RNA–Protein interactions for RNA: ENST00000471462.2

SUSD3-204, Transcript of sushi domain containing 3, humanhuman

TSL 3

Gene SUSD3, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-204ENST00000471462 DIAPH1O60610 1272 aaKnown RBP12.69□□□□□ -0.38
SUSD3-204ENST00000471462 PIP4K2AP48426 406 aaPredicted RBP12.69□□□□□ -0.38
SUSD3-204ENST00000471462 USP50Q70EL3 339 aaPredicted RBP12.69□□□□□ -0.38
SUSD3-204ENST00000471462 ZNF652Q9Y2D9 606 aa12.69□□□□□ -0.38
SUSD3-204ENST00000471462 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
SUSD3-204ENST00000471462 CEMIPQ8WUJ3 1361 aa12.69□□□□□ -0.38
SUSD3-204ENST00000471462 RGL2O15211 777 aa12.68□□□□□ -0.38
SUSD3-204ENST00000471462 CA12O43570 354 aa12.68□□□□□ -0.38
SUSD3-204ENST00000471462 LMOD1P29536 600 aaPredicted RBP12.68□□□□□ -0.38
SUSD3-204ENST00000471462 EIF6P56537 245 aaKnown RBP12.68□□□□□ -0.38
SUSD3-204ENST00000471462 NIP7Q9Y221 180 aaKnown RBP eCLIP12.68□□□□□ -0.38
SUSD3-204ENST00000471462 PRAMEF22A3QJZ6 481 aa12.67□□□□□ -0.38
SUSD3-204ENST00000471462 CRY2Q49AN0 593 aa12.67□□□□□ -0.38
SUSD3-204ENST00000471462 SAPCD2Q86UD0 394 aa12.67□□□□□ -0.38
SUSD3-204ENST00000471462 GAS2L2Q8NHY3 880 aa12.67□□□□□ -0.38
SUSD3-204ENST00000471462 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
SUSD3-204ENST00000471462 FAM177BA6PVY3 158 aa12.66□□□□□ -0.38
SUSD3-204ENST00000471462 BTBD11A6QL63 1104 aa12.66□□□□□ -0.38
SUSD3-204ENST00000471462 CC2D2BQ6DHV5 1058 aa12.66□□□□□ -0.38
SUSD3-204ENST00000471462 HHIPL1Q96JK4 782 aa12.66□□□□□ -0.38
SUSD3-204ENST00000471462 NBPF26B4DH59 902 aa12.65□□□□□ -0.38
SUSD3-204ENST00000471462 BRPF1P55201 1214 aaPredicted RBP12.65□□□□□ -0.38
SUSD3-204ENST00000471462 DGKZQ13574 1117 aa12.65□□□□□ -0.38
SUSD3-204ENST00000471462 CNGB1Q14028 1251 aaPredicted RBP12.65□□□□□ -0.38
SUSD3-204ENST00000471462 NBPF10Q6P3W6 841 aaKnown RBP12.65□□□□□ -0.38
SUSD3-204ENST00000471462 NBPF15Q8N660 670 aa12.65□□□□□ -0.38
SUSD3-204ENST00000471462 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
SUSD3-204ENST00000471462 SNRPA1P09661 255 aaKnown RBP12.64□□□□□ -0.39
SUSD3-204ENST00000471462 DDX10Q13206 875 aaKnown RBP12.64□□□□□ -0.39
SUSD3-204ENST00000471462 HLFQ16534 295 aa12.64□□□□□ -0.39
SUSD3-204ENST00000471462 LARGE2Q8N3Y3 721 aa12.64□□□□□ -0.39
SUSD3-204ENST00000471462 TRPM7Q96QT4 1865 aa12.63□□□□□ -0.39
SUSD3-204ENST00000471462 CELF2O95319 508 aaKnown RBP12.63□□□□□ -0.39
SUSD3-204ENST00000471462 HOXA10P31260 410 aaPredicted RBP12.63□□□□□ -0.39
SUSD3-204ENST00000471462 GRIPAP1Q4V328 841 aa12.63□□□□□ -0.39
SUSD3-204ENST00000471462 SLC51AQ86UW1 340 aa12.63□□□□□ -0.39
SUSD3-204ENST00000471462 ADARB2Q9NS39 739 aaKnown RBP12.63□□□□□ -0.39
SUSD3-204ENST00000471462 GPRC5DQ9NZD1 345 aa12.63□□□□□ -0.39
SUSD3-204ENST00000471462 PGAP2Q9UHJ9 254 aa12.63□□□□□ -0.39
SUSD3-204ENST00000471462 ABCC12Q96J65 1359 aa12.63□□□□□ -0.39
SUSD3-204ENST00000471462 COL3A1P02461 1466 aaPredicted RBP12.63□□□□□ -0.39
SUSD3-204ENST00000471462 PER1O15534 1290 aaPredicted RBP12.62□□□□□ -0.39
SUSD3-204ENST00000471462 GTF2E1P29083 439 aaPredicted RBP12.62□□□□□ -0.39
SUSD3-204ENST00000471462 CIAPIN1Q6FI81 312 aa12.62□□□□□ -0.39
SUSD3-204ENST00000471462 PHACTR3Q96KR7 559 aa12.62□□□□□ -0.39
SUSD3-204ENST00000471462 PDE4DIPQ5VU43 2346 aa12.61□□□□□ -0.39
SUSD3-204ENST00000471462 U2SURPO15042 1029 aaKnown RBP12.61□□□□□ -0.39
SUSD3-204ENST00000471462 NUTM1Q86Y26 1132 aa12.61□□□□□ -0.39
SUSD3-204ENST00000471462 NIM1KQ8IY84 436 aa12.61□□□□□ -0.39
SUSD3-204ENST00000471462 ZIC5Q96T25 663 aa12.61□□□□□ -0.39
SUSD3-204ENST00000471462 GLIS2Q9BZE0 524 aaPredicted RBP12.61□□□□□ -0.39
SUSD3-204ENST00000471462 CASP8AP2Q9UKL3 1982 aa12.61□□□□□ -0.39
SUSD3-204ENST00000471462 RPGRQ92834 1020 aaKnown RBP12.6□□□□□ -0.39
SUSD3-204ENST00000471462 CRAMP1Q96RY5 1269 aa12.6□□□□□ -0.39
SUSD3-204ENST00000471462 NYXQ9GZU5 481 aa12.6□□□□□ -0.39
SUSD3-204ENST00000471462 RIC1Q4ADV7 1423 aa12.6□□□□□ -0.39
SUSD3-204ENST00000471462 NPC1L1Q9UHC9 1359 aa12.59□□□□□ -0.39
SUSD3-204ENST00000471462 HIRAP54198 1017 aaPredicted RBP12.59□□□□□ -0.39
SUSD3-204ENST00000471462 CXCL9Q07325 125 aa12.59□□□□□ -0.39
SUSD3-204ENST00000471462 NOGQ13253 232 aa12.59□□□□□ -0.39
SUSD3-204ENST00000471462 CC2D1BQ5T0F9 858 aaKnown RBP12.59□□□□□ -0.39
SUSD3-204ENST00000471462 ZC3H15Q8WU90 426 aaKnown RBP12.59□□□□□ -0.39
SUSD3-204ENST00000471462 VPS33BQ9H267 617 aa12.59□□□□□ -0.39
SUSD3-204ENST00000471462 ERVV-1B6SEH8 477 aa12.58□□□□□ -0.4
SUSD3-204ENST00000471462 PPEF1O14829 653 aaPredicted RBP12.58□□□□□ -0.4
SUSD3-204ENST00000471462 PPIP5K2O43314 1243 aa12.58□□□□□ -0.4
SUSD3-204ENST00000471462 GMPSP49915 693 aaPredicted RBP12.58□□□□□ -0.4
SUSD3-204ENST00000471462 AOC3Q16853 763 aa12.58□□□□□ -0.4
SUSD3-204ENST00000471462 RBM17Q96I25 401 aaKnown RBP12.58□□□□□ -0.4
SUSD3-204ENST00000471462 ZNRF3Q9ULT6 936 aa12.58□□□□□ -0.4
SUSD3-204ENST00000471462 TCERG1O14776 1098 aaKnown RBP12.57□□□□□ -0.4
SUSD3-204ENST00000471462 PRKAR2BP31323 418 aa12.57□□□□□ -0.4
SUSD3-204ENST00000471462 SOX10P56693 466 aa12.57□□□□□ -0.4
SUSD3-204ENST00000471462 C3orf67Q6ZVT6 689 aa12.57□□□□□ -0.4
SUSD3-204ENST00000471462 CDC37L1Q7L3B6 337 aa12.57□□□□□ -0.4
SUSD3-204ENST00000471462 MCM10Q7L590 875 aa12.57□□□□□ -0.4
SUSD3-204ENST00000471462 RTFDC1Q9BY42 306 aaPredicted RBP12.57□□□□□ -0.4
SUSD3-204ENST00000471462 RSPH6AQ9H0K4 717 aa12.57□□□□□ -0.4
SUSD3-204ENST00000471462 ZNF408Q9H9D4 720 aa12.57□□□□□ -0.4
SUSD3-204ENST00000471462 UBN2Q6ZU65 1347 aa12.57□□□□□ -0.4
SUSD3-204ENST00000471462 CDHR2Q9BYE9 1310 aa12.57□□□□□ -0.4
SUSD3-204ENST00000471462 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
SUSD3-204ENST00000471462 FAM155AB1AL88 458 aaPredicted RBP12.56□□□□□ -0.4
SUSD3-204ENST00000471462 PRPF38BQ5VTL8 546 aaKnown RBP12.56□□□□□ -0.4
SUSD3-204ENST00000471462 SUSD4Q5VX71 490 aa12.56□□□□□ -0.4
SUSD3-204ENST00000471462 SAGE1Q9NXZ1 904 aa12.56□□□□□ -0.4
SUSD3-204ENST00000471462 ATP6V0A2Q9Y487 856 aa12.56□□□□□ -0.4
SUSD3-204ENST00000471462 HUNKP57058 714 aa12.55□□□□□ -0.4
SUSD3-204ENST00000471462 TRPM4Q8TD43 1214 aa12.55□□□□□ -0.4
SUSD3-204ENST00000471462 MAP3K15Q6ZN16 1313 aa12.55□□□□□ -0.4
SUSD3-204ENST00000471462 NTSR2O95665 410 aa12.54□□□□□ -0.4
SUSD3-204ENST00000471462 GPTP24298 496 aa12.54□□□□□ -0.4
SUSD3-204ENST00000471462 DCTN1Q14203 1278 aa12.54□□□□□ -0.4
SUSD3-204ENST00000471462 DLK2Q6UY11 383 aa12.54□□□□□ -0.4
SUSD3-204ENST00000471462 TTLL7Q6ZT98 887 aa12.54□□□□□ -0.4
SUSD3-204ENST00000471462 ZNF34Q8IZ26 560 aa12.54□□□□□ -0.4
SUSD3-204ENST00000471462 NGEFQ8N5V2 710 aa12.54□□□□□ -0.4
SUSD3-204ENST00000471462 SUPT20HQ8NEM7 779 aa12.54□□□□□ -0.4
SUSD3-204ENST00000471462 RTF1Q92541 710 aaKnown RBP12.54□□□□□ -0.4
SUSD3-204ENST00000471462 SHTN1A0MZ66 631 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms