RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 HEG1Q9ULI3 1381 aa7.77□□□□□ -1.17
GYPB-208ENST00000507009 GRM1Q13255 1194 aa7.77□□□□□ -1.17
GYPB-208ENST00000507009 DZIP3Q86Y13 1208 aaKnown RBP7.77□□□□□ -1.17
GYPB-208ENST00000507009 CNKSR1Q969H4 720 aa7.77□□□□□ -1.17
GYPB-208ENST00000507009 ZNF277Q9NRM2 450 aaPredicted RBP7.77□□□□□ -1.17
GYPB-208ENST00000507009 PCDH10Q9P2E7 1040 aa7.77□□□□□ -1.17
GYPB-208ENST00000507009 CNTNAP1P78357 1384 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 IQCA1LA6NCM1 817 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 TMEM88BA6NKF7 163 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 SRGNP10124 158 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 VEGFBP49765 207 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 LBX1P52954 281 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 PDAP1Q13442 181 aaKnown RBP7.76□□□□□ -1.17
GYPB-208ENST00000507009 STYK1Q6J9G0 422 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 ZNF790Q6PG37 636 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 OLFM4Q6UX06 510 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 PAXIP1Q6ZW49 1069 aaPredicted RBP7.76□□□□□ -1.17
GYPB-208ENST00000507009 LDHDQ86WU2 507 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 NBPF5PQ86XG9 351 aaPredicted RBP7.76□□□□□ -1.17
GYPB-208ENST00000507009 PDCD7Q8N8D1 485 aaKnown RBP7.76□□□□□ -1.17
GYPB-208ENST00000507009 IL17REQ8NFR9 667 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 MASTLQ96GX5 879 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 FMNL2Q96PY5 1086 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 TAF1DQ9H5J8 278 aaPredicted RBP7.76□□□□□ -1.17
GYPB-208ENST00000507009 TIMELESSQ9UNS1 1208 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 PDZRN3Q9UPQ7 1066 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 ZNF541Q9H0D2 1346 aa7.76□□□□□ -1.17
GYPB-208ENST00000507009 BCORQ6W2J9 1755 aa7.75□□□□□ -1.17
GYPB-208ENST00000507009 ARFGEF2Q9Y6D5 1785 aa7.75□□□□□ -1.17
GYPB-208ENST00000507009 BTBD11A6QL63 1104 aa7.75□□□□□ -1.17
GYPB-208ENST00000507009 GNAT3A8MTJ3 354 aa7.75□□□□□ -1.17
GYPB-208ENST00000507009 KCNQ3O43525 872 aa7.75□□□□□ -1.17
GYPB-208ENST00000507009 CAMTA2O94983 1202 aa7.75□□□□□ -1.17
GYPB-208ENST00000507009 IL6STP40189 918 aaPredicted RBP7.75□□□□□ -1.17
GYPB-208ENST00000507009 CTCFP49711 727 aaPredicted RBP7.75□□□□□ -1.17
GYPB-208ENST00000507009 CCDC93Q567U6 631 aa7.75□□□□□ -1.17
GYPB-208ENST00000507009 AMER1Q5JTC6 1135 aaPredicted RBP7.75□□□□□ -1.17
GYPB-208ENST00000507009 SOGA3Q5TF21 947 aa7.75□□□□□ -1.17
GYPB-208ENST00000507009 MAP1SQ66K74 1059 aaPredicted RBP7.75□□□□□ -1.17
GYPB-208ENST00000507009 TEX13AQ9BXU3 409 aaPredicted RBP7.75□□□□□ -1.17
GYPB-208ENST00000507009 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.75□□□□□ -1.17
GYPB-208ENST00000507009 ABT1Q9ULW3 272 aaKnown RBP7.75□□□□□ -1.17
GYPB-208ENST00000507009 RNF123Q5XPI4 1314 aa7.75□□□□□ -1.17
GYPB-208ENST00000507009 LTBP3Q9NS15 1303 aa7.75□□□□□ -1.17
GYPB-208ENST00000507009 SIPA1L3O60292 1781 aaPredicted RBP7.74□□□□□ -1.17
GYPB-208ENST00000507009 SCN4AP35499 1836 aa7.74□□□□□ -1.17
GYPB-208ENST00000507009 PRAMEF22A3QJZ6 481 aa7.74□□□□□ -1.17
GYPB-208ENST00000507009 GTF2E1P29083 439 aaPredicted RBP7.74□□□□□ -1.17
GYPB-208ENST00000507009 EPHX2P34913 555 aa7.74□□□□□ -1.17
GYPB-208ENST00000507009 FKBP4Q02790 459 aaKnown RBP eCLIP7.74□□□□□ -1.17
GYPB-208ENST00000507009 NGEFQ8N5V2 710 aa7.74□□□□□ -1.17
GYPB-208ENST00000507009 GAS2L2Q8NHY3 880 aa7.74□□□□□ -1.17
GYPB-208ENST00000507009 HACL1Q9UJ83 578 aa7.74□□□□□ -1.17
GYPB-208ENST00000507009 USP16Q9Y5T5 823 aa7.74□□□□□ -1.17
GYPB-208ENST00000507009 GJA3Q9Y6H8 435 aa7.74□□□□□ -1.17
GYPB-208ENST00000507009 TCERG1O14776 1098 aaKnown RBP7.73□□□□□ -1.17
GYPB-208ENST00000507009 ST18O60284 1047 aa7.73□□□□□ -1.17
GYPB-208ENST00000507009 NPR1P16066 1061 aa7.73□□□□□ -1.17
GYPB-208ENST00000507009 DEFB115Q30KQ5 88 aa7.73□□□□□ -1.17
GYPB-208ENST00000507009 CCER1Q8TC90 406 aaPredicted RBP7.73□□□□□ -1.17
GYPB-208ENST00000507009 CFAP44Q96MT7 982 aa7.73□□□□□ -1.17
GYPB-208ENST00000507009 PRDM10Q9NQV6 1147 aa7.73□□□□□ -1.17
GYPB-208ENST00000507009 NIP7Q9Y221 180 aaKnown RBP eCLIP7.73□□□□□ -1.17
GYPB-208ENST00000507009 ZNF652Q9Y2D9 606 aa7.73□□□□□ -1.17
GYPB-208ENST00000507009 KIF7Q2M1P5 1343 aa7.73□□□□□ -1.17
GYPB-208ENST00000507009 PASKQ96RG2 1323 aa7.73□□□□□ -1.17
GYPB-208ENST00000507009 CCDC85CA6NKD9 419 aa7.72□□□□□ -1.17
GYPB-208ENST00000507009 ITGBL1O95965 494 aaPredicted RBP7.72□□□□□ -1.17
GYPB-208ENST00000507009 PRKAR2BP31323 418 aa7.72□□□□□ -1.17
GYPB-208ENST00000507009 IARSP41252 1262 aaKnown RBP7.72□□□□□ -1.17
GYPB-208ENST00000507009 FMR1Q06787 632 aaKnown RBP eCLIP7.72□□□□□ -1.17
GYPB-208ENST00000507009 FAM161AQ3B820 660 aa7.72□□□□□ -1.17
GYPB-208ENST00000507009 MCM10Q7L590 875 aa7.72□□□□□ -1.17
GYPB-208ENST00000507009 CNTROBQ8N137 903 aa7.72□□□□□ -1.17
GYPB-208ENST00000507009 SYNE4Q8N205 404 aa7.72□□□□□ -1.17
GYPB-208ENST00000507009 HSPA8P11142 646 aaKnown RBP7.71□□□□□ -1.18
GYPB-208ENST00000507009 LMOD1P29536 600 aaPredicted RBP7.71□□□□□ -1.18
GYPB-208ENST00000507009 DCTN1Q14203 1278 aa7.71□□□□□ -1.18
GYPB-208ENST00000507009 TPTE2Q6XPS3 522 aa7.71□□□□□ -1.18
GYPB-208ENST00000507009 RTKN2Q8IZC4 609 aa7.71□□□□□ -1.18
GYPB-208ENST00000507009 C7orf43Q8WVR3 580 aa7.71□□□□□ -1.18
GYPB-208ENST00000507009 JDP2Q8WYK2 163 aa7.71□□□□□ -1.18
GYPB-208ENST00000507009 RTF1Q92541 710 aaKnown RBP7.71□□□□□ -1.18
GYPB-208ENST00000507009 ABHD8Q96I13 439 aa7.71□□□□□ -1.18
GYPB-208ENST00000507009 L3MBTL3Q96JM7 780 aaPredicted RBP7.71□□□□□ -1.18
GYPB-208ENST00000507009 PHACTR3Q96KR7 559 aa7.71□□□□□ -1.18
GYPB-208ENST00000507009 WBP1LQ9NX94 342 aa7.71□□□□□ -1.18
GYPB-208ENST00000507009 TSKSQ9UJT2 592 aa7.71□□□□□ -1.18
GYPB-208ENST00000507009 WDR33Q9C0J8 1336 aaKnown RBP7.71□□□□□ -1.18
GYPB-208ENST00000507009 COL3A1P02461 1466 aaPredicted RBP7.7□□□□□ -1.18
GYPB-208ENST00000507009 TRAF5O00463 557 aa7.7□□□□□ -1.18
GYPB-208ENST00000507009 SNRPA1P09661 255 aaKnown RBP7.7□□□□□ -1.18
GYPB-208ENST00000507009 EIF6P56537 245 aaKnown RBP7.7□□□□□ -1.18
GYPB-208ENST00000507009 HLFQ16534 295 aa7.7□□□□□ -1.18
GYPB-208ENST00000507009 CYP4F22Q6NT55 531 aa7.7□□□□□ -1.18
GYPB-208ENST00000507009 C3orf67Q6ZVT6 689 aa7.7□□□□□ -1.18
GYPB-208ENST00000507009 SLC51AQ86UW1 340 aa7.7□□□□□ -1.18
GYPB-208ENST00000507009 PNMA8AQ86V59 439 aaPredicted RBP7.7□□□□□ -1.18
GYPB-208ENST00000507009 NUTM1Q86Y26 1132 aa7.7□□□□□ -1.18
GYPB-208ENST00000507009 BEGAINQ9BUH8 593 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms