RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 ANKRD36CQ5JPF3 1778 aa13.71□□□□□ -0.21
NFKB1-205ENST00000505458 CIAO1O76071 339 aa13.71□□□□□ -0.21
NFKB1-205ENST00000505458 SASH1O94885 1247 aa13.71□□□□□ -0.21
NFKB1-205ENST00000505458 SNRKQ9NRH2 765 aa13.71□□□□□ -0.21
NFKB1-205ENST00000505458 RFX5P48382 616 aaPredicted RBP13.71□□□□□ -0.21
NFKB1-205ENST00000505458 TSHZ3Q63HK5 1081 aa13.71□□□□□ -0.21
NFKB1-205ENST00000505458 INTS4Q96HW7 963 aaKnown RBP13.71□□□□□ -0.21
NFKB1-205ENST00000505458 ISCA1Q9BUE6 129 aa13.71□□□□□ -0.21
NFKB1-205ENST00000505458 PA2G4Q9UQ80 394 aaKnown RBP13.71□□□□□ -0.22
NFKB1-205ENST00000505458 IL15P40933 162 aaPredicted RBP13.7□□□□□ -0.22
NFKB1-205ENST00000505458 PLA2G12BQ9BX93 195 aa13.7□□□□□ -0.22
NFKB1-205ENST00000505458 ATP5JP18859 108 aa13.7□□□□□ -0.22
NFKB1-205ENST00000505458 TCIRG1Q13488 830 aa13.7□□□□□ -0.22
NFKB1-205ENST00000505458 TOM1O60784 492 aa13.69□□□□□ -0.22
NFKB1-205ENST00000505458 PTPN12Q05209 780 aaKnown RBP13.69□□□□□ -0.22
NFKB1-205ENST00000505458 ISY1Q9ULR0 285 aaKnown RBP13.69□□□□□ -0.22
NFKB1-205ENST00000505458 PTCD1O75127 700 aaKnown RBP13.69□□□□□ -0.22
NFKB1-205ENST00000505458 CDHR2Q9BYE9 1310 aa13.69□□□□□ -0.22
NFKB1-205ENST00000505458 UNC5CLQ8IV45 518 aa13.69□□□□□ -0.22
NFKB1-205ENST00000505458 PIGBQ92521 554 aa13.69□□□□□ -0.22
NFKB1-205ENST00000505458 DOT1LQ8TEK3 1739 aa13.69□□□□□ -0.22
NFKB1-205ENST00000505458 TNNI3KQ59H18 835 aa13.68□□□□□ -0.22
NFKB1-205ENST00000505458 EAF2Q96CJ1 260 aaPredicted RBP13.68□□□□□ -0.22
NFKB1-205ENST00000505458 TM6SF1Q9BZW5 370 aa13.68□□□□□ -0.22
NFKB1-205ENST00000505458 FPGT-TNNI3KV9GXZ4 949 aa13.68□□□□□ -0.22
NFKB1-205ENST00000505458 ZNF831Q5JPB2 1677 aa13.68□□□□□ -0.22
NFKB1-205ENST00000505458 PCCAP05165 728 aaPredicted RBP13.68□□□□□ -0.22
NFKB1-205ENST00000505458 NEK4P51957 841 aa13.68□□□□□ -0.22
NFKB1-205ENST00000505458 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
NFKB1-205ENST00000505458 MAP3K15Q6ZN16 1313 aa13.68□□□□□ -0.22
NFKB1-205ENST00000505458 A1BGP04217 495 aa13.68□□□□□ -0.22
NFKB1-205ENST00000505458 LRRFIP1Q32MZ4 808 aaKnown RBP13.68□□□□□ -0.22
NFKB1-205ENST00000505458 LSG1Q9H089 658 aaKnown RBP13.68□□□□□ -0.22
NFKB1-205ENST00000505458 SPATA31A1Q5TZJ5 1347 aa13.68□□□□□ -0.22
NFKB1-205ENST00000505458 PDIA4P13667 645 aaKnown RBP13.67□□□□□ -0.22
NFKB1-205ENST00000505458 HSP90B1P14625 803 aaKnown RBP13.67□□□□□ -0.22
NFKB1-205ENST00000505458 RNF20Q5VTR2 975 aa13.67□□□□□ -0.22
NFKB1-205ENST00000505458 BARGINQ6ZT62 677 aa13.67□□□□□ -0.22
NFKB1-205ENST00000505458 TTLL7Q6ZT98 887 aa13.67□□□□□ -0.22
NFKB1-205ENST00000505458 SPRYD3Q8NCJ5 442 aa13.67□□□□□ -0.22
NFKB1-205ENST00000505458 ERVV-1B6SEH8 477 aa13.67□□□□□ -0.22
NFKB1-205ENST00000505458 FOXO4P98177 505 aa13.67□□□□□ -0.22
NFKB1-205ENST00000505458 EPHA10Q5JZY3 1008 aa13.67□□□□□ -0.22
NFKB1-205ENST00000505458 LMBR1LQ6UX01 489 aa13.67□□□□□ -0.22
NFKB1-205ENST00000505458 KCNB2Q92953 911 aa13.67□□□□□ -0.22
NFKB1-205ENST00000505458 ABCC12Q96J65 1359 aa13.67□□□□□ -0.22
NFKB1-205ENST00000505458 ATP5J2-PTCD1G3V325 749 aa13.67□□□□□ -0.22
NFKB1-205ENST00000505458 CD2BP2O95400 341 aaKnown RBP13.67□□□□□ -0.22
NFKB1-205ENST00000505458 ZKSCAN1P17029 563 aaPredicted RBP13.67□□□□□ -0.22
NFKB1-205ENST00000505458 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.67□□□□□ -0.22
NFKB1-205ENST00000505458 AK7Q96M32 723 aa13.67□□□□□ -0.22
NFKB1-205ENST00000505458 CUL4AQ13619 759 aa13.66□□□□□ -0.22
NFKB1-205ENST00000505458 HMG20BQ9P0W2 317 aa13.66□□□□□ -0.22
NFKB1-205ENST00000505458 IL6STP40189 918 aaPredicted RBP13.66□□□□□ -0.22
NFKB1-205ENST00000505458 GIGYF2Q6Y7W6 1299 aaKnown RBP13.66□□□□□ -0.22
NFKB1-205ENST00000505458 RREB1Q92766 1687 aa13.66□□□□□ -0.22
NFKB1-205ENST00000505458 L1TD1Q5T7N2 865 aaKnown RBP13.66□□□□□ -0.22
NFKB1-205ENST00000505458 TNPO1Q92973 898 aaKnown RBP13.66□□□□□ -0.22
NFKB1-205ENST00000505458 SIL1Q9H173 461 aa13.66□□□□□ -0.22
NFKB1-205ENST00000505458 AKAP2Q9Y2D5 859 aa13.66□□□□□ -0.22
NFKB1-205ENST00000505458 FSD1Q9BTV5 496 aa13.65□□□□□ -0.22
NFKB1-205ENST00000505458 SLIT2O94813 1529 aa13.65□□□□□ -0.22
NFKB1-205ENST00000505458 EYA2O00167 538 aa13.65□□□□□ -0.22
NFKB1-205ENST00000505458 PSMA5P28066 241 aa13.65□□□□□ -0.22
NFKB1-205ENST00000505458 DDB1Q16531 1140 aa13.65□□□□□ -0.22
NFKB1-205ENST00000505458 DNAJC10Q8IXB1 793 aa13.65□□□□□ -0.22
NFKB1-205ENST00000505458 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
NFKB1-205ENST00000505458 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
NFKB1-205ENST00000505458 CCDC171Q6TFL3 1326 aa13.65□□□□□ -0.22
NFKB1-205ENST00000505458 CWC27Q6UX04 472 aaKnown RBP13.65□□□□□ -0.22
NFKB1-205ENST00000505458 ZBTB38Q8NAP3 1195 aaPredicted RBP13.65□□□□□ -0.22
NFKB1-205ENST00000505458 RGL2O15211 777 aa13.64□□□□□ -0.23
NFKB1-205ENST00000505458 ZSCAN31Q96LW9 406 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-205ENST00000505458 ASAP1Q9ULH1 1129 aa13.64□□□□□ -0.23
NFKB1-205ENST00000505458 MYH3P11055 1940 aa13.64□□□□□ -0.23
NFKB1-205ENST00000505458 JCADQ9P266 1359 aa13.64□□□□□ -0.23
NFKB1-205ENST00000505458 CCDC57Q2TAC2 916 aa13.64□□□□□ -0.23
NFKB1-205ENST00000505458 CCDC8Q9H0W5 538 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-205ENST00000505458 SPATA31A5Q5VU36 1347 aa13.64□□□□□ -0.23
NFKB1-205ENST00000505458 SPATA31A7Q8IWB4 1347 aa13.64□□□□□ -0.23
NFKB1-205ENST00000505458 CYP19A1P11511 503 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-205ENST00000505458 MED23Q9ULK4 1368 aa13.64□□□□□ -0.23
NFKB1-205ENST00000505458 ZNF609O15014 1411 aa13.63□□□□□ -0.23
NFKB1-205ENST00000505458 PIP4K2AP48426 406 aaPredicted RBP13.63□□□□□ -0.23
NFKB1-205ENST00000505458 TFCP2Q12800 502 aa13.63□□□□□ -0.23
NFKB1-205ENST00000505458 KRT32Q14532 448 aa13.63□□□□□ -0.23
NFKB1-205ENST00000505458 TMX3Q96JJ7 454 aa13.63□□□□□ -0.23
NFKB1-205ENST00000505458 HAUS7Q99871 368 aa13.63□□□□□ -0.23
NFKB1-205ENST00000505458 PALLDQ8WX93 1383 aa13.63□□□□□ -0.23
NFKB1-205ENST00000505458 SH2B1Q9NRF2 756 aaPredicted RBP13.63□□□□□ -0.23
NFKB1-205ENST00000505458 CHMP3Q9Y3E7 222 aa13.63□□□□□ -0.23
NFKB1-205ENST00000505458 MAP4K4O95819 1239 aaPredicted RBP13.62□□□□□ -0.23
NFKB1-205ENST00000505458 CYP2E1P05181 493 aaPredicted RBP13.62□□□□□ -0.23
NFKB1-205ENST00000505458 DBNLQ9UJU6 430 aaKnown RBP13.62□□□□□ -0.23
NFKB1-205ENST00000505458 SNX14Q9Y5W7 946 aa13.62□□□□□ -0.23
NFKB1-205ENST00000505458 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.62□□□□□ -0.23
NFKB1-205ENST00000505458 ANKRD1Q15327 319 aa13.62□□□□□ -0.23
NFKB1-205ENST00000505458 CEP126Q9P2H0 1117 aa13.62□□□□□ -0.23
NFKB1-205ENST00000505458 TRAK2O60296 914 aa13.62□□□□□ -0.23
NFKB1-205ENST00000505458 VPS53Q5VIR6 699 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms