RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 PTCD1O75127 700 aaKnown RBP6.69□□□□□ -1.34
CAST-242ENST00000515063 GDF11O95390 407 aa6.69□□□□□ -1.34
CAST-242ENST00000515063 PCBP4P57723 403 aaKnown RBP6.69□□□□□ -1.34
CAST-242ENST00000515063 FKBP5Q13451 457 aaPredicted RBP6.69□□□□□ -1.34
CAST-242ENST00000515063 DGKZQ13574 1117 aa6.69□□□□□ -1.34
CAST-242ENST00000515063 C11orf91Q3C1V1 193 aa6.69□□□□□ -1.34
CAST-242ENST00000515063 ELOA3BQ3SY89 546 aa6.69□□□□□ -1.34
CAST-242ENST00000515063 ALYREFQ86V81 257 aaKnown RBP6.69□□□□□ -1.34
CAST-242ENST00000515063 ELOA3Q8NG57 546 aa6.69□□□□□ -1.34
CAST-242ENST00000515063 CLP1Q92989 425 aaKnown RBP6.69□□□□□ -1.34
CAST-242ENST00000515063 PRIMPOLQ96LW4 560 aa6.69□□□□□ -1.34
CAST-242ENST00000515063 QTRT2Q9H974 415 aaKnown RBP6.69□□□□□ -1.34
CAST-242ENST00000515063 ARSDP51689 593 aa6.68□□□□□ -1.34
CAST-242ENST00000515063 FAM69CQ0P6D2 419 aa6.68□□□□□ -1.34
CAST-242ENST00000515063 OCLNQ16625 522 aa6.68□□□□□ -1.34
CAST-242ENST00000515063 C1orf229Q6ZS94 237 aaPredicted RBP6.68□□□□□ -1.34
CAST-242ENST00000515063 FCHSD1Q86WN1 690 aa6.68□□□□□ -1.34
CAST-242ENST00000515063 BTBD6Q96KE9 485 aa6.68□□□□□ -1.34
CAST-242ENST00000515063 PNMA5Q96PV4 448 aa6.68□□□□□ -1.34
CAST-242ENST00000515063 C11orf16Q9NQ32 467 aa6.68□□□□□ -1.34
CAST-242ENST00000515063 CXXC1Q9P0U4 656 aaPredicted RBP6.68□□□□□ -1.34
CAST-242ENST00000515063 HCN2Q9UL51 889 aa6.68□□□□□ -1.34
CAST-242ENST00000515063 ADARB2-AS1A8MUL3 147 aa6.67□□□□□ -1.34
CAST-242ENST00000515063 CHSY3Q70JA7 882 aa6.67□□□□□ -1.34
CAST-242ENST00000515063 TNFRSF25Q93038 417 aa6.67□□□□□ -1.34
CAST-242ENST00000515063 NOP53Q9NZM5 478 aaKnown RBP6.67□□□□□ -1.34
CAST-242ENST00000515063 KLK14Q9P0G3 267 aa6.67□□□□□ -1.34
CAST-242ENST00000515063 CNTNAP5Q8WYK1 1306 aa6.67□□□□□ -1.34
CAST-242ENST00000515063 GNB5O14775 395 aa6.66□□□□□ -1.34
CAST-242ENST00000515063 IDH3AP50213 366 aa6.66□□□□□ -1.34
CAST-242ENST00000515063 CCINQ13939 588 aa6.66□□□□□ -1.34
CAST-242ENST00000515063 C16orf46Q6P387 395 aa6.66□□□□□ -1.34
CAST-242ENST00000515063 IFT43Q96FT9 208 aa6.66□□□□□ -1.34
CAST-242ENST00000515063 SLC30A3Q99726 388 aa6.66□□□□□ -1.34
CAST-242ENST00000515063 KLF15Q9UIH9 416 aa6.66□□□□□ -1.34
CAST-242ENST00000515063 MICAL2O94851 1124 aa6.65□□□□□ -1.34
CAST-242ENST00000515063 ARID4AP29374 1257 aaPredicted RBP6.65□□□□□ -1.34
CAST-242ENST00000515063 INPP5BP32019 993 aa6.65□□□□□ -1.34
CAST-242ENST00000515063 DGKGP49619 791 aa6.65□□□□□ -1.34
CAST-242ENST00000515063 PCSK7Q16549 785 aa6.65□□□□□ -1.34
CAST-242ENST00000515063 BHMTQ93088 406 aa6.65□□□□□ -1.34
CAST-242ENST00000515063 FAM13BQ9NYF5 915 aa6.65□□□□□ -1.34
CAST-242ENST00000515063 DMGDHQ9UI17 866 aaKnown RBP6.65□□□□□ -1.34
CAST-242ENST00000515063 BCS1LQ9Y276 419 aa6.65□□□□□ -1.34
CAST-242ENST00000515063 SPDYE3A6NKU9 549 aa6.64□□□□□ -1.35
CAST-242ENST00000515063 ATP2B4P23634 1241 aa6.64□□□□□ -1.35
CAST-242ENST00000515063 BRD2P25440 801 aaKnown RBP6.64□□□□□ -1.35
CAST-242ENST00000515063 ADH7P40394 386 aa6.64□□□□□ -1.35
CAST-242ENST00000515063 GSK3AP49840 483 aa6.64□□□□□ -1.35
CAST-242ENST00000515063 SNRPNP63162 240 aaKnown RBP6.64□□□□□ -1.35
CAST-242ENST00000515063 COX20Q5RI15 118 aa6.63□□□□□ -1.35
CAST-242ENST00000515063 RAB44Q7Z6P3 723 aaPredicted RBP6.63□□□□□ -1.35
CAST-242ENST00000515063 MKNK1Q9BUB5 465 aa6.63□□□□□ -1.35
CAST-242ENST00000515063 UBE2OQ9C0C9 1292 aaKnown RBP6.63□□□□□ -1.35
CAST-242ENST00000515063 C1orf115Q9H7X2 142 aa6.63□□□□□ -1.35
CAST-242ENST00000515063 CCDC180Q9P1Z9 1646 aa6.63□□□□□ -1.35
CAST-242ENST00000515063 LRFN2Q9ULH4 789 aa6.63□□□□□ -1.35
CAST-242ENST00000515063 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.63□□□□□ -1.35
CAST-242ENST00000515063 IGHA1P01876 353 aa6.62□□□□□ -1.35
CAST-242ENST00000515063 GRIN2CQ14957 1233 aa6.62□□□□□ -1.35
CAST-242ENST00000515063 TREML1Q86YW5 311 aa6.62□□□□□ -1.35
CAST-242ENST00000515063 MDFIQ99750 246 aa6.62□□□□□ -1.35
CAST-242ENST00000515063 GSX2Q9BZM3 304 aa6.62□□□□□ -1.35
CAST-242ENST00000515063 NFKB1P19838 968 aa6.61□□□□□ -1.35
CAST-242ENST00000515063 TBC1D8BQ0IIM8 1120 aa6.61□□□□□ -1.35
CAST-242ENST00000515063 LINC00114Q6XXX2 140 aa6.61□□□□□ -1.35
CAST-242ENST00000515063 ABTB2Q8N961 1025 aa6.61□□□□□ -1.35
CAST-242ENST00000515063 DCAF5Q96JK2 942 aa6.61□□□□□ -1.35
CAST-242ENST00000515063 MTMR7Q9Y216 660 aa6.61□□□□□ -1.35
CAST-242ENST00000515063 MAP3K6O95382 1288 aa6.6□□□□□ -1.35
CAST-242ENST00000515063 HOXB4P17483 251 aaPredicted RBP6.6□□□□□ -1.35
CAST-242ENST00000515063 B4GALNT3Q6L9W6 998 aa6.6□□□□□ -1.35
CAST-242ENST00000515063 KCTD17Q8N5Z5 321 aa6.6□□□□□ -1.35
CAST-242ENST00000515063 IGFLR1Q9H665 355 aa6.6□□□□□ -1.35
CAST-242ENST00000515063 PRDM6Q9NQX0 595 aa6.6□□□□□ -1.35
CAST-242ENST00000515063 RTCBQ9Y3I0 505 aaKnown RBP6.6□□□□□ -1.35
CAST-242ENST00000515063 M0R082 166 aa6.59□□□□□ -1.35
CAST-242ENST00000515063 EGFRP00533 1210 aa6.59□□□□□ -1.35
CAST-242ENST00000515063 RARAP10276 462 aa6.59□□□□□ -1.35
CAST-242ENST00000515063 NAA30Q147X3 362 aaPredicted RBP6.59□□□□□ -1.35
CAST-242ENST00000515063 RGL4Q8IZJ4 473 aa6.59□□□□□ -1.35
CAST-242ENST00000515063 ZNF417Q8TAU3 575 aa6.59□□□□□ -1.35
CAST-242ENST00000515063 PIK3R5Q8WYR1 880 aa6.59□□□□□ -1.35
CAST-242ENST00000515063 ZNF587Q96SQ5 575 aaPredicted RBP6.59□□□□□ -1.35
CAST-242ENST00000515063 SAP130Q9H0E3 1048 aa6.59□□□□□ -1.35
CAST-242ENST00000515063 DNAJB12Q9NXW2 375 aaKnown RBP6.59□□□□□ -1.35
CAST-242ENST00000515063 STIM2Q9P246 746 aa6.59□□□□□ -1.35
CAST-242ENST00000515063 SLC6A14Q9UN76 642 aa6.59□□□□□ -1.35
CAST-242ENST00000515063 USTQ9Y2C2 406 aa6.59□□□□□ -1.35
CAST-242ENST00000515063 LILRB5O75023 590 aa6.58□□□□□ -1.36
CAST-242ENST00000515063 XYLBO75191 536 aa6.58□□□□□ -1.36
CAST-242ENST00000515063 PDE4CQ08493 712 aa6.58□□□□□ -1.36
CAST-242ENST00000515063 PRRT3Q5FWE3 981 aa6.58□□□□□ -1.36
CAST-242ENST00000515063 ETFBKMTQ8IXQ9 262 aa6.58□□□□□ -1.36
CAST-242ENST00000515063 CMTR1Q8N1G2 835 aaKnown RBP6.58□□□□□ -1.36
CAST-242ENST00000515063 FNDC3AQ9Y2H6 1198 aaKnown RBP6.58□□□□□ -1.36
CAST-242ENST00000515063 TMEM88BA6NKF7 163 aa6.57□□□□□ -1.36
CAST-242ENST00000515063 OPLAHO14841 1288 aa6.57□□□□□ -1.36
CAST-242ENST00000515063 DHX32Q7L7V1 743 aaKnown RBP6.57□□□□□ -1.36
CAST-242ENST00000515063 KRT25Q7Z3Z0 450 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms