RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 CHAF1AQ13111 956 aaPredicted RBP7.55□□□□□ -1.2
NF1-215ENST00000493220 RAD21O60216 631 aa7.55□□□□□ -1.2
NF1-215ENST00000493220 GIGYF1O75420 1035 aaPredicted RBP7.55□□□□□ -1.2
NF1-215ENST00000493220 TRIM29Q14134 588 aa7.55□□□□□ -1.2
NF1-215ENST00000493220 KDRP35968 1356 aa7.55□□□□□ -1.2
NF1-215ENST00000493220 HEG1Q9ULI3 1381 aa7.55□□□□□ -1.2
NF1-215ENST00000493220 ANXA1P04083 346 aa7.54□□□□□ -1.2
NF1-215ENST00000493220 DNTTIP2Q5QJE6 756 aaKnown RBP7.54□□□□□ -1.2
NF1-215ENST00000493220 ADRA2BP18089 450 aa7.54□□□□□ -1.2
NF1-215ENST00000493220 CCDC125Q86Z20 511 aa7.54□□□□□ -1.2
NF1-215ENST00000493220 JDP2Q8WYK2 163 aa7.54□□□□□ -1.2
NF1-215ENST00000493220 BCCIPQ9P287 314 aaKnown RBP eCLIP7.54□□□□□ -1.22e-7■■■■■ 30.3
NF1-215ENST00000493220 AXIN2Q9Y2T1 843 aa7.54□□□□□ -1.2
NF1-215ENST00000493220 ZNF219Q9P2Y4 722 aaPredicted RBP7.54□□□□□ -1.2
NF1-215ENST00000493220 PLEKHG2Q9H7P9 1386 aa7.54□□□□□ -1.2
NF1-215ENST00000493220 MX1P20591 662 aa7.54□□□□□ -1.2
NF1-215ENST00000493220 AIDAQ96BJ3 306 aa7.54□□□□□ -1.2
NF1-215ENST00000493220 MAP3K15Q6ZN16 1313 aa7.54□□□□□ -1.2
NF1-215ENST00000493220 FAM184AQ8NB25 1140 aa7.54□□□□□ -1.2
NF1-215ENST00000493220 WDHD1O75717 1129 aaPredicted RBP7.53□□□□□ -1.2
NF1-215ENST00000493220 DHX16O60231 1041 aaKnown RBP7.53□□□□□ -1.2
NF1-215ENST00000493220 BAG3O95817 575 aa7.53□□□□□ -1.2
NF1-215ENST00000493220 A1BGP04217 495 aa7.53□□□□□ -1.2
NF1-215ENST00000493220 ATP8B2P98198 1209 aa7.53□□□□□ -1.2
NF1-215ENST00000493220 C16orf71Q8IYS4 520 aaPredicted RBP7.53□□□□□ -1.2
NF1-215ENST00000493220 XRN1Q8IZH2 1706 aaKnown RBP7.53□□□□□ -1.2
NF1-215ENST00000493220 CPLX1O14810 134 aa7.53□□□□□ -1.2
NF1-215ENST00000493220 TSPYL6Q8N831 410 aa7.53□□□□□ -1.2
NF1-215ENST00000493220 PHLPP1O60346 1717 aa7.53□□□□□ -1.2
NF1-215ENST00000493220 ERVV-1B6SEH8 477 aa7.53□□□□□ -1.2
NF1-215ENST00000493220 MARCH6O60337 910 aa7.53□□□□□ -1.2
NF1-215ENST00000493220 PIP4K2AP48426 406 aaPredicted RBP7.53□□□□□ -1.2
NF1-215ENST00000493220 TCIRG1Q13488 830 aa7.53□□□□□ -1.2
NF1-215ENST00000493220 TMC4Q7Z404 712 aa7.53□□□□□ -1.2
NF1-215ENST00000493220 PIGBQ92521 554 aa7.53□□□□□ -1.2
NF1-215ENST00000493220 CLSTN1O94985 981 aa7.52□□□□□ -1.2
NF1-215ENST00000493220 USP5P45974 858 aa7.52□□□□□ -1.2
NF1-215ENST00000493220 ZSCAN29Q8IWY8 852 aaPredicted RBP7.52□□□□□ -1.2
NF1-215ENST00000493220 IDH1O75874 414 aaKnown RBP7.52□□□□□ -1.21
NF1-215ENST00000493220 LMOD1P29536 600 aaPredicted RBP7.52□□□□□ -1.21
NF1-215ENST00000493220 LMBR1LQ6UX01 489 aa7.52□□□□□ -1.21
NF1-215ENST00000493220 ASAP1Q9ULH1 1129 aa7.52□□□□□ -1.21
NF1-215ENST00000493220 CD163L1Q9NR16 1453 aa7.52□□□□□ -1.21
NF1-215ENST00000493220 H3BQV1 296 aa7.52□□□□□ -1.21
NF1-215ENST00000493220 XBP1P17861 261 aa7.52□□□□□ -1.21
NF1-215ENST00000493220 TDO2P48775 406 aa7.52□□□□□ -1.21
NF1-215ENST00000493220 IFFO2Q5TF58 517 aa7.52□□□□□ -1.21
NF1-215ENST00000493220 PHAXQ9H814 394 aaKnown RBP7.52□□□□□ -1.21
NF1-215ENST00000493220 ABCF2Q9UG63 623 aa7.52□□□□□ -1.21
NF1-215ENST00000493220 TCEAL9Q9UHQ7 104 aa7.52□□□□□ -1.21
NF1-215ENST00000493220 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.52□□□□□ -1.21
NF1-215ENST00000493220 ZC3H12CQ9C0D7 883 aaKnown RBP7.52□□□□□ -1.21
NF1-215ENST00000493220 BRMS1Q9HCU9 246 aa7.52□□□□□ -1.21
NF1-215ENST00000493220 IL1RAPL2Q9NP60 686 aa7.52□□□□□ -1.21
NF1-215ENST00000493220 EXOC6BQ9Y2D4 811 aa7.52□□□□□ -1.21
NF1-215ENST00000493220 NRKQ7Z2Y5 1582 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 ATP2B3Q16720 1220 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 NUTM1Q86Y26 1132 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 CNKSR2Q8WXI2 1034 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 EVI5LQ96CN4 794 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 KRT32Q14532 448 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 PPP4R3BQ5MIZ7 849 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 VPS53Q5VIR6 699 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 CNKSR1Q969H4 720 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 GBP4Q96PP9 640 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 MROH5Q6ZUA9 1318 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 RPS6KA4O75676 772 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 GGA1Q9UJY5 639 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 CYP27B1O15528 508 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 HDAC1Q13547 482 aaPredicted RBP7.51□□□□□ -1.21
NF1-215ENST00000493220 CCAR1Q8IX12 1150 aaKnown RBP7.51□□□□□ -1.21
NF1-215ENST00000493220 OGFOD1Q8N543 542 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 SPINK5Q9NQ38 1064 aaPredicted RBP7.51□□□□□ -1.21
NF1-215ENST00000493220 MAST3O60307 1309 aa7.51□□□□□ -1.21
NF1-215ENST00000493220 POLR3DP05423 398 aaPredicted RBP7.5□□□□□ -1.21
NF1-215ENST00000493220 ANKRD1Q15327 319 aa7.5□□□□□ -1.21
NF1-215ENST00000493220 IMMTQ16891 758 aaKnown RBP7.5□□□□□ -1.21
NF1-215ENST00000493220 CRACR2BQ8N4Y2 399 aaPredicted RBP7.5□□□□□ -1.21
NF1-215ENST00000493220 ECHDC1Q9NTX5 307 aa7.5□□□□□ -1.21
NF1-215ENST00000493220 ATP6V1DQ9Y5K8 247 aa7.5□□□□□ -1.21
NF1-215ENST00000493220 RNF123Q5XPI4 1314 aa7.5□□□□□ -1.21
NF1-215ENST00000493220 SSFA2P28290 1259 aa7.5□□□□□ -1.21
NF1-215ENST00000493220 ANKRD44Q8N8A2 993 aa7.5□□□□□ -1.21
NF1-215ENST00000493220 ZFYP08048 801 aaPredicted RBP7.5□□□□□ -1.21
NF1-215ENST00000493220 EIF6P56537 245 aaKnown RBP7.5□□□□□ -1.21
NF1-215ENST00000493220 IKQ13123 557 aaPredicted RBP7.5□□□□□ -1.21
NF1-215ENST00000493220 KRT24Q2M2I5 525 aa7.5□□□□□ -1.21
NF1-215ENST00000493220 CWF19L2Q2TBE0 894 aaKnown RBP7.5□□□□□ -1.21
NF1-215ENST00000493220 SAMD1Q6SPF0 538 aaPredicted RBP7.5□□□□□ -1.21
NF1-215ENST00000493220 CERS3Q8IU89 383 aa7.5□□□□□ -1.21
NF1-215ENST00000493220 HLA-DOAP06340 250 aa7.5□□□□□ -1.21
NF1-215ENST00000493220 ITGA6P23229 1130 aa7.5□□□□□ -1.21
NF1-215ENST00000493220 PDE4AP27815 886 aa7.5□□□□□ -1.21
NF1-215ENST00000493220 USPL1Q5W0Q7 1092 aa7.5□□□□□ -1.21
NF1-215ENST00000493220 C2CD5Q86YS7 1000 aa7.5□□□□□ -1.21
NF1-215ENST00000493220 ZBTB38Q8NAP3 1195 aaPredicted RBP7.5□□□□□ -1.21
NF1-215ENST00000493220 PCCAP05165 728 aaPredicted RBP7.49□□□□□ -1.21
NF1-215ENST00000493220 PLCG2P16885 1265 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 GRIPAP1Q4V328 841 aa7.49□□□□□ -1.21
NF1-215ENST00000493220 CLEC4GQ6UXB4 293 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms