RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, human

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-213	ENST00000501412	TFCP2L1	Q9NZI6	479 aa		27.95	■■■□□ 2.06
RAP1B-213	ENST00000501412	ZNF652	Q9Y2D9	606 aa		27.95	■■■□□ 2.06
RAP1B-213	ENST00000501412		H7C1W4	665 aa		27.94	■■■□□ 2.06
RAP1B-213	ENST00000501412	ZPR1	O75312	459 aa		27.94	■■■□□ 2.06
RAP1B-213	ENST00000501412	UBTFL1	P0CB47	393 aa	Predicted RBP	27.94	■■■□□ 2.06
RAP1B-213	ENST00000501412	GPT	P24298	496 aa		27.94	■■■□□ 2.06
RAP1B-213	ENST00000501412	GNAI2	P04899	355 aa		27.93	■■■□□ 2.06
RAP1B-213	ENST00000501412	B4GALNT3	Q6L9W6	998 aa		27.93	■■■□□ 2.06
RAP1B-213	ENST00000501412	SLC15A2	Q16348	729 aa		27.92	■■■□□ 2.06
RAP1B-213	ENST00000501412	PNPLA7	Q6ZV29	1317 aa		27.91	■■■□□ 2.06
RAP1B-213	ENST00000501412	COL23A1	Q86Y22	540 aa	Predicted RBP	27.91	■■■□□ 2.06
RAP1B-213	ENST00000501412	KAZALD1	Q96I82	304 aa		27.91	■■■□□ 2.06
RAP1B-213	ENST00000501412	LRRFIP2	Q9Y608	721 aa	Known RBP	27.91	■■■□□ 2.06
RAP1B-213	ENST00000501412	COL24A1	Q17RW2	1714 aa		27.91	■■■□□ 2.06
RAP1B-213	ENST00000501412	SIRT2	Q8IXJ6	389 aa		27.9	■■■□□ 2.06
RAP1B-213	ENST00000501412	CCDC136	Q96JN2	1154 aa		27.9	■■■□□ 2.06
RAP1B-213	ENST00000501412	PSD	A5PKW4	1024 aa	Predicted RBP	27.89	■■■□□ 2.06
RAP1B-213	ENST00000501412	GYS1	P13807	737 aa		27.89	■■■□□ 2.06
RAP1B-213	ENST00000501412	TBC1D9B	Q66K14	1250 aa		27.89	■■■□□ 2.06
RAP1B-213	ENST00000501412	CEP85	Q6P2H3	762 aa		27.89	■■■□□ 2.06
RAP1B-213	ENST00000501412	UBE3B	Q7Z3V4	1068 aa		27.89	■■■□□ 2.06
RAP1B-213	ENST00000501412	FLAD1	Q8NFF5	587 aa		27.89	■■■□□ 2.06
RAP1B-213	ENST00000501412	SUCLG2	Q96I99	432 aa		27.89	■■■□□ 2.06
RAP1B-213	ENST00000501412	NIP7	Q9Y221	180 aa	Known RBP eCLIP	27.89	■■■□□ 2.06
RAP1B-213	ENST00000501412	PCCA	P05165	728 aa	Predicted RBP	27.89	■■■□□ 2.05
RAP1B-213	ENST00000501412	PARP10	Q53GL7	1025 aa		27.89	■■■□□ 2.05
RAP1B-213	ENST00000501412	JARID2	Q92833	1246 aa	Predicted RBP	27.89	■■■□□ 2.05
RAP1B-213	ENST00000501412	STK32B	Q9NY57	414 aa		27.89	■■■□□ 2.05
RAP1B-213	ENST00000501412	SUSD4	Q5VX71	490 aa		27.88	■■■□□ 2.05
RAP1B-213	ENST00000501412	ANKRD44	Q8N8A2	993 aa		27.88	■■■□□ 2.05
RAP1B-213	ENST00000501412	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.88	■■■□□ 2.05
RAP1B-213	ENST00000501412	IGHD	P01880	384 aa		27.87	■■■□□ 2.05
RAP1B-213	ENST00000501412	HDAC1	Q13547	482 aa	Predicted RBP	27.86	■■■□□ 2.05
RAP1B-213	ENST00000501412	RPAP2	Q8IXW5	612 aa	Predicted RBP	27.86	■■■□□ 2.05
RAP1B-213	ENST00000501412	KDM2B	Q8NHM5	1336 aa		27.86	■■■□□ 2.05
RAP1B-213	ENST00000501412	NTSR2	O95665	410 aa		27.85	■■■□□ 2.05
RAP1B-213	ENST00000501412	HDAC5	Q9UQL6	1122 aa		27.85	■■■□□ 2.05
RAP1B-213	ENST00000501412	CDHR2	Q9BYE9	1310 aa		27.85	■■■□□ 2.05
RAP1B-213	ENST00000501412	EPHA10	Q5JZY3	1008 aa		27.84	■■■□□ 2.05
RAP1B-213	ENST00000501412	FAM89A	Q96GI7	184 aa		27.84	■■■□□ 2.05
RAP1B-213	ENST00000501412	MTX1	Q13505	466 aa		27.83	■■■□□ 2.05
RAP1B-213	ENST00000501412	R3HDM1	Q15032	1099 aa	Known RBP	27.83	■■■□□ 2.05
RAP1B-213	ENST00000501412	SYNE4	Q8N205	404 aa		27.83	■■■□□ 2.05
RAP1B-213	ENST00000501412	ATP8B2	P98198	1209 aa		27.83	■■■□□ 2.04
RAP1B-213	ENST00000501412	NFIX	Q14938	502 aa		27.83	■■■□□ 2.04
RAP1B-213	ENST00000501412	UTP14A	Q9BVJ6	771 aa	Known RBP	27.83	■■■□□ 2.04
RAP1B-213	ENST00000501412	BICC1	Q9H694	974 aa	Known RBP	27.83	■■■□□ 2.04
RAP1B-213	ENST00000501412	TRMT112	Q9UI30	125 aa	Known RBP	27.83	■■■□□ 2.04
RAP1B-213	ENST00000501412	RABL6	Q3YEC7	729 aa	Predicted RBP	27.82	■■■□□ 2.04
RAP1B-213	ENST00000501412	RTL5	Q5HYW3	569 aa	Predicted RBP	27.82	■■■□□ 2.04
RAP1B-213	ENST00000501412	PPP1R42	Q7Z4L9	355 aa		27.82	■■■□□ 2.04
RAP1B-213	ENST00000501412	PLA2G12B	Q9BX93	195 aa		27.82	■■■□□ 2.04
RAP1B-213	ENST00000501412	PNMA6E	A0A0J9YXQ4	647 aa		27.81	■■■□□ 2.04
RAP1B-213	ENST00000501412	TM4SF1	P30408	202 aa		27.81	■■■□□ 2.04
RAP1B-213	ENST00000501412	FOXO4	P98177	505 aa		27.81	■■■□□ 2.04
RAP1B-213	ENST00000501412	BICDL1	Q6ZP65	573 aa		27.81	■■■□□ 2.04
RAP1B-213	ENST00000501412	SETDB2	Q96T68	719 aa		27.81	■■■□□ 2.04
RAP1B-213	ENST00000501412	RWDD1	Q9H446	243 aa	Predicted RBP	27.8	■■■□□ 2.04
RAP1B-213	ENST00000501412	LRP5	O75197	1615 aa		27.79	■■■□□ 2.04
RAP1B-213	ENST00000501412	DDX60	Q8IY21	1712 aa	Known RBP	27.79	■■■□□ 2.04
RAP1B-213	ENST00000501412	LAMB2	P55268	1798 aa		27.79	■■■□□ 2.04
RAP1B-213	ENST00000501412	POLA2	Q14181	598 aa		27.79	■■■□□ 2.04
RAP1B-213	ENST00000501412	SH3TC1	Q8TE82	1336 aa		27.79	■■■□□ 2.04
RAP1B-213	ENST00000501412	SSH3	Q8TE77	659 aa		27.78	■■■□□ 2.04
RAP1B-213	ENST00000501412	CARMIL3	Q8ND23	1372 aa		27.78	■■■□□ 2.04
RAP1B-213	ENST00000501412	FAM177B	A6PVY3	158 aa		27.76	■■■□□ 2.04
RAP1B-213	ENST00000501412	IRS4	O14654	1257 aa	Predicted RBP	27.76	■■■□□ 2.04
RAP1B-213	ENST00000501412	CENPQ	Q7L2Z9	268 aa	Predicted RBP	27.76	■■■□□ 2.04
RAP1B-213	ENST00000501412	MYH3	P11055	1940 aa		27.76	■■■□□ 2.03
RAP1B-213	ENST00000501412	MSH5	O43196	834 aa		27.76	■■■□□ 2.03
RAP1B-213	ENST00000501412	NUTM1	Q86Y26	1132 aa		27.76	■■■□□ 2.03
RAP1B-213	ENST00000501412	NLGN1	Q8N2Q7	840 aa		27.76	■■■□□ 2.03
RAP1B-213	ENST00000501412	DDR1	Q08345	913 aa		27.75	■■■□□ 2.03
RAP1B-213	ENST00000501412	NYX	Q9GZU5	481 aa		27.75	■■■□□ 2.03
RAP1B-213	ENST00000501412	SRGAP3	O43295	1099 aa		27.74	■■■□□ 2.03
RAP1B-213	ENST00000501412	HMMR	O75330	724 aa		27.74	■■■□□ 2.03
RAP1B-213	ENST00000501412	SMC5	Q8IY18	1101 aa		27.74	■■■□□ 2.03
RAP1B-213	ENST00000501412	PDGFD	Q9GZP0	370 aa	Predicted RBP	27.74	■■■□□ 2.03
RAP1B-213	ENST00000501412	POLRMT	O00411	1230 aa	Known RBP	27.73	■■■□□ 2.03
RAP1B-213	ENST00000501412	CSF1R	P07333	972 aa		27.73	■■■□□ 2.03
RAP1B-213	ENST00000501412	ERFE	Q4G0M1	354 aa		27.73	■■■□□ 2.03
RAP1B-213	ENST00000501412	SLC10A5	Q5PT55	438 aa		27.73	■■■□□ 2.03
RAP1B-213	ENST00000501412	LMBR1L	Q6UX01	489 aa		27.73	■■■□□ 2.03
RAP1B-213	ENST00000501412	NBPF5P	Q86XG9	351 aa	Predicted RBP	27.73	■■■□□ 2.03
RAP1B-213	ENST00000501412	NRXN2	Q9P2S2	1712 aa		27.73	■■■□□ 2.03
RAP1B-213	ENST00000501412	ABCC12	Q96J65	1359 aa		27.73	■■■□□ 2.03
RAP1B-213	ENST00000501412	PDE8A	O60658	829 aa		27.72	■■■□□ 2.03
RAP1B-213	ENST00000501412	DCTPP1	Q9H773	170 aa		27.72	■■■□□ 2.03
RAP1B-213	ENST00000501412	HCLS1	P14317	486 aa	Predicted RBP	27.71	■■■□□ 2.03
RAP1B-213	ENST00000501412	TPTE2	Q6XPS3	522 aa		27.71	■■■□□ 2.03
RAP1B-213	ENST00000501412	RFX5	P48382	616 aa	Predicted RBP	27.7	■■■□□ 2.03
RAP1B-213	ENST00000501412	CTSW	P56202	376 aa		27.7	■■■□□ 2.03
RAP1B-213	ENST00000501412	CASZ1	Q86V15	1759 aa		27.7	■■■□□ 2.02
RAP1B-213	ENST00000501412	TTLL11	Q8NHH1	800 aa		27.7	■■■□□ 2.02
RAP1B-213	ENST00000501412	SERPINB2	P05120	415 aa		27.69	■■■□□ 2.02
RAP1B-213	ENST00000501412	RIC1	Q4ADV7	1423 aa		27.68	■■■□□ 2.02
RAP1B-213	ENST00000501412	MSL1	Q68DK7	614 aa		27.68	■■■□□ 2.02
RAP1B-213	ENST00000501412	PRR5L	Q6MZQ0	368 aa		27.68	■■■□□ 2.02
RAP1B-213	ENST00000501412	GCC1	Q96CN9	775 aa		27.68	■■■□□ 2.02
RAP1B-213	ENST00000501412	HSP90B1	P14625	803 aa	Known RBP	27.67	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms