RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 KCNQ4P56696 695 aa10.66□□□□□ -0.7
MSL3-217ENST00000494268 FKBP4Q02790 459 aaKnown RBP eCLIP10.66□□□□□ -0.7
MSL3-217ENST00000494268 SLC30A3Q99726 388 aa10.66□□□□□ -0.7
MSL3-217ENST00000494268 WIPF1O43516 503 aa10.65□□□□□ -0.7
MSL3-217ENST00000494268 ADAMTS2O95450 1211 aa10.65□□□□□ -0.7
MSL3-217ENST00000494268 ZAP70P43403 619 aa10.65□□□□□ -0.7
MSL3-217ENST00000494268 ARSDP51689 593 aa10.65□□□□□ -0.7
MSL3-217ENST00000494268 SRSF11Q05519 484 aaKnown RBP10.65□□□□□ -0.7
MSL3-217ENST00000494268 RGL4Q8IZJ4 473 aa10.65□□□□□ -0.7
MSL3-217ENST00000494268 CCER1Q8TC90 406 aaPredicted RBP10.65□□□□□ -0.7
MSL3-217ENST00000494268 RTCBQ9Y3I0 505 aaKnown RBP10.65□□□□□ -0.7
MSL3-217ENST00000494268 ICMTO60725 284 aa10.64□□□□□ -0.71
MSL3-217ENST00000494268 FAM182BQ5T319 152 aa10.64□□□□□ -0.71
MSL3-217ENST00000494268 AEBP1Q8IUX7 1158 aa10.64□□□□□ -0.71
MSL3-217ENST00000494268 HOMEZQ8IX15 550 aa10.64□□□□□ -0.71
MSL3-217ENST00000494268 GNEQ9Y223 722 aaKnown RBP10.64□□□□□ -0.71
MSL3-217ENST00000494268 SF3B2Q13435 895 aaKnown RBP10.63□□□□□ -0.71
MSL3-217ENST00000494268 ECM1Q16610 540 aa10.63□□□□□ -0.71
MSL3-217ENST00000494268 NOM1Q5C9Z4 860 aaKnown RBP10.63□□□□□ -0.71
MSL3-217ENST00000494268 RAB44Q7Z6P3 723 aaPredicted RBP10.63□□□□□ -0.71
MSL3-217ENST00000494268 CMTR1Q8N1G2 835 aaKnown RBP10.63□□□□□ -0.71
MSL3-217ENST00000494268 ABTB2Q8N961 1025 aa10.63□□□□□ -0.71
MSL3-217ENST00000494268 EGFL7Q9UHF1 273 aa10.63□□□□□ -0.71
MSL3-217ENST00000494268 SLURP2P0DP57 97 aa10.62□□□□□ -0.71
MSL3-217ENST00000494268 NPR3P17342 541 aa10.62□□□□□ -0.71
MSL3-217ENST00000494268 EIF1AXP47813 144 aaKnown RBP10.62□□□□□ -0.71
MSL3-217ENST00000494268 KCNA1Q09470 495 aa10.62□□□□□ -0.71
MSL3-217ENST00000494268 SPEM2Q0P670 501 aa10.62□□□□□ -0.71
MSL3-217ENST00000494268 GPR152Q8TDT2 470 aa10.62□□□□□ -0.71
MSL3-217ENST00000494268 WHAMMQ8TF30 809 aa10.62□□□□□ -0.71
MSL3-217ENST00000494268 PRR12Q9ULL5 1215 aa10.62□□□□□ -0.71
MSL3-217ENST00000494268 NSFL1CQ9UNZ2 370 aaKnown RBP10.62□□□□□ -0.71
MSL3-217ENST00000494268 IVNS1ABPQ9Y6Y0 642 aa10.62□□□□□ -0.71
MSL3-217ENST00000494268 H3BRB1 525 aa10.61□□□□□ -0.71
MSL3-217ENST00000494268 GSX2Q9BZM3 304 aa10.61□□□□□ -0.71
MSL3-217ENST00000494268 TUT1Q9H6E5 874 aaKnown RBP10.61□□□□□ -0.71
MSL3-217ENST00000494268 KLF15Q9UIH9 416 aa10.61□□□□□ -0.71
MSL3-217ENST00000494268 FAM13AO94988 1023 aa10.6□□□□□ -0.71
MSL3-217ENST00000494268 LORP23490 312 aaPredicted RBP10.6□□□□□ -0.71
MSL3-217ENST00000494268 MAP2K3P46734 347 aa10.6□□□□□ -0.71
MSL3-217ENST00000494268 PCBP4P57723 403 aaKnown RBP10.6□□□□□ -0.71
MSL3-217ENST00000494268 ACDQ96AP0 544 aa10.6□□□□□ -0.71
MSL3-217ENST00000494268 KCNMB2Q9Y691 235 aa10.6□□□□□ -0.71
MSL3-217ENST00000494268 EPB42P16452 691 aa10.59□□□□□ -0.71
MSL3-217ENST00000494268 AAMPQ13685 434 aa10.59□□□□□ -0.71
MSL3-217ENST00000494268 LYPD4Q6UWN0 246 aa10.59□□□□□ -0.71
MSL3-217ENST00000494268 GLYCTKQ8IVS8 523 aa10.59□□□□□ -0.71
MSL3-217ENST00000494268 SOWAHDA6NJG2 315 aa10.58□□□□□ -0.72
MSL3-217ENST00000494268 DNM1Q05193 864 aaKnown RBP10.58□□□□□ -0.72
MSL3-217ENST00000494268 CCINQ13939 588 aa10.58□□□□□ -0.72
MSL3-217ENST00000494268 KRT25Q7Z3Z0 450 aa10.58□□□□□ -0.72
MSL3-217ENST00000494268 SYT9Q86SS6 491 aa10.58□□□□□ -0.72
MSL3-217ENST00000494268 PIK3R5Q8WYR1 880 aa10.58□□□□□ -0.72
MSL3-217ENST00000494268 EDEM1Q92611 657 aa10.58□□□□□ -0.72
MSL3-217ENST00000494268 BHMTQ93088 406 aa10.58□□□□□ -0.72
MSL3-217ENST00000494268 OXCT2Q9BYC2 517 aaPredicted RBP10.58□□□□□ -0.72
MSL3-217ENST00000494268 GGA1Q9UJY5 639 aa10.58□□□□□ -0.72
MSL3-217ENST00000494268 NEURL1BA8MQ27 555 aa10.57□□□□□ -0.72
MSL3-217ENST00000494268 SASH3O75995 380 aa10.57□□□□□ -0.72
MSL3-217ENST00000494268 TARSP26639 723 aaKnown RBP10.57□□□□□ -0.72
MSL3-217ENST00000494268 TRIP4Q15650 581 aaPredicted RBP10.57□□□□□ -0.72
MSL3-217ENST00000494268 ZNF468Q5VIY5 522 aaPredicted RBP10.57□□□□□ -0.72
MSL3-217ENST00000494268 C1orf229Q6ZS94 237 aaPredicted RBP10.57□□□□□ -0.72
MSL3-217ENST00000494268 NUDT16Q96DE0 195 aaKnown RBP10.57□□□□□ -0.72
MSL3-217ENST00000494268 CCDC87Q9NVE4 849 aa10.57□□□□□ -0.72
MSL3-217ENST00000494268 XYLBO75191 536 aa10.56□□□□□ -0.72
MSL3-217ENST00000494268 ARAFP10398 606 aa10.56□□□□□ -0.72
MSL3-217ENST00000494268 ARHGAP4P98171 946 aa10.56□□□□□ -0.72
MSL3-217ENST00000494268 ALKBH2Q6NS38 261 aa10.56□□□□□ -0.72
MSL3-217ENST00000494268 FAM13BQ9NYF5 915 aa10.56□□□□□ -0.72
MSL3-217ENST00000494268 ZFATQ9P243 1243 aa10.56□□□□□ -0.72
MSL3-217ENST00000494268 FZD6O60353 706 aa10.55□□□□□ -0.72
MSL3-217ENST00000494268 CELA2BP08218 269 aaPredicted RBP10.55□□□□□ -0.72
MSL3-217ENST00000494268 ZNF385CQ66K41 422 aaPredicted RBP10.55□□□□□ -0.72
MSL3-217ENST00000494268 KCTD17Q8N5Z5 321 aa10.55□□□□□ -0.72
MSL3-217ENST00000494268 POLIQ9UNA4 740 aa10.55□□□□□ -0.72
MSL3-217ENST00000494268 EGFRP00533 1210 aa10.54□□□□□ -0.72
MSL3-217ENST00000494268 PDGFAP04085 211 aa10.54□□□□□ -0.72
MSL3-217ENST00000494268 NFKB1P19838 968 aa10.54□□□□□ -0.72
MSL3-217ENST00000494268 FCHSD1Q86WN1 690 aa10.54□□□□□ -0.72
MSL3-217ENST00000494268 ZSCAN1Q8NBB4 408 aa10.54□□□□□ -0.72
MSL3-217ENST00000494268 PNMA5Q96PV4 448 aa10.54□□□□□ -0.72
MSL3-217ENST00000494268 GGNBP2Q9H3C7 697 aa10.54□□□□□ -0.72
MSL3-217ENST00000494268 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.54□□□□□ -0.72
MSL3-217ENST00000494268 UBAP1LF5GYI3 381 aa10.53□□□□□ -0.72
MSL3-217ENST00000494268 ADH6P28332 368 aa10.53□□□□□ -0.72
MSL3-217ENST00000494268 MZF1P28698 734 aaPredicted RBP10.53□□□□□ -0.72
MSL3-217ENST00000494268 C11orf16Q9NQ32 467 aa10.53□□□□□ -0.72
MSL3-217ENST00000494268 AVENQ9NQS1 362 aaPredicted RBP10.53□□□□□ -0.72
MSL3-217ENST00000494268 A6NHS1 94 aa10.52□□□□□ -0.73
MSL3-217ENST00000494268 BCRP11274 1271 aa10.52□□□□□ -0.73
MSL3-217ENST00000494268 GOLGA6L1Q8N7Z2 621 aa10.52□□□□□ -0.73
MSL3-217ENST00000494268 GALNT6Q8NCL4 622 aa10.52□□□□□ -0.73
MSL3-217ENST00000494268 IGFLR1Q9H665 355 aa10.52□□□□□ -0.73
MSL3-217ENST00000494268 BIN2Q9UBW5 565 aaPredicted RBP10.52□□□□□ -0.73
MSL3-217ENST00000494268 GDF2Q9UK05 429 aaPredicted RBP10.52□□□□□ -0.73
MSL3-217ENST00000494268 SIN3BO75182 1162 aa10.51□□□□□ -0.73
MSL3-217ENST00000494268 INSM1Q01101 510 aaPredicted RBP10.51□□□□□ -0.73
MSL3-217ENST00000494268 NEUROD1Q13562 356 aa10.51□□□□□ -0.73
MSL3-217ENST00000494268 SVOPQ8N4V2 548 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms