RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 TJP1Q07157 1748 aa16.63■□□□□ 0.25
RIPPLY3-203ENST00000490393 LMBR1LQ6UX01 489 aa16.63■□□□□ 0.25
RIPPLY3-203ENST00000490393 RILPL2Q969X0 211 aa16.63■□□□□ 0.25
RIPPLY3-203ENST00000490393 C8orf37Q96NL8 207 aa16.63■□□□□ 0.25
RIPPLY3-203ENST00000490393 ESYT1Q9BSJ8 1104 aa16.63■□□□□ 0.25
RIPPLY3-203ENST00000490393 CICQ96RK0 1608 aaPredicted RBP16.62■□□□□ 0.25
RIPPLY3-203ENST00000490393 PCCAP05165 728 aaPredicted RBP16.62■□□□□ 0.25
RIPPLY3-203ENST00000490393 SMARCC1Q92922 1105 aaPredicted RBP16.62■□□□□ 0.25
RIPPLY3-203ENST00000490393 EAF2Q96CJ1 260 aaPredicted RBP16.62■□□□□ 0.25
RIPPLY3-203ENST00000490393 PLA2G12BQ9BX93 195 aa16.62■□□□□ 0.25
RIPPLY3-203ENST00000490393 AACSQ86V21 672 aa16.61■□□□□ 0.25
RIPPLY3-203ENST00000490393 CNTROBQ8N137 903 aa16.61■□□□□ 0.25
RIPPLY3-203ENST00000490393 ZBTB1Q9Y2K1 713 aa16.61■□□□□ 0.25
RIPPLY3-203ENST00000490393 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.6■□□□□ 0.25
RIPPLY3-203ENST00000490393 EIF5P55010 431 aaKnown RBP16.6■□□□□ 0.25
RIPPLY3-203ENST00000490393 FAM98CQ17RN3 349 aaKnown RBP16.6■□□□□ 0.25
RIPPLY3-203ENST00000490393 ZBTB38Q8NAP3 1195 aaPredicted RBP16.6■□□□□ 0.25
RIPPLY3-203ENST00000490393 KLHDC4Q8TBB5 520 aa16.6■□□□□ 0.25
RIPPLY3-203ENST00000490393 LOC102724428A0A0B4J2F2 783 aa16.59■□□□□ 0.25
RIPPLY3-203ENST00000490393 SIK1P57059 783 aa16.59■□□□□ 0.25
RIPPLY3-203ENST00000490393 INTS5Q6P9B9 1019 aaKnown RBP16.59■□□□□ 0.25
RIPPLY3-203ENST00000490393 ACSBG1Q96GR2 724 aa16.59■□□□□ 0.25
RIPPLY3-203ENST00000490393 SIL1Q9H173 461 aa16.59■□□□□ 0.25
RIPPLY3-203ENST00000490393 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.59■□□□□ 0.25
RIPPLY3-203ENST00000490393 CDHR2Q9BYE9 1310 aa16.59■□□□□ 0.25
RIPPLY3-203ENST00000490393 RABEP1Q15276 862 aa16.59■□□□□ 0.25
RIPPLY3-203ENST00000490393 HSCBQ8IWL3 235 aa16.59■□□□□ 0.25
RIPPLY3-203ENST00000490393 GPR108Q9NPR9 543 aa16.59■□□□□ 0.25
RIPPLY3-203ENST00000490393 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
RIPPLY3-203ENST00000490393 ZNF831Q5JPB2 1677 aa16.58■□□□□ 0.25
RIPPLY3-203ENST00000490393 AK9Q5TCS8 1911 aa16.58■□□□□ 0.24
RIPPLY3-203ENST00000490393 CSF1RP07333 972 aa16.58■□□□□ 0.24
RIPPLY3-203ENST00000490393 ATP6V1AP38606 617 aa16.58■□□□□ 0.24
RIPPLY3-203ENST00000490393 HLFQ16534 295 aa16.58■□□□□ 0.24
RIPPLY3-203ENST00000490393 IL17RAQ96F46 866 aa16.58■□□□□ 0.24
RIPPLY3-203ENST00000490393 ANTXR1Q9H6X2 564 aa16.58■□□□□ 0.24
RIPPLY3-203ENST00000490393 USP21Q9UK80 565 aa16.58■□□□□ 0.24
RIPPLY3-203ENST00000490393 ZNF330Q9Y3S2 320 aaPredicted RBP16.58■□□□□ 0.24
RIPPLY3-203ENST00000490393 RREB1Q92766 1687 aa16.57■□□□□ 0.24
RIPPLY3-203ENST00000490393 CIAO1O76071 339 aa16.57■□□□□ 0.24
RIPPLY3-203ENST00000490393 NLRP10Q86W26 655 aa16.57■□□□□ 0.24
RIPPLY3-203ENST00000490393 EVI5LQ96CN4 794 aa16.57■□□□□ 0.24
RIPPLY3-203ENST00000490393 CCDC87Q9NVE4 849 aa16.57■□□□□ 0.24
RIPPLY3-203ENST00000490393 TNNI3KQ59H18 835 aa16.56■□□□□ 0.24
RIPPLY3-203ENST00000490393 DZIP3Q86Y13 1208 aaKnown RBP16.56■□□□□ 0.24
RIPPLY3-203ENST00000490393 IL27Q8NEV9 243 aa16.56■□□□□ 0.24
RIPPLY3-203ENST00000490393 CCDC8Q9H0W5 538 aaPredicted RBP16.56■□□□□ 0.24
RIPPLY3-203ENST00000490393 FPGT-TNNI3KV9GXZ4 949 aa16.56■□□□□ 0.24
RIPPLY3-203ENST00000490393 ANKRD36CQ5JPF3 1778 aa16.56■□□□□ 0.24
RIPPLY3-203ENST00000490393 PALLDQ8WX93 1383 aa16.56■□□□□ 0.24
RIPPLY3-203ENST00000490393 IL15P40933 162 aaPredicted RBP16.56■□□□□ 0.24
RIPPLY3-203ENST00000490393 TFCP2Q12800 502 aa16.56■□□□□ 0.24
RIPPLY3-203ENST00000490393 ATG9AQ7Z3C6 839 aa16.56■□□□□ 0.24
RIPPLY3-203ENST00000490393 NUP98P52948 1817 aa16.56■□□□□ 0.24
RIPPLY3-203ENST00000490393 CRKLP46109 303 aaKnown RBP16.55■□□□□ 0.24
RIPPLY3-203ENST00000490393 ZNF34Q8IZ26 560 aa16.55■□□□□ 0.24
RIPPLY3-203ENST00000490393 EYA2O00167 538 aa16.54■□□□□ 0.24
RIPPLY3-203ENST00000490393 SGSM2O43147 1006 aa16.54■□□□□ 0.24
RIPPLY3-203ENST00000490393 KCNQ2O43526 872 aa16.54■□□□□ 0.24
RIPPLY3-203ENST00000490393 ANAPC15P60006 121 aa16.54■□□□□ 0.24
RIPPLY3-203ENST00000490393 ITPK1Q13572 414 aa16.54■□□□□ 0.24
RIPPLY3-203ENST00000490393 RTL5Q5HYW3 569 aaPredicted RBP16.54■□□□□ 0.24
RIPPLY3-203ENST00000490393 MAP4K4O95819 1239 aaPredicted RBP16.54■□□□□ 0.24
RIPPLY3-203ENST00000490393 ATP5JP18859 108 aa16.54■□□□□ 0.24
RIPPLY3-203ENST00000490393 FAM89AQ96GI7 184 aa16.54■□□□□ 0.24
RIPPLY3-203ENST00000490393 THSD7AQ9UPZ6 1657 aa16.53■□□□□ 0.24
RIPPLY3-203ENST00000490393 HIP1O00291 1037 aa16.53■□□□□ 0.24
RIPPLY3-203ENST00000490393 ONECUT3O60422 494 aaPredicted RBP16.53■□□□□ 0.24
RIPPLY3-203ENST00000490393 MCCP23508 829 aa16.53■□□□□ 0.24
RIPPLY3-203ENST00000490393 RUFY2Q8WXA3 655 aa16.53■□□□□ 0.24
RIPPLY3-203ENST00000490393 AK7Q96M32 723 aa16.53■□□□□ 0.24
RIPPLY3-203ENST00000490393 ARXQ96QS3 562 aa16.53■□□□□ 0.24
RIPPLY3-203ENST00000490393 TLR7Q9NYK1 1049 aaKnown RBP16.53■□□□□ 0.24
RIPPLY3-203ENST00000490393 CHMP3Q9Y3E7 222 aa16.53■□□□□ 0.24
RIPPLY3-203ENST00000490393 CCDC57Q2TAC2 916 aa16.52■□□□□ 0.24
RIPPLY3-203ENST00000490393 DBNLQ9UJU6 430 aaKnown RBP16.52■□□□□ 0.24
RIPPLY3-203ENST00000490393 TBC1D2BQ9UPU7 963 aa16.52■□□□□ 0.24
RIPPLY3-203ENST00000490393 K7ELQ4 463 aaPredicted RBP16.52■□□□□ 0.23
RIPPLY3-203ENST00000490393 TICAM2Q86XR7 235 aa16.52■□□□□ 0.23
RIPPLY3-203ENST00000490393 GJD4Q96KN9 370 aaPredicted RBP16.52■□□□□ 0.23
RIPPLY3-203ENST00000490393 MYH14Q7Z406 1995 aaKnown RBP16.51■□□□□ 0.23
RIPPLY3-203ENST00000490393 RGL2O15211 777 aa16.51■□□□□ 0.23
RIPPLY3-203ENST00000490393 HSPA1LP34931 641 aa16.51■□□□□ 0.23
RIPPLY3-203ENST00000490393 ANO2Q9NQ90 1003 aa16.51■□□□□ 0.23
RIPPLY3-203ENST00000490393 SNRKQ9NRH2 765 aa16.51■□□□□ 0.23
RIPPLY3-203ENST00000490393 CAMTA2O94983 1202 aa16.5■□□□□ 0.23
RIPPLY3-203ENST00000490393 GPTP24298 496 aa16.5■□□□□ 0.23
RIPPLY3-203ENST00000490393 COL5A3P25940 1745 aaPredicted RBP16.5■□□□□ 0.23
RIPPLY3-203ENST00000490393 A0A0G2JS52 829 aa16.5■□□□□ 0.23
RIPPLY3-203ENST00000490393 CD2BP2O95400 341 aaKnown RBP16.5■□□□□ 0.23
RIPPLY3-203ENST00000490393 HSPA4P34932 840 aa16.5■□□□□ 0.23
RIPPLY3-203ENST00000490393 DDIT3P35638 169 aa16.5■□□□□ 0.23
RIPPLY3-203ENST00000490393 TTLL11Q8NHH1 800 aa16.5■□□□□ 0.23
RIPPLY3-203ENST00000490393 IL25Q9H293 177 aa16.5■□□□□ 0.23
RIPPLY3-203ENST00000490393 BOLA2Q9H3K6 86 aa16.5■□□□□ 0.23
RIPPLY3-203ENST00000490393 DIAPH3Q9NSV4 1193 aa16.5■□□□□ 0.23
RIPPLY3-203ENST00000490393 TRMT112Q9UI30 125 aaKnown RBP16.5■□□□□ 0.23
RIPPLY3-203ENST00000490393 PDE8AO60658 829 aa16.49■□□□□ 0.23
RIPPLY3-203ENST00000490393 IFIT5Q13325 482 aaKnown RBP16.49■□□□□ 0.23
RIPPLY3-203ENST00000490393 LRRC24Q50LG9 513 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms