RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 EGFL7Q9UHF1 273 aa9.48□□□□□ -0.89
COPS4-203ENST00000504274 IVNS1ABPQ9Y6Y0 642 aa9.48□□□□□ -0.89
COPS4-203ENST00000504274 ICMTO60725 284 aa9.47□□□□□ -0.89
COPS4-203ENST00000504274 NPR3P17342 541 aa9.47□□□□□ -0.89
COPS4-203ENST00000504274 H3BRB1 525 aa9.46□□□□□ -0.9
COPS4-203ENST00000504274 MX2P20592 715 aa9.46□□□□□ -0.9
COPS4-203ENST00000504274 ZAP70P43403 619 aa9.46□□□□□ -0.9
COPS4-203ENST00000504274 ARSDP51689 593 aa9.46□□□□□ -0.9
COPS4-203ENST00000504274 KCNQ4P56696 695 aa9.46□□□□□ -0.9
COPS4-203ENST00000504274 TUT1Q9H6E5 874 aaKnown RBP9.46□□□□□ -0.9
COPS4-203ENST00000504274 MBIPQ9NS73 344 aa9.46□□□□□ -0.9
COPS4-203ENST00000504274 MARK1Q9P0L2 795 aa9.46□□□□□ -0.9
COPS4-203ENST00000504274 KCNH4Q9UQ05 1017 aa9.46□□□□□ -0.9
COPS4-203ENST00000504274 EIF1AXP47813 144 aaKnown RBP9.45□□□□□ -0.9
COPS4-203ENST00000504274 SF3B2Q13435 895 aaKnown RBP9.45□□□□□ -0.9
COPS4-203ENST00000504274 LAMC2Q13753 1193 aa9.45□□□□□ -0.9
COPS4-203ENST00000504274 ABTB2Q8N961 1025 aa9.45□□□□□ -0.9
COPS4-203ENST00000504274 SLC30A3Q99726 388 aa9.45□□□□□ -0.9
COPS4-203ENST00000504274 SOWAHDA6NJG2 315 aa9.44□□□□□ -0.9
COPS4-203ENST00000504274 NOM1Q5C9Z4 860 aaKnown RBP9.44□□□□□ -0.9
COPS4-203ENST00000504274 RGL4Q8IZJ4 473 aa9.44□□□□□ -0.9
COPS4-203ENST00000504274 RTCBQ9Y3I0 505 aaKnown RBP9.44□□□□□ -0.9
COPS4-203ENST00000504274 IGF1RP08069 1367 aa9.44□□□□□ -0.9
COPS4-203ENST00000504274 FAM13AO94988 1023 aa9.43□□□□□ -0.9
COPS4-203ENST00000504274 BMP4P12644 408 aa9.43□□□□□ -0.9
COPS4-203ENST00000504274 FAM182BQ5T319 152 aa9.43□□□□□ -0.9
COPS4-203ENST00000504274 GPR152Q8TDT2 470 aa9.43□□□□□ -0.9
COPS4-203ENST00000504274 ADAMTS2O95450 1211 aa9.42□□□□□ -0.9
COPS4-203ENST00000504274 RAB44Q7Z6P3 723 aaPredicted RBP9.42□□□□□ -0.9
COPS4-203ENST00000504274 GLYCTKQ8IVS8 523 aa9.42□□□□□ -0.9
COPS4-203ENST00000504274 CMTR1Q8N1G2 835 aaKnown RBP9.42□□□□□ -0.9
COPS4-203ENST00000504274 KCTD17Q8N5Z5 321 aa9.42□□□□□ -0.9
COPS4-203ENST00000504274 KCNMB2Q9Y691 235 aa9.42□□□□□ -0.9
COPS4-203ENST00000504274 WIPF1O43516 503 aa9.41□□□□□ -0.9
COPS4-203ENST00000504274 ARHGAP4P98171 946 aa9.41□□□□□ -0.9
COPS4-203ENST00000504274 SRSF11Q05519 484 aaKnown RBP9.41□□□□□ -0.9
COPS4-203ENST00000504274 SPEM2Q0P670 501 aa9.41□□□□□ -0.9
COPS4-203ENST00000504274 TRIP4Q15650 581 aaPredicted RBP9.41□□□□□ -0.9
COPS4-203ENST00000504274 EDEM1Q92611 657 aa9.41□□□□□ -0.9
COPS4-203ENST00000504274 GSX2Q9BZM3 304 aa9.41□□□□□ -0.9
COPS4-203ENST00000504274 FZD6O60353 706 aa9.4□□□□□ -0.9
COPS4-203ENST00000504274 WHAMMQ8TF30 809 aa9.4□□□□□ -0.9
COPS4-203ENST00000504274 CCDC87Q9NVE4 849 aa9.4□□□□□ -0.9
COPS4-203ENST00000504274 KLF15Q9UIH9 416 aa9.4□□□□□ -0.9
COPS4-203ENST00000504274 SLURP2P0DP57 97 aa9.39□□□□□ -0.91
COPS4-203ENST00000504274 EPB42P16452 691 aa9.39□□□□□ -0.91
COPS4-203ENST00000504274 DNM1Q05193 864 aaKnown RBP9.39□□□□□ -0.91
COPS4-203ENST00000504274 ACDQ96AP0 544 aa9.39□□□□□ -0.91
COPS4-203ENST00000504274 PDGFAP04085 211 aa9.38□□□□□ -0.91
COPS4-203ENST00000504274 LORP23490 312 aaPredicted RBP9.38□□□□□ -0.91
COPS4-203ENST00000504274 MAP2K3P46734 347 aa9.38□□□□□ -0.91
COPS4-203ENST00000504274 PCBP4P57723 403 aaKnown RBP9.38□□□□□ -0.91
COPS4-203ENST00000504274 AAMPQ13685 434 aa9.38□□□□□ -0.91
COPS4-203ENST00000504274 ALKBH2Q6NS38 261 aa9.38□□□□□ -0.91
COPS4-203ENST00000504274 KRT25Q7Z3Z0 450 aa9.38□□□□□ -0.91
COPS4-203ENST00000504274 PIK3R5Q8WYR1 880 aa9.38□□□□□ -0.91
COPS4-203ENST00000504274 NUDT16Q96DE0 195 aaKnown RBP9.38□□□□□ -0.91
COPS4-203ENST00000504274 PRR12Q9ULL5 1215 aa9.38□□□□□ -0.91
COPS4-203ENST00000504274 POLIQ9UNA4 740 aa9.38□□□□□ -0.91
COPS4-203ENST00000504274 NSFL1CQ9UNZ2 370 aaKnown RBP9.38□□□□□ -0.91
COPS4-203ENST00000504274 XYLBO75191 536 aa9.37□□□□□ -0.91
COPS4-203ENST00000504274 SASH3O75995 380 aa9.37□□□□□ -0.91
COPS4-203ENST00000504274 CCINQ13939 588 aa9.37□□□□□ -0.91
COPS4-203ENST00000504274 ZNF468Q5VIY5 522 aaPredicted RBP9.37□□□□□ -0.91
COPS4-203ENST00000504274 SYT9Q86SS6 491 aa9.37□□□□□ -0.91
COPS4-203ENST00000504274 BHMTQ93088 406 aa9.37□□□□□ -0.91
COPS4-203ENST00000504274 GGNBP2Q9H3C7 697 aa9.37□□□□□ -0.91
COPS4-203ENST00000504274 ZFATQ9P243 1243 aa9.37□□□□□ -0.91
COPS4-203ENST00000504274 PATL2C9JE40 543 aaKnown RBP9.36□□□□□ -0.91
COPS4-203ENST00000504274 TARSP26639 723 aaKnown RBP9.36□□□□□ -0.91
COPS4-203ENST00000504274 MZF1P28698 734 aaPredicted RBP9.36□□□□□ -0.91
COPS4-203ENST00000504274 LYPD4Q6UWN0 246 aa9.36□□□□□ -0.91
COPS4-203ENST00000504274 C1orf229Q6ZS94 237 aaPredicted RBP9.36□□□□□ -0.91
COPS4-203ENST00000504274 OXCT2Q9BYC2 517 aaPredicted RBP9.36□□□□□ -0.91
COPS4-203ENST00000504274 FAM13BQ9NYF5 915 aa9.36□□□□□ -0.91
COPS4-203ENST00000504274 BIN2Q9UBW5 565 aaPredicted RBP9.36□□□□□ -0.91
COPS4-203ENST00000504274 GGA1Q9UJY5 639 aa9.36□□□□□ -0.91
COPS4-203ENST00000504274 A6NHS1 94 aa9.35□□□□□ -0.91
COPS4-203ENST00000504274 UBAP1LF5GYI3 381 aa9.35□□□□□ -0.91
COPS4-203ENST00000504274 EGFRP00533 1210 aa9.35□□□□□ -0.91
COPS4-203ENST00000504274 ARAFP10398 606 aa9.35□□□□□ -0.91
COPS4-203ENST00000504274 NFKB1P19838 968 aa9.35□□□□□ -0.91
COPS4-203ENST00000504274 NEURL1BA8MQ27 555 aa9.34□□□□□ -0.91
COPS4-203ENST00000504274 FCHSD1Q86WN1 690 aa9.34□□□□□ -0.91
COPS4-203ENST00000504274 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.34□□□□□ -0.91
COPS4-203ENST00000504274 CELA2BP08218 269 aaPredicted RBP9.33□□□□□ -0.92
COPS4-203ENST00000504274 ZNF385CQ66K41 422 aaPredicted RBP9.33□□□□□ -0.92
COPS4-203ENST00000504274 C11orf16Q9NQ32 467 aa9.33□□□□□ -0.92
COPS4-203ENST00000504274 ADH6P28332 368 aa9.32□□□□□ -0.92
COPS4-203ENST00000504274 PNMA5Q96PV4 448 aa9.32□□□□□ -0.92
COPS4-203ENST00000504274 GZF1Q9H116 711 aaPredicted RBP9.32□□□□□ -0.92
COPS4-203ENST00000504274 AVENQ9NQS1 362 aaPredicted RBP9.32□□□□□ -0.92
COPS4-203ENST00000504274 BRPF3Q9ULD4 1205 aa9.32□□□□□ -0.92
COPS4-203ENST00000504274 SIN3BO75182 1162 aa9.31□□□□□ -0.92
COPS4-203ENST00000504274 RARAP10276 462 aa9.31□□□□□ -0.92
COPS4-203ENST00000504274 C8orf34Q49A92 452 aa9.31□□□□□ -0.92
COPS4-203ENST00000504274 NLRP13Q86W25 1043 aa9.31□□□□□ -0.92
COPS4-203ENST00000504274 GJD3Q8N144 294 aa9.31□□□□□ -0.92
COPS4-203ENST00000504274 MDFIQ99750 246 aa9.31□□□□□ -0.92
COPS4-203ENST00000504274 BCRP11274 1271 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms