RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SMARCA5O60264 1052 aaPredicted RBP22.26■■□□□ 1.15
SDC2-202ENST00000518385 COPS6Q7L5N1 327 aa22.26■■□□□ 1.15
SDC2-202ENST00000518385 XAGE3Q8WTP9 111 aa22.26■■□□□ 1.15
SDC2-202ENST00000518385 METTL22Q9BUU2 404 aaPredicted RBP22.26■■□□□ 1.15
SDC2-202ENST00000518385 STAP2Q9UGK3 403 aa22.26■■□□□ 1.15
SDC2-202ENST00000518385 SALL3Q9BXA9 1300 aa22.26■■□□□ 1.15
SDC2-202ENST00000518385 GRM8O00222 908 aa22.25■■□□□ 1.15
SDC2-202ENST00000518385 SRGAP3O43295 1099 aa22.25■■□□□ 1.15
SDC2-202ENST00000518385 PIP4K2AP48426 406 aaPredicted RBP22.25■■□□□ 1.15
SDC2-202ENST00000518385 PDE1AP54750 535 aa22.25■■□□□ 1.15
SDC2-202ENST00000518385 AIMP1Q12904 312 aaKnown RBP22.25■■□□□ 1.15
SDC2-202ENST00000518385 FAM182BQ5T319 152 aa22.25■■□□□ 1.15
SDC2-202ENST00000518385 ANKRD13DQ6ZTN6 518 aa22.25■■□□□ 1.15
SDC2-202ENST00000518385 ZNF445P59923 1031 aa22.25■■□□□ 1.15
SDC2-202ENST00000518385 CYP19A1P11511 503 aaPredicted RBP22.24■■□□□ 1.15
SDC2-202ENST00000518385 KIF1BPQ96EK5 621 aa22.24■■□□□ 1.15
SDC2-202ENST00000518385 LOC102724428A0A0B4J2F2 783 aa22.23■■□□□ 1.15
SDC2-202ENST00000518385 APBB1O00213 710 aa22.23■■□□□ 1.15
SDC2-202ENST00000518385 SIK1P57059 783 aa22.23■■□□□ 1.15
SDC2-202ENST00000518385 PALLDQ8WX93 1383 aa22.23■■□□□ 1.15
SDC2-202ENST00000518385 SURF6O75683 361 aaKnown RBP22.22■■□□□ 1.15
SDC2-202ENST00000518385 KRT27Q7Z3Y8 459 aa22.22■■□□□ 1.15
SDC2-202ENST00000518385 OTUD7AQ8TE49 926 aaPredicted RBP22.22■■□□□ 1.15
SDC2-202ENST00000518385 COL15A1P39059 1388 aa22.22■■□□□ 1.15
SDC2-202ENST00000518385 NHSQ6T4R5 1651 aa22.21■■□□□ 1.15
SDC2-202ENST00000518385 SDSP20132 328 aa22.21■■□□□ 1.15
SDC2-202ENST00000518385 MX1P20591 662 aa22.21■■□□□ 1.15
SDC2-202ENST00000518385 PTF1AQ7RTS3 328 aa22.21■■□□□ 1.15
SDC2-202ENST00000518385 ERC1Q8IUD2 1116 aa22.21■■□□□ 1.15
SDC2-202ENST00000518385 PLBD2Q8NHP8 589 aa22.21■■□□□ 1.15
SDC2-202ENST00000518385 NEURL1BA8MQ27 555 aa22.21■■□□□ 1.15
SDC2-202ENST00000518385 ATP6V1AP38606 617 aa22.21■■□□□ 1.15
SDC2-202ENST00000518385 TJP1Q07157 1748 aa22.2■■□□□ 1.15
SDC2-202ENST00000518385 BAG4O95429 457 aaKnown RBP22.2■■□□□ 1.14
SDC2-202ENST00000518385 IGKV5-2P06315 115 aa22.2■■□□□ 1.14
SDC2-202ENST00000518385 RXRBP28702 533 aa22.2■■□□□ 1.14
SDC2-202ENST00000518385 CWF19L2Q2TBE0 894 aaKnown RBP22.2■■□□□ 1.14
SDC2-202ENST00000518385 RHPN1Q8TCX5 695 aa22.2■■□□□ 1.14
SDC2-202ENST00000518385 RGS17Q9UGC6 210 aaPredicted RBP22.2■■□□□ 1.14
SDC2-202ENST00000518385 BRWD3Q6RI45 1802 aa22.19■■□□□ 1.14
SDC2-202ENST00000518385 SBF2Q86WG5 1849 aa22.19■■□□□ 1.14
SDC2-202ENST00000518385 GCKRQ14397 625 aa22.19■■□□□ 1.14
SDC2-202ENST00000518385 FAM196AQ6ZSG2 479 aa22.19■■□□□ 1.14
SDC2-202ENST00000518385 NASPP49321 788 aaPredicted RBP22.18■■□□□ 1.14
SDC2-202ENST00000518385 ZSCAN30Q86W11 494 aa22.18■■□□□ 1.14
SDC2-202ENST00000518385 CICQ96RK0 1608 aaPredicted RBP22.18■■□□□ 1.14
SDC2-202ENST00000518385 ST18O60284 1047 aa22.17■■□□□ 1.14
SDC2-202ENST00000518385 CYP2E1P05181 493 aaPredicted RBP22.17■■□□□ 1.14
SDC2-202ENST00000518385 BCL11BQ9C0K0 894 aaPredicted RBP22.17■■□□□ 1.14
SDC2-202ENST00000518385 ZNF831Q5JPB2 1677 aa22.17■■□□□ 1.14
SDC2-202ENST00000518385 BTAF1O14981 1849 aa22.17■■□□□ 1.14
SDC2-202ENST00000518385 ITPK1Q13572 414 aa22.16■■□□□ 1.14
SDC2-202ENST00000518385 HSP90AA2PQ14568 343 aaPredicted RBP22.16■■□□□ 1.14
SDC2-202ENST00000518385 TTLL7Q6ZT98 887 aa22.16■■□□□ 1.14
SDC2-202ENST00000518385 MYD88Q99836 296 aa22.16■■□□□ 1.14
SDC2-202ENST00000518385 REC8O95072 547 aa22.16■■□□□ 1.14
SDC2-202ENST00000518385 DDX49Q9Y6V7 483 aaKnown RBP22.16■■□□□ 1.14
SDC2-202ENST00000518385 MCM5P33992 734 aa22.15■■□□□ 1.14
SDC2-202ENST00000518385 MCM2P49736 904 aa22.15■■□□□ 1.14
SDC2-202ENST00000518385 INTS5Q6P9B9 1019 aaKnown RBP22.15■■□□□ 1.14
SDC2-202ENST00000518385 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.15■■□□□ 1.14
SDC2-202ENST00000518385 GAS2L3Q86XJ1 694 aa22.15■■□□□ 1.14
SDC2-202ENST00000518385 SUCLG2Q96I99 432 aa22.15■■□□□ 1.14
SDC2-202ENST00000518385 ARFGEF2Q9Y6D5 1785 aa22.14■■□□□ 1.14
SDC2-202ENST00000518385 KLHL34Q8N239 644 aa22.14■■□□□ 1.13
SDC2-202ENST00000518385 CCDC87Q9NVE4 849 aa22.14■■□□□ 1.13
SDC2-202ENST00000518385 ZBTB1Q9Y2K1 713 aa22.14■■□□□ 1.13
SDC2-202ENST00000518385 USP42Q9H9J4 1324 aaKnown RBP22.14■■□□□ 1.13
SDC2-202ENST00000518385 IL6STP40189 918 aaPredicted RBP22.13■■□□□ 1.13
SDC2-202ENST00000518385 CRKLP46109 303 aaKnown RBP22.13■■□□□ 1.13
SDC2-202ENST00000518385 USP26Q9BXU7 913 aa22.13■■□□□ 1.13
SDC2-202ENST00000518385 TTC41PQ6P2S7 1318 aa22.13■■□□□ 1.13
SDC2-202ENST00000518385 TUBGCP6Q96RT7 1819 aa22.12■■□□□ 1.13
SDC2-202ENST00000518385 SSFA2P28290 1259 aa22.12■■□□□ 1.13
SDC2-202ENST00000518385 OS9Q13438 667 aaPredicted RBP22.12■■□□□ 1.13
SDC2-202ENST00000518385 POTEAQ6S8J7 498 aa22.12■■□□□ 1.13
SDC2-202ENST00000518385 KAZALD1Q96I82 304 aa22.12■■□□□ 1.13
SDC2-202ENST00000518385 EPB41L2O43491 1005 aaKnown RBP22.12■■□□□ 1.13
SDC2-202ENST00000518385 CLASRPQ8N2M8 674 aaKnown RBP22.12■■□□□ 1.13
SDC2-202ENST00000518385 ARXQ96QS3 562 aa22.12■■□□□ 1.13
SDC2-202ENST00000518385 BICC1Q9H694 974 aaKnown RBP22.12■■□□□ 1.13
SDC2-202ENST00000518385 ERC2O15083 957 aa22.11■■□□□ 1.13
SDC2-202ENST00000518385 OFD1O75665 1012 aa22.1■■□□□ 1.13
SDC2-202ENST00000518385 MSNP26038 577 aaKnown RBP22.1■■□□□ 1.13
SDC2-202ENST00000518385 EIF5P55010 431 aaKnown RBP22.1■■□□□ 1.13
SDC2-202ENST00000518385 G3BP1Q13283 466 aaKnown RBP eCLIP22.1■■□□□ 1.13
SDC2-202ENST00000518385 KIF6Q6ZMV9 814 aa22.1■■□□□ 1.13
SDC2-202ENST00000518385 ZBTB3Q9H5J0 574 aa22.1■■□□□ 1.13
SDC2-202ENST00000518385 IL1RAPL2Q9NP60 686 aa22.1■■□□□ 1.13
SDC2-202ENST00000518385 ZNF330Q9Y3S2 320 aaPredicted RBP22.1■■□□□ 1.13
SDC2-202ENST00000518385 RREB1Q92766 1687 aa22.1■■□□□ 1.13
SDC2-202ENST00000518385 CD2BP2O95400 341 aaKnown RBP22.09■■□□□ 1.13
SDC2-202ENST00000518385 RABL6Q3YEC7 729 aaPredicted RBP22.09■■□□□ 1.13
SDC2-202ENST00000518385 GPATCH3Q96I76 525 aa22.09■■□□□ 1.13
SDC2-202ENST00000518385 MAP7D2Q96T17 732 aa22.09■■□□□ 1.13
SDC2-202ENST00000518385 NUP188Q5SRE5 1749 aa22.09■■□□□ 1.13
SDC2-202ENST00000518385 AFDNP55196 1824 aaKnown RBP22.09■■□□□ 1.13
SDC2-202ENST00000518385 MAP3K15Q6ZN16 1313 aa22.08■■□□□ 1.13
SDC2-202ENST00000518385 MBD3O95983 291 aa22.08■■□□□ 1.13
SDC2-202ENST00000518385 LINC00116Q8NCU8 138 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms