RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ITGBL1O95965 494 aaPredicted RBP9.01□□□□□ -0.97
LIMD1-204ENST00000474665 GYS1P13807 737 aa9.01□□□□□ -0.97
LIMD1-204ENST00000474665 FKBP8Q14318 412 aa9.01□□□□□ -0.97
LIMD1-204ENST00000474665 XAGE3Q8WTP9 111 aa9.01□□□□□ -0.97
LIMD1-204ENST00000474665 BEGAINQ9BUH8 593 aa9.01□□□□□ -0.97
LIMD1-204ENST00000474665 PHAXQ9H814 394 aaKnown RBP9.01□□□□□ -0.97
LIMD1-204ENST00000474665 ZNF219Q9P2Y4 722 aaPredicted RBP9.01□□□□□ -0.97
LIMD1-204ENST00000474665 DBF4Q9UBU7 674 aaPredicted RBP9.01□□□□□ -0.97
LIMD1-204ENST00000474665 NARFQ9UHQ1 456 aa9.01□□□□□ -0.97
LIMD1-204ENST00000474665 DLL1O00548 723 aa9□□□□□ -0.97
LIMD1-204ENST00000474665 RFC4P35249 363 aa9□□□□□ -0.97
LIMD1-204ENST00000474665 HLFQ16534 295 aa9□□□□□ -0.97
LIMD1-204ENST00000474665 CCDC30Q5VVM6 783 aa9□□□□□ -0.97
LIMD1-204ENST00000474665 USPL1Q5W0Q7 1092 aa9□□□□□ -0.97
LIMD1-204ENST00000474665 COPS6Q7L5N1 327 aa9□□□□□ -0.97
LIMD1-204ENST00000474665 SSH1Q8WYL5 1049 aa9□□□□□ -0.97
LIMD1-204ENST00000474665 ZNF330Q9Y3S2 320 aaPredicted RBP9□□□□□ -0.97
LIMD1-204ENST00000474665 AFDNP55196 1824 aaKnown RBP8.99□□□□□ -0.97
LIMD1-204ENST00000474665 DDR1Q08345 913 aa8.99□□□□□ -0.97
LIMD1-204ENST00000474665 GRM1Q13255 1194 aa8.99□□□□□ -0.97
LIMD1-204ENST00000474665 HABP4Q5JVS0 413 aaKnown RBP8.99□□□□□ -0.97
LIMD1-204ENST00000474665 DZIP3Q86Y13 1208 aaKnown RBP8.99□□□□□ -0.97
LIMD1-204ENST00000474665 A0A087WZG4 1122 aa8.98□□□□□ -0.97
LIMD1-204ENST00000474665 DDNO94850 711 aaPredicted RBP8.98□□□□□ -0.97
LIMD1-204ENST00000474665 SLC4A2P04920 1241 aa8.98□□□□□ -0.97
LIMD1-204ENST00000474665 TM4SF1P30408 202 aa8.98□□□□□ -0.97
LIMD1-204ENST00000474665 RARSP54136 660 aaKnown RBP8.98□□□□□ -0.97
LIMD1-204ENST00000474665 AIMP1Q12904 312 aaKnown RBP8.98□□□□□ -0.97
LIMD1-204ENST00000474665 NFIXQ14938 502 aa8.98□□□□□ -0.97
LIMD1-204ENST00000474665 MRPL50Q8N5N7 158 aaKnown RBP8.98□□□□□ -0.97
LIMD1-204ENST00000474665 HYPKQ9NX55 129 aa8.98□□□□□ -0.97
LIMD1-204ENST00000474665 ABT1Q9ULW3 272 aaKnown RBP8.98□□□□□ -0.97
LIMD1-204ENST00000474665 ARFGEF2Q9Y6D5 1785 aa8.98□□□□□ -0.97
LIMD1-204ENST00000474665 MAP3K15Q6ZN16 1313 aa8.98□□□□□ -0.97
LIMD1-204ENST00000474665 ANKRD36CQ5JPF3 1778 aa8.97□□□□□ -0.97
LIMD1-204ENST00000474665 ERVV-1B6SEH8 477 aa8.97□□□□□ -0.97
LIMD1-204ENST00000474665 NFKBIEO00221 500 aa8.97□□□□□ -0.97
LIMD1-204ENST00000474665 ZPR1O75312 459 aa8.97□□□□□ -0.97
LIMD1-204ENST00000474665 CT47B1P0C2W7 299 aaPredicted RBP8.97□□□□□ -0.97
LIMD1-204ENST00000474665 TBC1D9BQ66K14 1250 aa8.97□□□□□ -0.97
LIMD1-204ENST00000474665 PAXIP1Q6ZW49 1069 aaPredicted RBP8.97□□□□□ -0.97
LIMD1-204ENST00000474665 LDHDQ86WU2 507 aa8.97□□□□□ -0.97
LIMD1-204ENST00000474665 GPR101Q96P66 508 aaPredicted RBP8.97□□□□□ -0.97
LIMD1-204ENST00000474665 BCL2L13Q9BXK5 485 aa8.97□□□□□ -0.97
LIMD1-204ENST00000474665 ZBTB3Q9H5J0 574 aa8.97□□□□□ -0.97
LIMD1-204ENST00000474665 TIAM2Q8IVF5 1701 aa8.97□□□□□ -0.97
LIMD1-204ENST00000474665 NRXN2Q9P2S2 1712 aa8.97□□□□□ -0.97
LIMD1-204ENST00000474665 POLRMTO00411 1230 aaKnown RBP8.96□□□□□ -0.98
LIMD1-204ENST00000474665 RGL2O15211 777 aa8.96□□□□□ -0.98
LIMD1-204ENST00000474665 BCAR3O75815 825 aa8.96□□□□□ -0.98
LIMD1-204ENST00000474665 BRPF1P55201 1214 aaPredicted RBP8.96□□□□□ -0.98
LIMD1-204ENST00000474665 FLIIQ13045 1269 aa8.96□□□□□ -0.98
LIMD1-204ENST00000474665 ERFEQ4G0M1 354 aa8.96□□□□□ -0.98
LIMD1-204ENST00000474665 CYP4F22Q6NT55 531 aa8.96□□□□□ -0.98
LIMD1-204ENST00000474665 CLEC4GQ6UXB4 293 aa8.96□□□□□ -0.98
LIMD1-204ENST00000474665 GIGYF2Q6Y7W6 1299 aaKnown RBP8.96□□□□□ -0.98
LIMD1-204ENST00000474665 ANKRD13DQ6ZTN6 518 aa8.96□□□□□ -0.98
LIMD1-204ENST00000474665 ZNF34Q8IZ26 560 aa8.96□□□□□ -0.98
LIMD1-204ENST00000474665 PLBD2Q8NHP8 589 aa8.96□□□□□ -0.98
LIMD1-204ENST00000474665 ZNF428Q96B54 188 aa8.96□□□□□ -0.98
LIMD1-204ENST00000474665 CAPNS2Q96L46 248 aa8.96□□□□□ -0.98
LIMD1-204ENST00000474665 UBN2Q6ZU65 1347 aa8.96□□□□□ -0.98
LIMD1-204ENST00000474665 PI4KAP2A4QPH2 592 aa8.95□□□□□ -0.98
LIMD1-204ENST00000474665 F6X3S4 739 aa8.95□□□□□ -0.98
LIMD1-204ENST00000474665 AOC2O75106 756 aa8.95□□□□□ -0.98
LIMD1-204ENST00000474665 ALDH1L2Q3SY69 923 aa8.95□□□□□ -0.98
LIMD1-204ENST00000474665 EAPPQ56P03 285 aaPredicted RBP8.95□□□□□ -0.98
LIMD1-204ENST00000474665 BICDL1Q6ZP65 573 aa8.95□□□□□ -0.98
LIMD1-204ENST00000474665 PI4KAP1Q8N8J0 262 aa8.95□□□□□ -0.98
LIMD1-204ENST00000474665 GCC1Q96CN9 775 aa8.95□□□□□ -0.98
LIMD1-204ENST00000474665 ISCA1Q9BUE6 129 aa8.95□□□□□ -0.98
LIMD1-204ENST00000474665 STK31Q9BXU1 1019 aa8.95□□□□□ -0.98
LIMD1-204ENST00000474665 CLEC11AQ9Y240 323 aa8.95□□□□□ -0.98
LIMD1-204ENST00000474665 CCDC88AQ3V6T2 1871 aa8.95□□□□□ -0.98
LIMD1-204ENST00000474665 CASP8AP2Q9UKL3 1982 aa8.95□□□□□ -0.98
LIMD1-204ENST00000474665 ANKRD31Q8N7Z5 1873 aa8.94□□□□□ -0.98
LIMD1-204ENST00000474665 IGKV5-2P06315 115 aa8.94□□□□□ -0.98
LIMD1-204ENST00000474665 GPTP24298 496 aa8.94□□□□□ -0.98
LIMD1-204ENST00000474665 TCIRG1Q13488 830 aa8.94□□□□□ -0.98
LIMD1-204ENST00000474665 MAP1SQ66K74 1059 aaPredicted RBP8.94□□□□□ -0.98
LIMD1-204ENST00000474665 KSR2Q6VAB6 950 aa8.94□□□□□ -0.98
LIMD1-204ENST00000474665 KIF6Q6ZMV9 814 aa8.94□□□□□ -0.98
LIMD1-204ENST00000474665 CHMP4AQ9BY43 222 aa8.94□□□□□ -0.98
LIMD1-204ENST00000474665 TAF1DQ9H5J8 278 aaPredicted RBP8.94□□□□□ -0.98
LIMD1-204ENST00000474665 SMC4Q9NTJ3 1288 aa8.94□□□□□ -0.98
LIMD1-204ENST00000474665 TNNQ9UQP3 1299 aa8.94□□□□□ -0.98
LIMD1-204ENST00000474665 MAP3K2Q9Y2U5 619 aa8.94□□□□□ -0.98
LIMD1-204ENST00000474665 CARMIL3Q8ND23 1372 aa8.94□□□□□ -0.98
LIMD1-204ENST00000474665 ATP5J2-PTCD1G3V325 749 aa8.93□□□□□ -0.98
LIMD1-204ENST00000474665 FMR1Q06787 632 aaKnown RBP eCLIP8.93□□□□□ -0.98
LIMD1-204ENST00000474665 TRIM28Q13263 835 aaKnown RBP8.93□□□□□ -0.98
LIMD1-204ENST00000474665 SUSD4Q5VX71 490 aa8.93□□□□□ -0.98
LIMD1-204ENST00000474665 NLRP10Q86W26 655 aa8.93□□□□□ -0.98
LIMD1-204ENST00000474665 CNTROBQ8N137 903 aa8.93□□□□□ -0.98
LIMD1-204ENST00000474665 SYNE4Q8N205 404 aa8.93□□□□□ -0.98
LIMD1-204ENST00000474665 CCDC24Q8N4L8 307 aa8.93□□□□□ -0.98
LIMD1-204ENST00000474665 METTL22Q9BUU2 404 aaPredicted RBP8.93□□□□□ -0.98
LIMD1-204ENST00000474665 NIP7Q9Y221 180 aaKnown RBP eCLIP8.93□□□□□ -0.98
LIMD1-204ENST00000474665 LTBP1Q14766 1721 aa8.92□□□□□ -0.98
LIMD1-204ENST00000474665 SERPINB2P05120 415 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms