RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 PLEKHG5O94827 1062 aa5.59□□□□□ -1.51
NDFIP1-202ENST00000503388 FGFR1OPO95684 399 aaKnown RBP5.59□□□□□ -1.51
NDFIP1-202ENST00000503388 CCDC183Q5T5S1 534 aa5.59□□□□□ -1.51
NDFIP1-202ENST00000503388 ZSCAN30Q86W11 494 aa5.59□□□□□ -1.51
NDFIP1-202ENST00000503388 SSH1Q8WYL5 1049 aa5.59□□□□□ -1.51
NDFIP1-202ENST00000503388 BCAR3O75815 825 aa5.59□□□□□ -1.51
NDFIP1-202ENST00000503388 KLHL40Q2TBA0 621 aa5.59□□□□□ -1.51
NDFIP1-202ENST00000503388 TMTC2Q8N394 836 aa5.59□□□□□ -1.51
NDFIP1-202ENST00000503388 TMEM57Q8N5G2 664 aa5.59□□□□□ -1.51
NDFIP1-202ENST00000503388 SPRYD3Q8NCJ5 442 aa5.59□□□□□ -1.51
NDFIP1-202ENST00000503388 LRRC27Q9C0I9 530 aa5.59□□□□□ -1.51
NDFIP1-202ENST00000503388 LIMCH1Q9UPQ0 1083 aa5.59□□□□□ -1.51
NDFIP1-202ENST00000503388 POTEB2H3BUK9 544 aa5.59□□□□□ -1.52
NDFIP1-202ENST00000503388 ERLIN1O75477 346 aa5.59□□□□□ -1.52
NDFIP1-202ENST00000503388 IMMTQ16891 758 aaKnown RBP5.59□□□□□ -1.52
NDFIP1-202ENST00000503388 NUTM2DQ5VT03 806 aaPredicted RBP5.59□□□□□ -1.52
NDFIP1-202ENST00000503388 MNS1Q8NEH6 495 aa5.59□□□□□ -1.52
NDFIP1-202ENST00000503388 NOC3LQ8WTT2 800 aaKnown RBP5.59□□□□□ -1.52
NDFIP1-202ENST00000503388 DNAAF4Q8WXU2 420 aa5.59□□□□□ -1.52
NDFIP1-202ENST00000503388 TOMM22Q9NS69 142 aa5.59□□□□□ -1.52
NDFIP1-202ENST00000503388 CPSF1Q10570 1443 aaKnown RBP5.59□□□□□ -1.52
NDFIP1-202ENST00000503388 BTBD11A6QL63 1104 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 RRP9O43818 475 aaKnown RBP5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 UQCRFS1P1P0C7P4 283 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 HSP90B2PQ58FF3 399 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 RBM33Q96EV2 1170 aaKnown RBP5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 FMNL2Q96PY5 1086 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 CDCA7Q9BWT1 371 aaPredicted RBP5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 PDRG1Q9NUG6 133 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 ANO10Q9NW15 660 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 ARHGEF10O15013 1369 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 ERBB4Q15303 1308 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 MYO1BO43795 1136 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 HOXA7P31268 230 aaPredicted RBP5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 STK38Q15208 465 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 TTC39AQ5SRH9 613 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 CCDC83Q8IWF9 413 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 ECHDC1Q9NTX5 307 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 SBNO1A3KN83 1393 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 PPP1R2P41236 205 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 DCTN1Q14203 1278 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 ESCO1Q5FWF5 840 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 ANKRD24Q8TF21 1146 aa5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 MAGEC2Q9UBF1 373 aaPredicted RBP5.58□□□□□ -1.52
NDFIP1-202ENST00000503388 ECM29Q5VYK3 1845 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 SRGAP3O43295 1099 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 IGSF3O75054 1194 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 EIF3JO75822 258 aaKnown RBP5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 TERF1P54274 439 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 TTC22Q5TAA0 569 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 IFNL2Q8IZJ0 200 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 NUP62CLQ9H1M0 184 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 ADGRL3Q9HAR2 1447 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 RAPGEF3O95398 923 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 APPP05067 770 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 TRIM27P14373 513 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 MAP3K11Q16584 847 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 AKAP4Q5JQC9 854 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 LARP1BQ659C4 914 aaKnown RBP5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 FMNL3Q8IVF7 1028 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 PRIMPOLQ96LW4 560 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 TNMDQ9H2S6 317 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 CD163L1Q9NR16 1453 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 NPHP3Q7Z494 1330 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 ZSCAN12O43309 604 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 WASHC4Q2M389 1173 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 CCDC12Q8WUD4 166 aaPredicted RBP5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 DNAI2Q9GZS0 605 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 FBXO3Q9UK99 471 aa5.57□□□□□ -1.52
NDFIP1-202ENST00000503388 PLEKHG3A1L390 1219 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 IFIT1P09914 478 aaKnown RBP5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 PPP2R5BQ15173 497 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 HOMER1Q86YM7 354 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 RAB34Q9BZG1 259 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 TSPYL1Q9H0U9 437 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 DCTPP1Q9H773 170 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 ESPNB1AK53 854 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 FYB1O15117 783 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 LDHCP07864 332 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 CREBRFQ8IUR6 639 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 BMP2KQ9NSY1 1161 aaPredicted RBP5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 AMOTL2Q9Y2J4 779 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 SSC5DA1L4H1 1573 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 RBM25P49756 843 aaKnown RBP5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 UBE2HP62256 183 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 ATP8B2P98198 1209 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 FLIIQ13045 1269 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 TRIM5Q9C035 493 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 IBTKQ9P2D0 1353 aaPredicted RBP5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 ERLIN2O94905 339 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 IGHMBP2P38935 993 aaKnown RBP5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 SPTY2D1Q68D10 685 aaPredicted RBP5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 CCDC112Q8NEF3 446 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 TSR2Q969E8 191 aaKnown RBP5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 NEUROD6Q96NK8 337 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 RUFY1Q96T51 708 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 FAM107BQ9H098 131 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 CNNM2Q9H8M5 875 aa5.56□□□□□ -1.52
NDFIP1-202ENST00000503388 MAP3K5Q99683 1374 aa5.55□□□□□ -1.52
NDFIP1-202ENST00000503388 CCDC69A6NI79 296 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms