RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 MAP3K15Q6ZN16 1313 aa18.27■□□□□ 0.52
VCAN-211ENST00000513984 IFIT2P09913 472 aaKnown RBP18.27■□□□□ 0.52
VCAN-211ENST00000513984 HSCBQ8IWL3 235 aa18.27■□□□□ 0.52
VCAN-211ENST00000513984 KLHDC4Q8TBB5 520 aa18.27■□□□□ 0.52
VCAN-211ENST00000513984 SIL1Q9H173 461 aa18.27■□□□□ 0.52
VCAN-211ENST00000513984 ECHDC1Q9NTX5 307 aa18.27■□□□□ 0.52
VCAN-211ENST00000513984 AACSQ86V21 672 aa18.26■□□□□ 0.51
VCAN-211ENST00000513984 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.26■□□□□ 0.51
VCAN-211ENST00000513984 MYH14Q7Z406 1995 aaKnown RBP18.26■□□□□ 0.51
VCAN-211ENST00000513984 SPATA31A6Q5VVP1 1343 aa18.26■□□□□ 0.51
VCAN-211ENST00000513984 THSD7AQ9UPZ6 1657 aa18.26■□□□□ 0.51
VCAN-211ENST00000513984 LMBR1LQ6UX01 489 aa18.26■□□□□ 0.51
VCAN-211ENST00000513984 CNTROBQ8N137 903 aa18.26■□□□□ 0.51
VCAN-211ENST00000513984 EAF2Q96CJ1 260 aaPredicted RBP18.26■□□□□ 0.51
VCAN-211ENST00000513984 C8orf37Q96NL8 207 aa18.26■□□□□ 0.51
VCAN-211ENST00000513984 ZBTB1Q9Y2K1 713 aa18.26■□□□□ 0.51
VCAN-211ENST00000513984 ZNF330Q9Y3S2 320 aaPredicted RBP18.26■□□□□ 0.51
VCAN-211ENST00000513984 GIGYF2Q6Y7W6 1299 aaKnown RBP18.25■□□□□ 0.51
VCAN-211ENST00000513984 FNBP4Q8N3X1 1017 aaPredicted RBP18.25■□□□□ 0.51
VCAN-211ENST00000513984 NGLY1Q96IV0 654 aa18.25■□□□□ 0.51
VCAN-211ENST00000513984 ANTXR1Q9H6X2 564 aa18.24■□□□□ 0.51
VCAN-211ENST00000513984 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
VCAN-211ENST00000513984 NBR1Q14596 966 aa18.23■□□□□ 0.51
VCAN-211ENST00000513984 RABEP1Q15276 862 aa18.23■□□□□ 0.51
VCAN-211ENST00000513984 ACSBG1Q96GR2 724 aa18.23■□□□□ 0.51
VCAN-211ENST00000513984 EPB41L2O43491 1005 aaKnown RBP18.23■□□□□ 0.51
VCAN-211ENST00000513984 HSP90AB3PQ58FF7 597 aa18.23■□□□□ 0.51
VCAN-211ENST00000513984 PCCAP05165 728 aaPredicted RBP18.22■□□□□ 0.51
VCAN-211ENST00000513984 FAM98CQ17RN3 349 aaKnown RBP18.22■□□□□ 0.51
VCAN-211ENST00000513984 MAP4K4O95819 1239 aaPredicted RBP18.21■□□□□ 0.51
VCAN-211ENST00000513984 PLA2G12BQ9BX93 195 aa18.21■□□□□ 0.51
VCAN-211ENST00000513984 ERVV-1B6SEH8 477 aa18.21■□□□□ 0.51
VCAN-211ENST00000513984 RTL5Q5HYW3 569 aaPredicted RBP18.21■□□□□ 0.51
VCAN-211ENST00000513984 CCDC8Q9H0W5 538 aaPredicted RBP18.21■□□□□ 0.51
VCAN-211ENST00000513984 SLKQ9H2G2 1235 aaPredicted RBP18.21■□□□□ 0.51
VCAN-211ENST00000513984 PALLDQ8WX93 1383 aa18.2■□□□□ 0.5
VCAN-211ENST00000513984 BCORQ6W2J9 1755 aa18.2■□□□□ 0.5
VCAN-211ENST00000513984 LOC102724428A0A0B4J2F2 783 aa18.2■□□□□ 0.5
VCAN-211ENST00000513984 SIK1P57059 783 aa18.2■□□□□ 0.5
VCAN-211ENST00000513984 HLFQ16534 295 aa18.2■□□□□ 0.5
VCAN-211ENST00000513984 TNNI3KQ59H18 835 aa18.2■□□□□ 0.5
VCAN-211ENST00000513984 ZBTB38Q8NAP3 1195 aaPredicted RBP18.2■□□□□ 0.5
VCAN-211ENST00000513984 CERKQ8TCT0 537 aa18.2■□□□□ 0.5
VCAN-211ENST00000513984 TLR7Q9NYK1 1049 aaKnown RBP18.2■□□□□ 0.5
VCAN-211ENST00000513984 FPGT-TNNI3KV9GXZ4 949 aa18.2■□□□□ 0.5
VCAN-211ENST00000513984 CDHR2Q9BYE9 1310 aa18.2■□□□□ 0.5
VCAN-211ENST00000513984 NHSQ6T4R5 1651 aa18.19■□□□□ 0.5
VCAN-211ENST00000513984 TFCP2Q12800 502 aa18.19■□□□□ 0.5
VCAN-211ENST00000513984 SMARCC1Q92922 1105 aaPredicted RBP18.19■□□□□ 0.5
VCAN-211ENST00000513984 EVI5LQ96CN4 794 aa18.19■□□□□ 0.5
VCAN-211ENST00000513984 CHMP3Q9Y3E7 222 aa18.19■□□□□ 0.5
VCAN-211ENST00000513984 BTAF1O14981 1849 aa18.19■□□□□ 0.5
VCAN-211ENST00000513984 CD2BP2O95400 341 aaKnown RBP18.19■□□□□ 0.5
VCAN-211ENST00000513984 ATP6V1AP38606 617 aa18.19■□□□□ 0.5
VCAN-211ENST00000513984 EIF5P55010 431 aaKnown RBP18.19■□□□□ 0.5
VCAN-211ENST00000513984 INTS5Q6P9B9 1019 aaKnown RBP18.19■□□□□ 0.5
VCAN-211ENST00000513984 NLRP10Q86W26 655 aa18.19■□□□□ 0.5
VCAN-211ENST00000513984 CCDC87Q9NVE4 849 aa18.19■□□□□ 0.5
VCAN-211ENST00000513984 A0A0G2JS52 829 aa18.18■□□□□ 0.5
VCAN-211ENST00000513984 SGSM2O43147 1006 aa18.18■□□□□ 0.5
VCAN-211ENST00000513984 ATG9AQ7Z3C6 839 aa18.18■□□□□ 0.5
VCAN-211ENST00000513984 DZIP3Q86Y13 1208 aaKnown RBP18.18■□□□□ 0.5
VCAN-211ENST00000513984 IL17RAQ96F46 866 aa18.18■□□□□ 0.5
VCAN-211ENST00000513984 IL25Q9H293 177 aa18.18■□□□□ 0.5
VCAN-211ENST00000513984 ANO2Q9NQ90 1003 aa18.18■□□□□ 0.5
VCAN-211ENST00000513984 K7ELQ4 463 aaPredicted RBP18.17■□□□□ 0.5
VCAN-211ENST00000513984 CRKLP46109 303 aaKnown RBP18.17■□□□□ 0.5
VCAN-211ENST00000513984 ARXQ96QS3 562 aa18.17■□□□□ 0.5
VCAN-211ENST00000513984 GPR108Q9NPR9 543 aa18.17■□□□□ 0.5
VCAN-211ENST00000513984 DBNLQ9UJU6 430 aaKnown RBP18.17■□□□□ 0.5
VCAN-211ENST00000513984 SBF2Q86WG5 1849 aa18.17■□□□□ 0.5
VCAN-211ENST00000513984 LAMB2P55268 1798 aa18.17■□□□□ 0.5
VCAN-211ENST00000513984 CIAO1O76071 339 aa18.16■□□□□ 0.5
VCAN-211ENST00000513984 MCCP23508 829 aa18.16■□□□□ 0.5
VCAN-211ENST00000513984 IL15P40933 162 aaPredicted RBP18.16■□□□□ 0.5
VCAN-211ENST00000513984 ANAPC15P60006 121 aa18.16■□□□□ 0.5
VCAN-211ENST00000513984 ITPK1Q13572 414 aa18.16■□□□□ 0.5
VCAN-211ENST00000513984 NFKBIBQ15653 356 aa18.16■□□□□ 0.5
VCAN-211ENST00000513984 USP21Q9UK80 565 aa18.16■□□□□ 0.5
VCAN-211ENST00000513984 EYA2O00167 538 aa18.16■□□□□ 0.5
VCAN-211ENST00000513984 KCNQ2O43526 872 aa18.16■□□□□ 0.5
VCAN-211ENST00000513984 CSF1RP07333 972 aa18.16■□□□□ 0.5
VCAN-211ENST00000513984 FAM89AQ96GI7 184 aa18.16■□□□□ 0.5
VCAN-211ENST00000513984 FBXO3Q9UK99 471 aa18.16■□□□□ 0.5
VCAN-211ENST00000513984 ZNF609O15014 1411 aa18.15■□□□□ 0.5
VCAN-211ENST00000513984 ATP5JP18859 108 aa18.15■□□□□ 0.5
VCAN-211ENST00000513984 GPTP24298 496 aa18.15■□□□□ 0.5
VCAN-211ENST00000513984 RAD50Q92878 1312 aa18.14■□□□□ 0.5
VCAN-211ENST00000513984 DDIT3P35638 169 aa18.14■□□□□ 0.5
VCAN-211ENST00000513984 ZNF34Q8IZ26 560 aa18.14■□□□□ 0.5
VCAN-211ENST00000513984 RUFY2Q8WXA3 655 aa18.14■□□□□ 0.5
VCAN-211ENST00000513984 DIAPH3Q9NSV4 1193 aa18.14■□□□□ 0.5
VCAN-211ENST00000513984 TBC1D2BQ9UPU7 963 aa18.14■□□□□ 0.5
VCAN-211ENST00000513984 SPEF2Q9C093 1822 aa18.14■□□□□ 0.49
VCAN-211ENST00000513984 HIP1O00291 1037 aa18.14■□□□□ 0.49
VCAN-211ENST00000513984 SPRYD3Q8NCJ5 442 aa18.14■□□□□ 0.49
VCAN-211ENST00000513984 DDX60Q8IY21 1712 aaKnown RBP18.14■□□□□ 0.49
VCAN-211ENST00000513984 CCDC57Q2TAC2 916 aa18.13■□□□□ 0.49
VCAN-211ENST00000513984 CWC27Q6UX04 472 aaKnown RBP18.13■□□□□ 0.49
VCAN-211ENST00000513984 LSG1Q9H089 658 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms