RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 KIF1BPQ96EK5 621 aa14.75□□□□□ -0.05
LMNA-224ENST00000515711 DDRGK1Q96HY6 314 aa14.75□□□□□ -0.05
LMNA-224ENST00000515711 SUCLG2Q96I99 432 aa14.75□□□□□ -0.05
LMNA-224ENST00000515711 SGIP1Q9BQI5 828 aa14.75□□□□□ -0.05
LMNA-224ENST00000515711 OSBPL3Q9H4L5 887 aa14.75□□□□□ -0.05
LMNA-224ENST00000515711 CWC25Q9NXE8 425 aaPredicted RBP14.75□□□□□ -0.05
LMNA-224ENST00000515711 NOP58Q9Y2X3 529 aaKnown RBP14.75□□□□□ -0.05
LMNA-224ENST00000515711 MAP3K15Q6ZN16 1313 aa14.74□□□□□ -0.05
LMNA-224ENST00000515711 IL6STP40189 918 aaPredicted RBP14.74□□□□□ -0.05
LMNA-224ENST00000515711 TTC22Q5TAA0 569 aa14.74□□□□□ -0.05
LMNA-224ENST00000515711 TTLL7Q6ZT98 887 aa14.74□□□□□ -0.05
LMNA-224ENST00000515711 NPM2Q86SE8 214 aaKnown RBP14.74□□□□□ -0.05
LMNA-224ENST00000515711 LAMB2P55268 1798 aa14.73□□□□□ -0.05
LMNA-224ENST00000515711 SURF6O75683 361 aaKnown RBP14.73□□□□□ -0.05
LMNA-224ENST00000515711 ACSBG1Q96GR2 724 aa14.73□□□□□ -0.05
LMNA-224ENST00000515711 BICC1Q9H694 974 aaKnown RBP14.73□□□□□ -0.05
LMNA-224ENST00000515711 TAF1LQ8IZX4 1826 aa14.73□□□□□ -0.05
LMNA-224ENST00000515711 SALL3Q9BXA9 1300 aa14.72□□□□□ -0.05
LMNA-224ENST00000515711 SCN7AQ01118 1682 aa14.72□□□□□ -0.05
LMNA-224ENST00000515711 A0A087WZG4 1122 aa14.72□□□□□ -0.05
LMNA-224ENST00000515711 LOC102724428A0A0B4J2F2 783 aa14.72□□□□□ -0.05
LMNA-224ENST00000515711 APBB1O00213 710 aa14.72□□□□□ -0.05
LMNA-224ENST00000515711 PLSCR1O15162 318 aa14.72□□□□□ -0.05
LMNA-224ENST00000515711 HSPA6P17066 643 aa14.72□□□□□ -0.05
LMNA-224ENST00000515711 SIK1P57059 783 aa14.72□□□□□ -0.05
LMNA-224ENST00000515711 TRIM28Q13263 835 aaKnown RBP14.72□□□□□ -0.05
LMNA-224ENST00000515711 RABL6Q3YEC7 729 aaPredicted RBP14.72□□□□□ -0.05
LMNA-224ENST00000515711 PROM2Q8N271 834 aa14.72□□□□□ -0.05
LMNA-224ENST00000515711 SLC4A9Q96Q91 983 aa14.72□□□□□ -0.05
LMNA-224ENST00000515711 ARXQ96QS3 562 aa14.72□□□□□ -0.05
LMNA-224ENST00000515711 ISCA1Q9BUE6 129 aa14.72□□□□□ -0.05
LMNA-224ENST00000515711 ZBTB3Q9H5J0 574 aa14.72□□□□□ -0.05
LMNA-224ENST00000515711 MYH14Q7Z406 1995 aaKnown RBP14.72□□□□□ -0.05
LMNA-224ENST00000515711 ERVV-1B6SEH8 477 aa14.71□□□□□ -0.05
LMNA-224ENST00000515711 H7C1W4 665 aa14.71□□□□□ -0.05
LMNA-224ENST00000515711 SMARCA5O60264 1052 aaPredicted RBP14.71□□□□□ -0.05
LMNA-224ENST00000515711 CDC45O75419 566 aa14.71□□□□□ -0.05
LMNA-224ENST00000515711 MX1P20591 662 aa14.71□□□□□ -0.05
LMNA-224ENST00000515711 OS9Q13438 667 aaPredicted RBP14.71□□□□□ -0.05
LMNA-224ENST00000515711 TCIRG1Q13488 830 aa14.71□□□□□ -0.05
LMNA-224ENST00000515711 CASC1Q6TDU7 716 aa14.71□□□□□ -0.05
LMNA-224ENST00000515711 GIGYF2Q6Y7W6 1299 aaKnown RBP14.71□□□□□ -0.05
LMNA-224ENST00000515711 UBE3BQ7Z3V4 1068 aa14.71□□□□□ -0.05
LMNA-224ENST00000515711 RHPN1Q8TCX5 695 aa14.71□□□□□ -0.05
LMNA-224ENST00000515711 KAZALD1Q96I82 304 aa14.71□□□□□ -0.05
LMNA-224ENST00000515711 MTFR1LQ9H019 292 aa14.71□□□□□ -0.05
LMNA-224ENST00000515711 CCDC87Q9NVE4 849 aa14.71□□□□□ -0.05
LMNA-224ENST00000515711 RGPD3A6NKT7 1758 aaPredicted RBP14.7□□□□□ -0.06
LMNA-224ENST00000515711 RGPD4Q7Z3J3 1758 aa14.7□□□□□ -0.06
LMNA-224ENST00000515711 ATP5J2-PTCD1G3V325 749 aa14.7□□□□□ -0.06
LMNA-224ENST00000515711 ATP6V1AP38606 617 aa14.7□□□□□ -0.06
LMNA-224ENST00000515711 CASP7P55210 303 aa14.7□□□□□ -0.06
LMNA-224ENST00000515711 IPO9Q96P70 1041 aaKnown RBP14.7□□□□□ -0.06
LMNA-224ENST00000515711 STK32BQ9NY57 414 aa14.7□□□□□ -0.06
LMNA-224ENST00000515711 STAP2Q9UGK3 403 aa14.7□□□□□ -0.06
LMNA-224ENST00000515711 ZBTB1Q9Y2K1 713 aa14.7□□□□□ -0.06
LMNA-224ENST00000515711 ZNF330Q9Y3S2 320 aaPredicted RBP14.7□□□□□ -0.06
LMNA-224ENST00000515711 GSPT1P15170 499 aaKnown RBP14.69□□□□□ -0.06
LMNA-224ENST00000515711 PDE1AP54750 535 aa14.69□□□□□ -0.06
LMNA-224ENST00000515711 KLHL34Q8N239 644 aa14.69□□□□□ -0.06
LMNA-224ENST00000515711 USP42Q9H9J4 1324 aaKnown RBP14.68□□□□□ -0.06
LMNA-224ENST00000515711 GOLGB1Q14789 3259 aaKnown RBP14.68□□□□□ -0.06
LMNA-224ENST00000515711 RGL2O15211 777 aa14.68□□□□□ -0.06
LMNA-224ENST00000515711 CRKLP46109 303 aaKnown RBP14.68□□□□□ -0.06
LMNA-224ENST00000515711 G3BP1Q13283 466 aaKnown RBP eCLIP14.68□□□□□ -0.06
LMNA-224ENST00000515711 SLC15A2Q16348 729 aa14.68□□□□□ -0.06
LMNA-224ENST00000515711 C16orf71Q8IYS4 520 aaPredicted RBP14.68□□□□□ -0.06
LMNA-224ENST00000515711 CLASRPQ8N2M8 674 aaKnown RBP14.68□□□□□ -0.06
LMNA-224ENST00000515711 GPATCH3Q96I76 525 aa14.68□□□□□ -0.06
LMNA-224ENST00000515711 COPRSQ9NQ92 184 aa14.68□□□□□ -0.06
LMNA-224ENST00000515711 TTC41PQ6P2S7 1318 aa14.67□□□□□ -0.06
LMNA-224ENST00000515711 CDHR2Q9BYE9 1310 aa14.67□□□□□ -0.06
LMNA-224ENST00000515711 CNTNAP4Q9C0A0 1308 aa14.67□□□□□ -0.06
LMNA-224ENST00000515711 PCCAP05165 728 aaPredicted RBP14.67□□□□□ -0.06
LMNA-224ENST00000515711 EIF5P55010 431 aaKnown RBP14.67□□□□□ -0.06
LMNA-224ENST00000515711 DZIP3Q86Y13 1208 aaKnown RBP14.67□□□□□ -0.06
LMNA-224ENST00000515711 ZBTB38Q8NAP3 1195 aaPredicted RBP14.66□□□□□ -0.06
LMNA-224ENST00000515711 OTUD7AQ8TE49 926 aaPredicted RBP14.66□□□□□ -0.06
LMNA-224ENST00000515711 TBC1D32Q96NH3 1257 aa14.66□□□□□ -0.06
LMNA-224ENST00000515711 PLA2G12BQ9BX93 195 aa14.66□□□□□ -0.06
LMNA-224ENST00000515711 ERC2O15083 957 aa14.65□□□□□ -0.06
LMNA-224ENST00000515711 ITPK1Q13572 414 aa14.65□□□□□ -0.06
LMNA-224ENST00000515711 INTS5Q6P9B9 1019 aaKnown RBP14.65□□□□□ -0.06
LMNA-224ENST00000515711 TBC1D9Q6ZT07 1266 aa14.65□□□□□ -0.06
LMNA-224ENST00000515711 C4BP0C0L5 1744 aa14.64□□□□□ -0.07
LMNA-224ENST00000515711 SEC24BO95487 1268 aa14.64□□□□□ -0.07
LMNA-224ENST00000515711 RFX5P48382 616 aaPredicted RBP14.64□□□□□ -0.07
LMNA-224ENST00000515711 MFAP1P55081 439 aaKnown RBP14.64□□□□□ -0.07
LMNA-224ENST00000515711 FOXO4P98177 505 aa14.64□□□□□ -0.07
LMNA-224ENST00000515711 TXNRD1Q16881 649 aa14.64□□□□□ -0.07
LMNA-224ENST00000515711 EPHA10Q5JZY3 1008 aa14.64□□□□□ -0.07
LMNA-224ENST00000515711 IL1RAPL2Q9NP60 686 aa14.64□□□□□ -0.07
LMNA-224ENST00000515711 ZNF652Q9Y2D9 606 aa14.64□□□□□ -0.07
LMNA-224ENST00000515711 COL24A1Q17RW2 1714 aa14.63□□□□□ -0.07
LMNA-224ENST00000515711 DDX60Q8IY21 1712 aaKnown RBP14.63□□□□□ -0.07
LMNA-224ENST00000515711 IFIT2P09913 472 aaKnown RBP14.63□□□□□ -0.07
LMNA-224ENST00000515711 SDSP20132 328 aa14.63□□□□□ -0.07
LMNA-224ENST00000515711 HMGB2P26583 209 aaKnown RBP14.63□□□□□ -0.07
LMNA-224ENST00000515711 PARP10Q53GL7 1025 aa14.63□□□□□ -0.07
LMNA-224ENST00000515711 LMBR1LQ6UX01 489 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms