RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 ITPRIPQ8IWB1 547 aa17.99■□□□□ 0.47
CLDN11-209ENST00000489485 CCDC191Q8NCU4 936 aa17.99■□□□□ 0.47
CLDN11-209ENST00000489485 CWC25Q9NXE8 425 aaPredicted RBP17.99■□□□□ 0.47
CLDN11-209ENST00000489485 TRIM28Q13263 835 aaKnown RBP17.99■□□□□ 0.47
CLDN11-209ENST00000489485 PARP10Q53GL7 1025 aa17.99■□□□□ 0.47
CLDN11-209ENST00000489485 INTS3Q68E01 1043 aaKnown RBP17.99■□□□□ 0.47
CLDN11-209ENST00000489485 CARMIL3Q8ND23 1372 aa17.98■□□□□ 0.47
CLDN11-209ENST00000489485 N4BP2Q86UW6 1770 aaPredicted RBP17.98■□□□□ 0.47
CLDN11-209ENST00000489485 NPHP1O15259 732 aa17.98■□□□□ 0.47
CLDN11-209ENST00000489485 ALDH1L1O75891 902 aa17.98■□□□□ 0.47
CLDN11-209ENST00000489485 SUSD4Q5VX71 490 aa17.98■□□□□ 0.47
CLDN11-209ENST00000489485 CRBNQ96SW2 442 aa17.98■□□□□ 0.47
CLDN11-209ENST00000489485 GCKRQ14397 625 aa17.97■□□□□ 0.47
CLDN11-209ENST00000489485 RTL5Q5HYW3 569 aaPredicted RBP17.97■□□□□ 0.47
CLDN11-209ENST00000489485 PPP1R42Q7Z4L9 355 aa17.97■□□□□ 0.47
CLDN11-209ENST00000489485 NBPF5PQ86XG9 351 aaPredicted RBP17.97■□□□□ 0.47
CLDN11-209ENST00000489485 C9orf78Q9NZ63 289 aaPredicted RBP17.97■□□□□ 0.47
CLDN11-209ENST00000489485 TRMT112Q9UI30 125 aaKnown RBP17.97■□□□□ 0.47
CLDN11-209ENST00000489485 PARP3Q9Y6F1 533 aa17.97■□□□□ 0.47
CLDN11-209ENST00000489485 GTF2E1P29083 439 aaPredicted RBP17.97■□□□□ 0.47
CLDN11-209ENST00000489485 DDR1Q08345 913 aa17.97■□□□□ 0.47
CLDN11-209ENST00000489485 POLRMTO00411 1230 aaKnown RBP17.96■□□□□ 0.47
CLDN11-209ENST00000489485 SERPINB2P05120 415 aa17.96■□□□□ 0.47
CLDN11-209ENST00000489485 EXOC6Q8TAG9 804 aa17.96■□□□□ 0.47
CLDN11-209ENST00000489485 UTP14AQ9BVJ6 771 aaKnown RBP17.96■□□□□ 0.47
CLDN11-209ENST00000489485 COL24A1Q17RW2 1714 aa17.95■□□□□ 0.46
CLDN11-209ENST00000489485 MVPQ14764 893 aaKnown RBP17.95■□□□□ 0.46
CLDN11-209ENST00000489485 TPTE2Q6XPS3 522 aa17.95■□□□□ 0.46
CLDN11-209ENST00000489485 JARID2Q92833 1246 aaPredicted RBP17.95■□□□□ 0.46
CLDN11-209ENST00000489485 FAM89AQ96GI7 184 aa17.95■□□□□ 0.46
CLDN11-209ENST00000489485 NYXQ9GZU5 481 aa17.95■□□□□ 0.46
CLDN11-209ENST00000489485 POLD1P28340 1107 aa17.95■□□□□ 0.46
CLDN11-209ENST00000489485 NUTM1Q86Y26 1132 aa17.95■□□□□ 0.46
CLDN11-209ENST00000489485 NTSR2O95665 410 aa17.94■□□□□ 0.46
CLDN11-209ENST00000489485 UBE3BQ7Z3V4 1068 aa17.94■□□□□ 0.46
CLDN11-209ENST00000489485 CNBD1Q8NA66 436 aa17.94■□□□□ 0.46
CLDN11-209ENST00000489485 ZBTB38Q8NAP3 1195 aaPredicted RBP17.94■□□□□ 0.46
CLDN11-209ENST00000489485 GRM8O00222 908 aa17.93■□□□□ 0.46
CLDN11-209ENST00000489485 CCDC24Q8N4L8 307 aa17.93■□□□□ 0.46
CLDN11-209ENST00000489485 USP44Q9H0E7 712 aa17.93■□□□□ 0.46
CLDN11-209ENST00000489485 SH3TC1Q8TE82 1336 aa17.93■□□□□ 0.46
CLDN11-209ENST00000489485 NBPF7P0C2Y1 421 aaPredicted RBP17.92■□□□□ 0.46
CLDN11-209ENST00000489485 SYNE4Q8N205 404 aa17.92■□□□□ 0.46
CLDN11-209ENST00000489485 SPON1Q9HCB6 807 aa17.92■□□□□ 0.46
CLDN11-209ENST00000489485 DDX19BQ9UMR2 479 aa17.92■□□□□ 0.46
CLDN11-209ENST00000489485 PCCAP05165 728 aaPredicted RBP17.92■□□□□ 0.46
CLDN11-209ENST00000489485 ERFEQ4G0M1 354 aa17.92■□□□□ 0.46
CLDN11-209ENST00000489485 PRR5LQ6MZQ0 368 aa17.92■□□□□ 0.46
CLDN11-209ENST00000489485 MEIS3Q99687 375 aa17.92■□□□□ 0.46
CLDN11-209ENST00000489485 H7C1W4 665 aa17.91■□□□□ 0.46
CLDN11-209ENST00000489485 IBTKQ9P2D0 1353 aaPredicted RBP17.91■□□□□ 0.46
CLDN11-209ENST00000489485 SRCAPQ6ZRS2 3230 aa17.9■□□□□ 0.46
CLDN11-209ENST00000489485 UBTFL1P0CB47 393 aaPredicted RBP17.9■□□□□ 0.46
CLDN11-209ENST00000489485 ST5P78524 1137 aa17.9■□□□□ 0.46
CLDN11-209ENST00000489485 ZBTB7BO15156 539 aaPredicted RBP17.9■□□□□ 0.46
CLDN11-209ENST00000489485 NRXN2Q9P2S2 1712 aa17.89■□□□□ 0.45
CLDN11-209ENST00000489485 IRS4O14654 1257 aaPredicted RBP17.89■□□□□ 0.45
CLDN11-209ENST00000489485 GNAI3P08754 354 aa17.89■□□□□ 0.45
CLDN11-209ENST00000489485 HCLS1P14317 486 aaPredicted RBP17.89■□□□□ 0.45
CLDN11-209ENST00000489485 PTGER2P43116 358 aa17.89■□□□□ 0.45
CLDN11-209ENST00000489485 SGIP1Q9BQI5 828 aa17.88■□□□□ 0.45
CLDN11-209ENST00000489485 UTYO14607 1347 aa17.88■□□□□ 0.45
CLDN11-209ENST00000489485 CASP7P55210 303 aa17.88■□□□□ 0.45
CLDN11-209ENST00000489485 CHMP4BQ9H444 224 aaKnown RBP17.88■□□□□ 0.45
CLDN11-209ENST00000489485 CDHR2Q9BYE9 1310 aa17.88■□□□□ 0.45
CLDN11-209ENST00000489485 ABCC12Q96J65 1359 aa17.88■□□□□ 0.45
CLDN11-209ENST00000489485 DDX60Q8IY21 1712 aaKnown RBP17.87■□□□□ 0.45
CLDN11-209ENST00000489485 HSP90B1P14625 803 aaKnown RBP17.86■□□□□ 0.45
CLDN11-209ENST00000489485 KLHL34Q8N239 644 aa17.86■□□□□ 0.45
CLDN11-209ENST00000489485 SUCLG2Q96I99 432 aa17.86■□□□□ 0.45
CLDN11-209ENST00000489485 PPP1R1BQ9UD71 204 aaPredicted RBP17.86■□□□□ 0.45
CLDN11-209ENST00000489485 MYH3P11055 1940 aa17.86■□□□□ 0.45
CLDN11-209ENST00000489485 SLC10A5Q5PT55 438 aa17.86■□□□□ 0.45
CLDN11-209ENST00000489485 C1orf115Q9H7X2 142 aa17.86■□□□□ 0.45
CLDN11-209ENST00000489485 ZBTB40Q9NUA8 1239 aa17.86■□□□□ 0.45
CLDN11-209ENST00000489485 HDAC5Q9UQL6 1122 aa17.86■□□□□ 0.45
CLDN11-209ENST00000489485 LRRFIP2Q9Y608 721 aaKnown RBP17.86■□□□□ 0.45
CLDN11-209ENST00000489485 PDE8AO60658 829 aa17.85■□□□□ 0.45
CLDN11-209ENST00000489485 GNAI2P04899 355 aa17.85■□□□□ 0.45
CLDN11-209ENST00000489485 ERICH6BQ5W0A0 696 aa17.85■□□□□ 0.45
CLDN11-209ENST00000489485 NLRP3Q96P20 1036 aa17.85■□□□□ 0.45
CLDN11-209ENST00000489485 BRIP1Q9BX63 1249 aa17.85■□□□□ 0.45
CLDN11-209ENST00000489485 LAMB2P55268 1798 aa17.84■□□□□ 0.45
CLDN11-209ENST00000489485 ANKRD31Q8N7Z5 1873 aa17.84■□□□□ 0.45
CLDN11-209ENST00000489485 KAZALD1Q96I82 304 aa17.84■□□□□ 0.45
CLDN11-209ENST00000489485 CCDC85AQ96PX6 553 aaPredicted RBP17.84■□□□□ 0.45
CLDN11-209ENST00000489485 BICC1Q9H694 974 aaKnown RBP17.84■□□□□ 0.45
CLDN11-209ENST00000489485 TNRC6CQ9HCJ0 1690 aaKnown RBP17.83■□□□□ 0.45
CLDN11-209ENST00000489485 EPHA10Q5JZY3 1008 aa17.83■□□□□ 0.44
CLDN11-209ENST00000489485 PLA2G12BQ9BX93 195 aa17.83■□□□□ 0.44
CLDN11-209ENST00000489485 CHMP3Q9Y3E7 222 aa17.83■□□□□ 0.44
CLDN11-209ENST00000489485 PDE6BP35913 854 aa17.82■□□□□ 0.44
CLDN11-209ENST00000489485 CTSWP56202 376 aa17.82■□□□□ 0.44
CLDN11-209ENST00000489485 FOXO4P98177 505 aa17.82■□□□□ 0.44
CLDN11-209ENST00000489485 C3orf67Q6ZVT6 689 aa17.82■□□□□ 0.44
CLDN11-209ENST00000489485 LMBR1LQ6UX01 489 aa17.82■□□□□ 0.44
CLDN11-209ENST00000489485 C10orf71Q711Q0 1435 aa17.81■□□□□ 0.44
CLDN11-209ENST00000489485 TTLL11Q8NHH1 800 aa17.81■□□□□ 0.44
CLDN11-209ENST00000489485 AAMPQ13685 434 aa17.8■□□□□ 0.44
CLDN11-209ENST00000489485 RIC1Q4ADV7 1423 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms