST00000520133 KCNQ2O43526 872 aa32.82■■■□□ 2.84
COL13A1-212ENST00000520133 NLRP10Q86W26 655 aa32.82■■■□□ 2.84
COL13A1-212ENST00000520133 TFCP2Q12800 502 aa32.81■■■□□ 2.84
COL13A1-212ENST00000520133 RABEP1Q15276 862 aa32.81■■■□□ 2.84
COL13A1-212ENST00000520133 CDHR2Q9BYE9 1310 aa32.81■■■□□ 2.84
COL13A1-212ENST00000520133 EPB41L2O43491 1005 aaKnown RBP32.81■■■□□ 2.84
COL13A1-212ENST00000520133 TNNI3KQ59H18 835 aa32.81■■■□□ 2.84
COL13A1-212ENST00000520133 TBC1D2BQ9UPU7 963 aa32.81■■■□□ 2.84
COL13A1-212ENST00000520133 FPGT-TNNI3KV9GXZ4 949 aa32.81■■■□□ 2.84
COL13A1-212ENST00000520133 THSD7AQ9UPZ6 1657 aa32.81■■■□□ 2.84
COL13A1-212ENST00000520133 EVI5LQ96CN4 794 aa32.8■■■□□ 2.84
COL13A1-212ENST00000520133 FAM89AQ96GI7 184 aa32.8■■■□□ 2.84
COL13A1-212ENST00000520133 GPTP24298 496 aa32.79■■■□□ 2.84
COL13A1-212ENST00000520133 HSPA1LP34931 641 aa32.79■■■□□ 2.84
COL13A1-212ENST00000520133 MYH14Q7Z406 1995 aaKnown RBP32.79■■■□□ 2.84
COL13A1-212ENST00000520133 MCCP23508 829 aa32.79■■■□□ 2.84
COL13A1-212ENST00000520133 IL15P40933 162 aaPredicted RBP32.79■■■□□ 2.84
COL13A1-212ENST00000520133 ITPK1Q13572 414 aa32.79■■■□□ 2.84
COL13A1-212ENST00000520133 CCDC57Q2TAC2 916 aa32.78■■■□□ 2.84
COL13A1-212ENST00000520133 TLR7Q9NYK1 1049 aaKnown RBP32.78■■■□□ 2.84
COL13A1-212ENST00000520133 NBR1Q14596 966 aa32.77■■■□□ 2.84
COL13A1-212ENST00000520133 ANO2Q9NQ90 1003 aa32.77■■■□□ 2.84
COL13A1-212ENST00000520133 MYH3P11055 1940 aa32.77■■■□□ 2.84
COL13A1-212ENST00000520133 COL5A3P25940 1745 aaPredicted RBP32.77■■■□□ 2.84
COL13A1-212ENST00000520133 CIAO1O76071 339 aa32.77■■■□□ 2.84
COL13A1-212ENST00000520133 EYA2O00167 538 aa32.76■■■□□ 2.83
COL13A1-212ENST00000520133 SLKQ9H2G2 1235 aaPredicted RBP32.76■■■□□ 2.83
COL13A1-212ENST00000520133 FBXO3Q9UK99 471 aa32.76■■■□□ 2.83
COL13A1-212ENST00000520133 ATG9AQ7Z3C6 839 aa32.75■■■□□ 2.83
COL13A1-212ENST00000520133 GPR108Q9NPR9 543 aa32.75■■■□□ 2.83
COL13A1-212ENST00000520133 CSF1RP07333 972 aa32.74■■■□□ 2.83
COL13A1-212ENST00000520133 RUFY2Q8WXA3 655 aa32.74■■■□□ 2.83
COL13A1-212ENST00000520133 DIAPH3Q9NSV4 1193 aa32.74■■■□□ 2.83
COL13A1-212ENST00000520133 ZNF34Q8IZ26 560 aa32.74■■■□□ 2.83
COL13A1-212ENST00000520133 GJD4Q96KN9 370 aaPredicted RBP32.74■■■□□ 2.83
COL13A1-212ENST00000520133 DBNLQ9UJU6 430 aaKnown RBP32.74■■■□□ 2.83
COL13A1-212ENST00000520133 SGSM2O43147 1006 aa32.73■■■□□ 2.83
COL13A1-212ENST00000520133 TRMT112Q9UI30 125 aaKnown RBP32.73■■■□□ 2.83
COL13A1-212ENST00000520133 HIP1O00291 1037 aa32.72■■■□□ 2.83
COL13A1-212ENST00000520133 AFF2P51816 1311 aa32.72■■■□□ 2.83
COL13A1-212ENST00000520133 ATP5JP18859 108 aa32.71■■■□□ 2.83
COL13A1-212ENST00000520133 BOLA2Q9H3K6 86 aa32.71■■■□□ 2.83
COL13A1-212ENST00000520133 ANTXR1Q9H6X2 564 aa32.71■■■□□ 2.83
COL13A1-212ENST00000520133 IFIT5Q13325 482 aaKnown RBP32.7■■■□□ 2.83
COL13A1-212ENST00000520133 ZNF594Q96JF6 807 aaPredicted RBP32.7■■■□□ 2.83
COL13A1-212ENST00000520133 K7ELQ4 463 aaPredicted RBP32.7■■■□□ 2.82
COL13A1-212ENST00000520133 ANAPC15P60006 121 aa32.7■■■□□ 2.82
COL13A1-212ENST00000520133 NHSQ6T4R5 1651 aa32.69■■■□□ 2.82
COL13A1-212ENST00000520133 IRS4O14654 1257 aaPredicted RBP32.69■■■□□ 2.82
COL13A1-212ENST00000520133 TAF7LQ5H9L4 462 aa32.69■■■□□ 2.82
COL13A1-212ENST00000520133 CWC27Q6UX04 472 aaKnown RBP32.69■■■□□ 2.82
COL13A1-212ENST00000520133 BTAF1O14981 1849 aa32.69■■■□□ 2.82
COL13A1-212ENST00000520133 LRRC24Q50LG9 513 aa32.68■■■□□ 2.82
COL13A1-212ENST00000520133 KIAA1211Q6ZU35 1233 aa32.68■■■□□ 2.82
COL13A1-212ENST00000520133 CAMTA2O94983 1202 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms