RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 IGKV5-2P06315 115 aa10.02□□□□□ -0.81
FDPS-218ENST00000492887 NBPF7P0C2Y1 421 aaPredicted RBP10.02□□□□□ -0.81
FDPS-218ENST00000492887 RGS3P49796 1198 aa10.02□□□□□ -0.81
FDPS-218ENST00000492887 HDAC1Q13547 482 aaPredicted RBP10.02□□□□□ -0.81
FDPS-218ENST00000492887 RTL5Q5HYW3 569 aaPredicted RBP10.02□□□□□ -0.81
FDPS-218ENST00000492887 SLC27A3Q5K4L6 730 aa10.02□□□□□ -0.81
FDPS-218ENST00000492887 UBE3BQ7Z3V4 1068 aa10.02□□□□□ -0.81
FDPS-218ENST00000492887 RPAP2Q8IXW5 612 aaPredicted RBP10.02□□□□□ -0.81
FDPS-218ENST00000492887 ANKRD44Q8N8A2 993 aa10.02□□□□□ -0.81
FDPS-218ENST00000492887 JARID2Q92833 1246 aaPredicted RBP10.02□□□□□ -0.81
FDPS-218ENST00000492887 USP44Q9H0E7 712 aa10.02□□□□□ -0.81
FDPS-218ENST00000492887 FAM177BA6PVY3 158 aa10.01□□□□□ -0.81
FDPS-218ENST00000492887 NPHP1O15259 732 aa10.01□□□□□ -0.81
FDPS-218ENST00000492887 ZPR1O75312 459 aa10.01□□□□□ -0.81
FDPS-218ENST00000492887 HMGB2P26583 209 aaKnown RBP10.01□□□□□ -0.81
FDPS-218ENST00000492887 EIF5P55010 431 aaKnown RBP10.01□□□□□ -0.81
FDPS-218ENST00000492887 OS9Q13438 667 aaPredicted RBP10.01□□□□□ -0.81
FDPS-218ENST00000492887 TCIRG1Q13488 830 aa10.01□□□□□ -0.81
FDPS-218ENST00000492887 GCKRQ14397 625 aa10.01□□□□□ -0.81
FDPS-218ENST00000492887 GIGYF2Q6Y7W6 1299 aaKnown RBP10.01□□□□□ -0.81
FDPS-218ENST00000492887 GCC1Q96CN9 775 aa10.01□□□□□ -0.81
FDPS-218ENST00000492887 SRGAP3O43295 1099 aa10□□□□□ -0.81
FDPS-218ENST00000492887 HLFQ16534 295 aa10□□□□□ -0.81
FDPS-218ENST00000492887 TXNRD1Q16881 649 aa10□□□□□ -0.81
FDPS-218ENST00000492887 RC3H1Q5TC82 1133 aaKnown RBP10□□□□□ -0.81
FDPS-218ENST00000492887 CCDC191Q8NCU4 936 aa10□□□□□ -0.81
FDPS-218ENST00000492887 SUCLG2Q96I99 432 aa10□□□□□ -0.81
FDPS-218ENST00000492887 PDZRN3Q9UPQ7 1066 aa10□□□□□ -0.81
FDPS-218ENST00000492887 TAF1P21675 1872 aa10□□□□□ -0.81
FDPS-218ENST00000492887 MYH13Q9UKX3 1938 aa9.99□□□□□ -0.81
FDPS-218ENST00000492887 ERVV-1B6SEH8 477 aa9.99□□□□□ -0.81
FDPS-218ENST00000492887 RPS6KA4O75676 772 aa9.99□□□□□ -0.81
FDPS-218ENST00000492887 RFC4P35249 363 aa9.99□□□□□ -0.81
FDPS-218ENST00000492887 ATP8B2P98198 1209 aa9.99□□□□□ -0.81
FDPS-218ENST00000492887 ANKRD45Q5TZF3 282 aa9.99□□□□□ -0.81
FDPS-218ENST00000492887 BICDL1Q6ZP65 573 aa9.99□□□□□ -0.81
FDPS-218ENST00000492887 PPP1R42Q7Z4L9 355 aa9.99□□□□□ -0.81
FDPS-218ENST00000492887 PIP4P2Q8N4L2 257 aa9.99□□□□□ -0.81
FDPS-218ENST00000492887 FOXD4L1Q9NU39 408 aa9.99□□□□□ -0.81
FDPS-218ENST00000492887 NIP7Q9Y221 180 aaKnown RBP eCLIP9.99□□□□□ -0.81
FDPS-218ENST00000492887 PNMA6EA0A0J9YXQ4 647 aa9.98□□□□□ -0.81
FDPS-218ENST00000492887 HAX1O00165 279 aa9.98□□□□□ -0.81
FDPS-218ENST00000492887 CAMTA2O94983 1202 aa9.98□□□□□ -0.81
FDPS-218ENST00000492887 BAG6P46379 1132 aa9.98□□□□□ -0.81
FDPS-218ENST00000492887 TRAPPC3LQ5T215 181 aa9.98□□□□□ -0.81
FDPS-218ENST00000492887 USPL1Q5W0Q7 1092 aa9.98□□□□□ -0.81
FDPS-218ENST00000492887 SMIM5Q71RC9 77 aa9.98□□□□□ -0.81
FDPS-218ENST00000492887 SKAP1Q86WV1 359 aa9.98□□□□□ -0.81
FDPS-218ENST00000492887 ISCA1Q9BUE6 129 aa9.98□□□□□ -0.81
FDPS-218ENST00000492887 LNPKQ9C0E8 428 aa9.98□□□□□ -0.81
FDPS-218ENST00000492887 BICC1Q9H694 974 aaKnown RBP9.98□□□□□ -0.81
FDPS-218ENST00000492887 TRMT112Q9UI30 125 aaKnown RBP9.98□□□□□ -0.81
FDPS-218ENST00000492887 EXOC6BQ9Y2D4 811 aa9.98□□□□□ -0.81
FDPS-218ENST00000492887 A0A1B0GUL6 1792 aa9.98□□□□□ -0.81
FDPS-218ENST00000492887 GTF2E1P29083 439 aaPredicted RBP9.97□□□□□ -0.81
FDPS-218ENST00000492887 PARP10Q53GL7 1025 aa9.97□□□□□ -0.81
FDPS-218ENST00000492887 TAF7LQ5H9L4 462 aa9.97□□□□□ -0.81
FDPS-218ENST00000492887 NLRP10Q86W26 655 aa9.97□□□□□ -0.81
FDPS-218ENST00000492887 LRRC4BQ9NT99 713 aa9.97□□□□□ -0.81
FDPS-218ENST00000492887 SRP68Q9UHB9 627 aaKnown RBP9.97□□□□□ -0.81
FDPS-218ENST00000492887 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.96□□□□□ -0.82
FDPS-218ENST00000492887 PLSCR1O15162 318 aa9.96□□□□□ -0.82
FDPS-218ENST00000492887 SURF6O75683 361 aaKnown RBP9.96□□□□□ -0.82
FDPS-218ENST00000492887 PCCAP05165 728 aaPredicted RBP9.96□□□□□ -0.82
FDPS-218ENST00000492887 EN1Q05925 392 aaPredicted RBP9.96□□□□□ -0.82
FDPS-218ENST00000492887 SIRT2Q8IXJ6 389 aa9.96□□□□□ -0.82
FDPS-218ENST00000492887 SMC5Q8IY18 1101 aa9.96□□□□□ -0.82
FDPS-218ENST00000492887 FAM89AQ96GI7 184 aa9.96□□□□□ -0.82
FDPS-218ENST00000492887 CCDC85AQ96PX6 553 aaPredicted RBP9.96□□□□□ -0.82
FDPS-218ENST00000492887 UTP14AQ9BVJ6 771 aaKnown RBP9.96□□□□□ -0.82
FDPS-218ENST00000492887 TFCP2L1Q9NZI6 479 aa9.96□□□□□ -0.82
FDPS-218ENST00000492887 NARFQ9UHQ1 456 aa9.96□□□□□ -0.82
FDPS-218ENST00000492887 UTYO14607 1347 aa9.96□□□□□ -0.82
FDPS-218ENST00000492887 IBTKQ9P2D0 1353 aaPredicted RBP9.96□□□□□ -0.82
FDPS-218ENST00000492887 H7C1W4 665 aa9.95□□□□□ -0.82
FDPS-218ENST00000492887 IRS4O14654 1257 aaPredicted RBP9.95□□□□□ -0.82
FDPS-218ENST00000492887 SSFA2P28290 1259 aa9.95□□□□□ -0.82
FDPS-218ENST00000492887 G3BP1Q13283 466 aaKnown RBP eCLIP9.95□□□□□ -0.824e-8■□□□□ 9
FDPS-218ENST00000492887 HSP90AB4PQ58FF6 505 aa9.95□□□□□ -0.82
FDPS-218ENST00000492887 CHD1LQ86WJ1 897 aa9.95□□□□□ -0.82
FDPS-218ENST00000492887 ZBTB38Q8NAP3 1195 aaPredicted RBP9.95□□□□□ -0.82
FDPS-218ENST00000492887 ARHGEF1Q92888 912 aaKnown RBP9.95□□□□□ -0.82
FDPS-218ENST00000492887 SIL1Q9H173 461 aa9.95□□□□□ -0.82
FDPS-218ENST00000492887 DCTPP1Q9H773 170 aa9.95□□□□□ -0.82
FDPS-218ENST00000492887 UBN2Q6ZU65 1347 aa9.95□□□□□ -0.82
FDPS-218ENST00000492887 SH3TC1Q8TE82 1336 aa9.95□□□□□ -0.82
FDPS-218ENST00000492887 USP42Q9H9J4 1324 aaKnown RBP9.95□□□□□ -0.82
FDPS-218ENST00000492887 TNRC6CQ9HCJ0 1690 aaKnown RBP9.95□□□□□ -0.82
FDPS-218ENST00000492887 MYH7P12883 1935 aa9.95□□□□□ -0.82
FDPS-218ENST00000492887 CDHR2Q9BYE9 1310 aa9.94□□□□□ -0.82
FDPS-218ENST00000492887 SMARCA5O60264 1052 aaPredicted RBP9.94□□□□□ -0.82
FDPS-218ENST00000492887 HSP90B1P14625 803 aaKnown RBP9.94□□□□□ -0.82
FDPS-218ENST00000492887 EZH2Q15910 746 aaKnown RBP9.94□□□□□ -0.82
FDPS-218ENST00000492887 SUSD4Q5VX71 490 aa9.94□□□□□ -0.82
FDPS-218ENST00000492887 TBC1D9BQ66K14 1250 aa9.94□□□□□ -0.82
FDPS-218ENST00000492887 LMBR1LQ6UX01 489 aa9.94□□□□□ -0.82
FDPS-218ENST00000492887 CLEC4GQ6UXB4 293 aa9.94□□□□□ -0.82
FDPS-218ENST00000492887 ZNF34Q8IZ26 560 aa9.94□□□□□ -0.82
FDPS-218ENST00000492887 SSH3Q8TE77 659 aa9.94□□□□□ -0.82
FDPS-218ENST00000492887 SETDB2Q96T68 719 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms