RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 KIF6Q6ZMV9 814 aa20.24■□□□□ 0.83
ATG4B-225ENST00000494465 EAF2Q96CJ1 260 aaPredicted RBP20.24■□□□□ 0.83
ATG4B-225ENST00000494465 LMBR1LQ6UX01 489 aa20.23■□□□□ 0.83
ATG4B-225ENST00000494465 SPATA31A6Q5VVP1 1343 aa20.23■□□□□ 0.83
ATG4B-225ENST00000494465 RTL5Q5HYW3 569 aaPredicted RBP20.23■□□□□ 0.83
ATG4B-225ENST00000494465 AACSQ86V21 672 aa20.23■□□□□ 0.83
ATG4B-225ENST00000494465 ESYT1Q9BSJ8 1104 aa20.23■□□□□ 0.83
ATG4B-225ENST00000494465 RREB1Q92766 1687 aa20.23■□□□□ 0.83
ATG4B-225ENST00000494465 NUP98P52948 1817 aa20.23■□□□□ 0.83
ATG4B-225ENST00000494465 REC8O95072 547 aa20.22■□□□□ 0.83
ATG4B-225ENST00000494465 SNX21Q969T3 373 aa20.22■□□□□ 0.83
ATG4B-225ENST00000494465 GLRX3O76003 335 aaKnown RBP20.22■□□□□ 0.83
ATG4B-225ENST00000494465 IFIT2P09913 472 aaKnown RBP20.22■□□□□ 0.83
ATG4B-225ENST00000494465 GIGYF2Q6Y7W6 1299 aaKnown RBP20.22■□□□□ 0.83
ATG4B-225ENST00000494465 CERKQ8TCT0 537 aa20.22■□□□□ 0.83
ATG4B-225ENST00000494465 ECHDC1Q9NTX5 307 aa20.22■□□□□ 0.83
ATG4B-225ENST00000494465 MAP4K4O95819 1239 aaPredicted RBP20.21■□□□□ 0.83
ATG4B-225ENST00000494465 HLFQ16534 295 aa20.21■□□□□ 0.83
ATG4B-225ENST00000494465 MYH14Q7Z406 1995 aaKnown RBP20.2■□□□□ 0.82
ATG4B-225ENST00000494465 KCNQ2O43526 872 aa20.2■□□□□ 0.82
ATG4B-225ENST00000494465 IL6STP40189 918 aaPredicted RBP20.2■□□□□ 0.82
ATG4B-225ENST00000494465 ANTXR1Q9H6X2 564 aa20.2■□□□□ 0.82
ATG4B-225ENST00000494465 TLR7Q9NYK1 1049 aaKnown RBP20.2■□□□□ 0.82
ATG4B-225ENST00000494465 NBR1Q14596 966 aa20.19■□□□□ 0.82
ATG4B-225ENST00000494465 INTS5Q6P9B9 1019 aaKnown RBP20.19■□□□□ 0.82
ATG4B-225ENST00000494465 CCDC8Q9H0W5 538 aaPredicted RBP20.19■□□□□ 0.82
ATG4B-225ENST00000494465 THSD7AQ9UPZ6 1657 aa20.19■□□□□ 0.82
ATG4B-225ENST00000494465 LOC102724428A0A0B4J2F2 783 aa20.19■□□□□ 0.82
ATG4B-225ENST00000494465 A0A0G2JS52 829 aa20.19■□□□□ 0.82
ATG4B-225ENST00000494465 SIK1P57059 783 aa20.19■□□□□ 0.82
ATG4B-225ENST00000494465 IL25Q9H293 177 aa20.19■□□□□ 0.82
ATG4B-225ENST00000494465 PALLDQ8WX93 1383 aa20.18■□□□□ 0.82
ATG4B-225ENST00000494465 CNTROBQ8N137 903 aa20.18■□□□□ 0.82
ATG4B-225ENST00000494465 GPATCH3Q96I76 525 aa20.18■□□□□ 0.82
ATG4B-225ENST00000494465 CD2BP2O95400 341 aaKnown RBP20.17■□□□□ 0.82
ATG4B-225ENST00000494465 PCCAP05165 728 aaPredicted RBP20.17■□□□□ 0.82
ATG4B-225ENST00000494465 ITPK1Q13572 414 aa20.17■□□□□ 0.82
ATG4B-225ENST00000494465 USP21Q9UK80 565 aa20.17■□□□□ 0.82
ATG4B-225ENST00000494465 COL5A3P25940 1745 aaPredicted RBP20.17■□□□□ 0.82
ATG4B-225ENST00000494465 ZNF831Q5JPB2 1677 aa20.17■□□□□ 0.82
ATG4B-225ENST00000494465 ATP6V1AP38606 617 aa20.17■□□□□ 0.82
ATG4B-225ENST00000494465 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
ATG4B-225ENST00000494465 TFCP2Q12800 502 aa20.17■□□□□ 0.82
ATG4B-225ENST00000494465 HSCBQ8IWL3 235 aa20.17■□□□□ 0.82
ATG4B-225ENST00000494465 ARXQ96QS3 562 aa20.17■□□□□ 0.82
ATG4B-225ENST00000494465 NLRP10Q86W26 655 aa20.16■□□□□ 0.82
ATG4B-225ENST00000494465 ERVV-1B6SEH8 477 aa20.16■□□□□ 0.82
ATG4B-225ENST00000494465 ATG9AQ7Z3C6 839 aa20.16■□□□□ 0.82
ATG4B-225ENST00000494465 ZBTB38Q8NAP3 1195 aaPredicted RBP20.16■□□□□ 0.82
ATG4B-225ENST00000494465 PLA2G12BQ9BX93 195 aa20.16■□□□□ 0.82
ATG4B-225ENST00000494465 CHMP3Q9Y3E7 222 aa20.16■□□□□ 0.82
ATG4B-225ENST00000494465 CRKLP46109 303 aaKnown RBP20.15■□□□□ 0.82
ATG4B-225ENST00000494465 TNNI3KQ59H18 835 aa20.15■□□□□ 0.82
ATG4B-225ENST00000494465 DZIP3Q86Y13 1208 aaKnown RBP20.15■□□□□ 0.82
ATG4B-225ENST00000494465 FAM89AQ96GI7 184 aa20.15■□□□□ 0.82
ATG4B-225ENST00000494465 SLKQ9H2G2 1235 aaPredicted RBP20.15■□□□□ 0.82
ATG4B-225ENST00000494465 CCDC87Q9NVE4 849 aa20.15■□□□□ 0.82
ATG4B-225ENST00000494465 FPGT-TNNI3KV9GXZ4 949 aa20.15■□□□□ 0.82
ATG4B-225ENST00000494465 HSP90AB3PQ58FF7 597 aa20.15■□□□□ 0.82
ATG4B-225ENST00000494465 TBC1D2BQ9UPU7 963 aa20.15■□□□□ 0.82
ATG4B-225ENST00000494465 GPTP24298 496 aa20.14■□□□□ 0.82
ATG4B-225ENST00000494465 DBNLQ9UJU6 430 aaKnown RBP20.14■□□□□ 0.82
ATG4B-225ENST00000494465 RABEP1Q15276 862 aa20.14■□□□□ 0.81
ATG4B-225ENST00000494465 MYH3P11055 1940 aa20.14■□□□□ 0.81
ATG4B-225ENST00000494465 HSPA1LP34931 641 aa20.13■□□□□ 0.81
ATG4B-225ENST00000494465 SYNE4Q8N205 404 aa20.13■□□□□ 0.81
ATG4B-225ENST00000494465 SMARCC1Q92922 1105 aaPredicted RBP20.13■□□□□ 0.81
ATG4B-225ENST00000494465 CDHR2Q9BYE9 1310 aa20.13■□□□□ 0.81
ATG4B-225ENST00000494465 SGSM2O43147 1006 aa20.13■□□□□ 0.81
ATG4B-225ENST00000494465 CSF1RP07333 972 aa20.12■□□□□ 0.81
ATG4B-225ENST00000494465 ZNF594Q96JF6 807 aaPredicted RBP20.12■□□□□ 0.81
ATG4B-225ENST00000494465 ANO2Q9NQ90 1003 aa20.12■□□□□ 0.81
ATG4B-225ENST00000494465 UBN2Q6ZU65 1347 aa20.12■□□□□ 0.81
ATG4B-225ENST00000494465 SPRYD3Q8NCJ5 442 aa20.12■□□□□ 0.81
ATG4B-225ENST00000494465 EVI5LQ96CN4 794 aa20.12■□□□□ 0.81
ATG4B-225ENST00000494465 LRRC24Q50LG9 513 aa20.11■□□□□ 0.81
ATG4B-225ENST00000494465 ZNF34Q8IZ26 560 aa20.11■□□□□ 0.81
ATG4B-225ENST00000494465 EYA2O00167 538 aa20.1■□□□□ 0.81
ATG4B-225ENST00000494465 EPB41L2O43491 1005 aaKnown RBP20.1■□□□□ 0.81
ATG4B-225ENST00000494465 PTF1AQ7RTS3 328 aa20.1■□□□□ 0.81
ATG4B-225ENST00000494465 CIAO1O76071 339 aa20.1■□□□□ 0.81
ATG4B-225ENST00000494465 IL15P40933 162 aaPredicted RBP20.1■□□□□ 0.81
ATG4B-225ENST00000494465 BOLA2Q9H3K6 86 aa20.1■□□□□ 0.81
ATG4B-225ENST00000494465 BTAF1O14981 1849 aa20.1■□□□□ 0.81
ATG4B-225ENST00000494465 NHSQ6T4R5 1651 aa20.09■□□□□ 0.81
ATG4B-225ENST00000494465 K7ELQ4 463 aaPredicted RBP20.09■□□□□ 0.81
ATG4B-225ENST00000494465 ATP5JP18859 108 aa20.09■□□□□ 0.81
ATG4B-225ENST00000494465 NFKBIBQ15653 356 aa20.09■□□□□ 0.81
ATG4B-225ENST00000494465 IL17RAQ96F46 866 aa20.09■□□□□ 0.81
ATG4B-225ENST00000494465 DBNDD2Q9BQY9 259 aa20.09■□□□□ 0.81
ATG4B-225ENST00000494465 PUS3Q9BZE2 481 aaKnown RBP20.09■□□□□ 0.81
ATG4B-225ENST00000494465 GPR108Q9NPR9 543 aa20.09■□□□□ 0.81
ATG4B-225ENST00000494465 PALD1Q9ULE6 856 aa20.09■□□□□ 0.81
ATG4B-225ENST00000494465 CWC27Q6UX04 472 aaKnown RBP20.08■□□□□ 0.81
ATG4B-225ENST00000494465 CAMTA2O94983 1202 aa20.08■□□□□ 0.8
ATG4B-225ENST00000494465 DDIT3P35638 169 aa20.08■□□□□ 0.8
ATG4B-225ENST00000494465 CCDC57Q2TAC2 916 aa20.08■□□□□ 0.8
ATG4B-225ENST00000494465 BCORQ6W2J9 1755 aa20.08■□□□□ 0.8
ATG4B-225ENST00000494465 AEBP2Q6ZN18 517 aaPredicted RBP20.07■□□□□ 0.8
ATG4B-225ENST00000494465 LSG1Q9H089 658 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms