RNA–Protein interactions for RNA: ENST00000498803.5

SPIRE1-211, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-211ENST00000498803 CASC1Q6TDU7 716 aa10.4□□□□□ -0.74
SPIRE1-211ENST00000498803 NLRP10Q86W26 655 aa10.4□□□□□ -0.74
SPIRE1-211ENST00000498803 CLASRPQ8N2M8 674 aaKnown RBP10.4□□□□□ -0.74
SPIRE1-211ENST00000498803 STAP2Q9UGK3 403 aa10.4□□□□□ -0.74
SPIRE1-211ENST00000498803 CCNL1Q9UK58 526 aaPredicted RBP10.4□□□□□ -0.74
SPIRE1-211ENST00000498803 FBXO3Q9UK99 471 aa10.4□□□□□ -0.74
SPIRE1-211ENST00000498803 NUP188Q5SRE5 1749 aa10.39□□□□□ -0.75
SPIRE1-211ENST00000498803 RPS6KA4O75676 772 aa10.39□□□□□ -0.75
SPIRE1-211ENST00000498803 MX1P20591 662 aa10.39□□□□□ -0.75
SPIRE1-211ENST00000498803 RXRBP28702 533 aa10.39□□□□□ -0.75
SPIRE1-211ENST00000498803 TTC22Q5TAA0 569 aa10.39□□□□□ -0.75
SPIRE1-211ENST00000498803 ZNF34Q8IZ26 560 aa10.39□□□□□ -0.75
SPIRE1-211ENST00000498803 TBC1D2BQ9UPU7 963 aa10.39□□□□□ -0.75
SPIRE1-211ENST00000498803 RREB1Q92766 1687 aa10.38□□□□□ -0.75
SPIRE1-211ENST00000498803 SMARCA5O60264 1052 aaPredicted RBP10.38□□□□□ -0.75
SPIRE1-211ENST00000498803 CAMTA2O94983 1202 aa10.38□□□□□ -0.75
SPIRE1-211ENST00000498803 PDE1AP54750 535 aa10.38□□□□□ -0.75
SPIRE1-211ENST00000498803 FOXO4P98177 505 aa10.38□□□□□ -0.75
SPIRE1-211ENST00000498803 HLFQ16534 295 aa10.38□□□□□ -0.75
SPIRE1-211ENST00000498803 LMBR1LQ6UX01 489 aa10.38□□□□□ -0.75
SPIRE1-211ENST00000498803 LINC00116Q8NCU8 138 aa10.38□□□□□ -0.75
SPIRE1-211ENST00000498803 RTCBQ9Y3I0 505 aaKnown RBP10.38□□□□□ -0.75
SPIRE1-211ENST00000498803 TTC41PQ6P2S7 1318 aa10.37□□□□□ -0.75
SPIRE1-211ENST00000498803 ERC2O15083 957 aa10.37□□□□□ -0.75
SPIRE1-211ENST00000498803 CDC45O75419 566 aa10.37□□□□□ -0.75
SPIRE1-211ENST00000498803 ADRA2BP18089 450 aa10.37□□□□□ -0.75
SPIRE1-211ENST00000498803 CCDC57Q2TAC2 916 aa10.37□□□□□ -0.75
SPIRE1-211ENST00000498803 EPHA10Q5JZY3 1008 aa10.37□□□□□ -0.75
SPIRE1-211ENST00000498803 UTP14AQ9BVJ6 771 aaKnown RBP10.37□□□□□ -0.75
SPIRE1-211ENST00000498803 TRMT112Q9UI30 125 aaKnown RBP10.37□□□□□ -0.75
SPIRE1-211ENST00000498803 SH3TC1Q8TE82 1336 aa10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 SALL3Q9BXA9 1300 aa10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 USP42Q9H9J4 1324 aaKnown RBP10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 AFDNP55196 1824 aaKnown RBP10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 PDE8AO60658 829 aa10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 ZPR1O75312 459 aa10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 CIAO1O76071 339 aa10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 CSF1RP07333 972 aa10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 IFIT2P09913 472 aaKnown RBP10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 GPTP24298 496 aa10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 IL15P40933 162 aaPredicted RBP10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 RFX5P48382 616 aaPredicted RBP10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 PTPN12Q05209 780 aaKnown RBP10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 C16orf71Q8IYS4 520 aaPredicted RBP10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 GPR108Q9NPR9 543 aa10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 NARFQ9UHQ1 456 aa10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 CHMP3Q9Y3E7 222 aa10.36□□□□□ -0.75
SPIRE1-211ENST00000498803 BTAF1O14981 1849 aa10.35□□□□□ -0.75
SPIRE1-211ENST00000498803 IRS4O14654 1257 aaPredicted RBP10.35□□□□□ -0.75
SPIRE1-211ENST00000498803 GNPATO15228 680 aa10.35□□□□□ -0.75
SPIRE1-211ENST00000498803 GLRX3O76003 335 aaKnown RBP10.35□□□□□ -0.75
SPIRE1-211ENST00000498803 IFIT5Q13325 482 aaKnown RBP10.35□□□□□ -0.75
SPIRE1-211ENST00000498803 FAM182BQ5T319 152 aa10.35□□□□□ -0.75
SPIRE1-211ENST00000498803 FAM89AQ96GI7 184 aa10.35□□□□□ -0.75
SPIRE1-211ENST00000498803 DDRGK1Q96HY6 314 aa10.35□□□□□ -0.75
SPIRE1-211ENST00000498803 IL1RAPL2Q9NP60 686 aa10.35□□□□□ -0.75
SPIRE1-211ENST00000498803 NIP7Q9Y221 180 aaKnown RBP eCLIP10.35□□□□□ -0.75
SPIRE1-211ENST00000498803 COL5A3P25940 1745 aaPredicted RBP10.35□□□□□ -0.75
SPIRE1-211ENST00000498803 CTSWP56202 376 aa10.34□□□□□ -0.75
SPIRE1-211ENST00000498803 TAF7LQ5H9L4 462 aa10.34□□□□□ -0.75
SPIRE1-211ENST00000498803 TRAPPC3LQ5T215 181 aa10.34□□□□□ -0.75
SPIRE1-211ENST00000498803 PTF1AQ7RTS3 328 aa10.34□□□□□ -0.75
SPIRE1-211ENST00000498803 OTUD7AQ8TE49 926 aaPredicted RBP10.34□□□□□ -0.75
SPIRE1-211ENST00000498803 JARID2Q92833 1246 aaPredicted RBP10.34□□□□□ -0.75
SPIRE1-211ENST00000498803 NYXQ9GZU5 481 aa10.34□□□□□ -0.75
SPIRE1-211ENST00000498803 ECHDC1Q9NTX5 307 aa10.34□□□□□ -0.75
SPIRE1-211ENST00000498803 PA2G4Q9UQ80 394 aaKnown RBP10.34□□□□□ -0.75
SPIRE1-211ENST00000498803 ANKRD18BA2A2Z9 1011 aa10.33□□□□□ -0.76
SPIRE1-211ENST00000498803 EYA2O00167 538 aa10.33□□□□□ -0.76
SPIRE1-211ENST00000498803 PLSCR1O15162 318 aa10.33□□□□□ -0.76
SPIRE1-211ENST00000498803 SASH1O94885 1247 aa10.33□□□□□ -0.76
SPIRE1-211ENST00000498803 TRIM37O94972 964 aa10.33□□□□□ -0.76
SPIRE1-211ENST00000498803 GSPT1P15170 499 aaKnown RBP10.33□□□□□ -0.76
SPIRE1-211ENST00000498803 SDSP20132 328 aa10.33□□□□□ -0.76
SPIRE1-211ENST00000498803 RTL5Q5HYW3 569 aaPredicted RBP10.33□□□□□ -0.76
SPIRE1-211ENST00000498803 AACSQ86V21 672 aa10.33□□□□□ -0.76
SPIRE1-211ENST00000498803 BCL11AQ9H165 835 aa10.33□□□□□ -0.76
SPIRE1-211ENST00000498803 SIL1Q9H173 461 aa10.33□□□□□ -0.76
SPIRE1-211ENST00000498803 AKAP2Q9Y2D5 859 aa10.33□□□□□ -0.76
SPIRE1-211ENST00000498803 UBN2Q6ZU65 1347 aa10.33□□□□□ -0.76
SPIRE1-211ENST00000498803 SSFA2P28290 1259 aa10.32□□□□□ -0.76
SPIRE1-211ENST00000498803 RFC4P35249 363 aa10.32□□□□□ -0.76
SPIRE1-211ENST00000498803 CCDC152Q4G0S7 254 aa10.32□□□□□ -0.76
SPIRE1-211ENST00000498803 SUSD4Q5VX71 490 aa10.32□□□□□ -0.76
SPIRE1-211ENST00000498803 TBC1D9Q6ZT07 1266 aa10.32□□□□□ -0.76
SPIRE1-211ENST00000498803 TICAM2Q86XR7 235 aa10.32□□□□□ -0.76
SPIRE1-211ENST00000498803 NUTM1Q86Y26 1132 aa10.32□□□□□ -0.76
SPIRE1-211ENST00000498803 CNTROBQ8N137 903 aa10.32□□□□□ -0.76
SPIRE1-211ENST00000498803 TTLL11Q8NHH1 800 aa10.32□□□□□ -0.76
SPIRE1-211ENST00000498803 SETDB2Q96T68 719 aa10.32□□□□□ -0.76
SPIRE1-211ENST00000498803 CEP126Q9P2H0 1117 aa10.32□□□□□ -0.76
SPIRE1-211ENST00000498803 SBF2Q86WG5 1849 aa10.32□□□□□ -0.76
SPIRE1-211ENST00000498803 LY75O60449 1722 aa10.32□□□□□ -0.76
SPIRE1-211ENST00000498803 ANKRD36CQ5JPF3 1778 aa10.31□□□□□ -0.76
SPIRE1-211ENST00000498803 RTL9Q8NET4 1388 aa10.31□□□□□ -0.76
SPIRE1-211ENST00000498803 TRIM6-TRIM34B2RNG4 842 aa10.31□□□□□ -0.76
SPIRE1-211ENST00000498803 HIP1O00291 1037 aa10.31□□□□□ -0.76
SPIRE1-211ENST00000498803 EPB41L2O43491 1005 aaKnown RBP10.31□□□□□ -0.76
SPIRE1-211ENST00000498803 REC8O95072 547 aa10.31□□□□□ -0.76
SPIRE1-211ENST00000498803 NTSR2O95665 410 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms