RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 GPRC5DQ9NZD1 345 aa16.25■□□□□ 0.19
LSM2-209ENST00000470083 TRPM7Q96QT4 1865 aa16.25■□□□□ 0.19
LSM2-209ENST00000470083 GNAT3A8MTJ3 354 aa16.24■□□□□ 0.19
LSM2-209ENST00000470083 GLIS2Q9BZE0 524 aaPredicted RBP16.24■□□□□ 0.19
LSM2-209ENST00000470083 USP16Q9Y5T5 823 aa16.24■□□□□ 0.19
LSM2-209ENST00000470083 FAM177BA6PVY3 158 aa16.23■□□□□ 0.19
LSM2-209ENST00000470083 NIM1KQ8IY84 436 aa16.23■□□□□ 0.19
LSM2-209ENST00000470083 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
LSM2-209ENST00000470083 PGAP2Q9UHJ9 254 aa16.23■□□□□ 0.19
LSM2-209ENST00000470083 KNSTRNQ9Y448 316 aa16.23■□□□□ 0.19
LSM2-209ENST00000470083 KCNQ3O43525 872 aa16.22■□□□□ 0.19
LSM2-209ENST00000470083 GTF2E1P29083 439 aaPredicted RBP16.22■□□□□ 0.19
LSM2-209ENST00000470083 ZIC5Q96T25 663 aa16.22■□□□□ 0.19
LSM2-209ENST00000470083 SAGE1Q9NXZ1 904 aa16.22■□□□□ 0.19
LSM2-209ENST00000470083 CEMIPQ8WUJ3 1361 aa16.22■□□□□ 0.19
LSM2-209ENST00000470083 BTBD11A6QL63 1104 aa16.21■□□□□ 0.19
LSM2-209ENST00000470083 DIAPH1O60610 1272 aaKnown RBP16.21■□□□□ 0.19
LSM2-209ENST00000470083 HOXA10P31260 410 aaPredicted RBP16.21■□□□□ 0.19
LSM2-209ENST00000470083 ZC3H15Q8WU90 426 aaKnown RBP16.21■□□□□ 0.19
LSM2-209ENST00000470083 ZNF408Q9H9D4 720 aa16.21■□□□□ 0.19
LSM2-209ENST00000470083 ABCC12Q96J65 1359 aa16.21■□□□□ 0.19
LSM2-209ENST00000470083 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
LSM2-209ENST00000470083 NPC1L1Q9UHC9 1359 aa16.19■□□□□ 0.18
LSM2-209ENST00000470083 PRAMEF22A3QJZ6 481 aa16.19■□□□□ 0.18
LSM2-209ENST00000470083 PPIP5K2O43314 1243 aa16.19■□□□□ 0.18
LSM2-209ENST00000470083 SNRPA1P09661 255 aaKnown RBP16.19■□□□□ 0.18
LSM2-209ENST00000470083 AMER1Q5JTC6 1135 aaPredicted RBP16.19■□□□□ 0.18
LSM2-209ENST00000470083 CDC37L1Q7L3B6 337 aa16.19■□□□□ 0.18
LSM2-209ENST00000470083 RPGRQ92834 1020 aaKnown RBP16.19■□□□□ 0.18
LSM2-209ENST00000470083 NYXQ9GZU5 481 aa16.19■□□□□ 0.18
LSM2-209ENST00000470083 VPS33BQ9H267 617 aa16.19■□□□□ 0.18
LSM2-209ENST00000470083 RIC1Q4ADV7 1423 aa16.19■□□□□ 0.18
LSM2-209ENST00000470083 CDHR2Q9BYE9 1310 aa16.19■□□□□ 0.18
LSM2-209ENST00000470083 NBPF26B4DH59 902 aa16.18■□□□□ 0.18
LSM2-209ENST00000470083 GMPSP49915 693 aaPredicted RBP16.18■□□□□ 0.18
LSM2-209ENST00000470083 HUNKP57058 714 aa16.18■□□□□ 0.18
LSM2-209ENST00000470083 CXCL9Q07325 125 aa16.18■□□□□ 0.18
LSM2-209ENST00000470083 HLFQ16534 295 aa16.18■□□□□ 0.18
LSM2-209ENST00000470083 NBPF10Q6P3W6 841 aaKnown RBP16.18■□□□□ 0.18
LSM2-209ENST00000470083 NBPF15Q8N660 670 aa16.18■□□□□ 0.18
LSM2-209ENST00000470083 SIPA1L3O60292 1781 aaPredicted RBP16.18■□□□□ 0.18
LSM2-209ENST00000470083 PPEF1O14829 653 aaPredicted RBP16.17■□□□□ 0.18
LSM2-209ENST00000470083 AOC3Q16853 763 aa16.17■□□□□ 0.18
LSM2-209ENST00000470083 SLC51AQ86UW1 340 aa16.17■□□□□ 0.18
LSM2-209ENST00000470083 NUTM1Q86Y26 1132 aa16.17■□□□□ 0.18
LSM2-209ENST00000470083 ZNRF3Q9ULT6 936 aa16.17■□□□□ 0.18
LSM2-209ENST00000470083 FAM155AB1AL88 458 aaPredicted RBP16.16■□□□□ 0.18
LSM2-209ENST00000470083 HIRAP54198 1017 aaPredicted RBP16.16■□□□□ 0.18
LSM2-209ENST00000470083 CRAMP1Q96RY5 1269 aa16.16■□□□□ 0.18
LSM2-209ENST00000470083 RGMBQ6NW40 437 aa16.15■□□□□ 0.18
LSM2-209ENST00000470083 CTU1Q7Z7A3 348 aaKnown RBP16.15■□□□□ 0.18
LSM2-209ENST00000470083 TRPM4Q8TD43 1214 aa16.15■□□□□ 0.18
LSM2-209ENST00000470083 RBM17Q96I25 401 aaKnown RBP16.15■□□□□ 0.18
LSM2-209ENST00000470083 TIMELESSQ9UNS1 1208 aa16.15■□□□□ 0.18
LSM2-209ENST00000470083 IBTKQ9P2D0 1353 aaPredicted RBP16.14■□□□□ 0.17
LSM2-209ENST00000470083 CCDC102AQ96A19 550 aa16.14■□□□□ 0.17
LSM2-209ENST00000470083 RNF186Q9NXI6 227 aa16.14■□□□□ 0.17
LSM2-209ENST00000470083 TCERG1O14776 1098 aaKnown RBP16.13■□□□□ 0.17
LSM2-209ENST00000470083 TRPA1O75762 1119 aa16.13■□□□□ 0.17
LSM2-209ENST00000470083 EIF4G2P78344 907 aaKnown RBP eCLIP16.13■□□□□ 0.17
LSM2-209ENST00000470083 KIF23Q02241 960 aaPredicted RBP16.13■□□□□ 0.17
LSM2-209ENST00000470083 SUPT20HQ8NEM7 779 aa16.13■□□□□ 0.17
LSM2-209ENST00000470083 GCC1Q96CN9 775 aa16.13■□□□□ 0.17
LSM2-209ENST00000470083 BCL2L13Q9BXK5 485 aa16.13■□□□□ 0.17
LSM2-209ENST00000470083 RTFDC1Q9BY42 306 aaPredicted RBP16.13■□□□□ 0.17
LSM2-209ENST00000470083 TMX4Q9H1E5 349 aaPredicted RBP16.13■□□□□ 0.17
LSM2-209ENST00000470083 ERVV-1B6SEH8 477 aa16.12■□□□□ 0.17
LSM2-209ENST00000470083 U2SURPO15042 1029 aaKnown RBP16.12■□□□□ 0.17
LSM2-209ENST00000470083 TNIP1Q15025 636 aa16.12■□□□□ 0.17
LSM2-209ENST00000470083 USP48Q86UV5 1035 aa16.12■□□□□ 0.17
LSM2-209ENST00000470083 ATP6V0A2Q9Y487 856 aa16.12■□□□□ 0.17
LSM2-209ENST00000470083 HSPA5P11021 654 aaKnown RBP16.11■□□□□ 0.17
LSM2-209ENST00000470083 GBA2Q9HCG7 927 aaPredicted RBP16.11■□□□□ 0.17
LSM2-209ENST00000470083 CNOT7Q9UIV1 285 aaKnown RBP16.11■□□□□ 0.17
LSM2-209ENST00000470083 HPS5Q9UPZ3 1129 aa16.11■□□□□ 0.17
LSM2-209ENST00000470083 COL3A1P02461 1466 aaPredicted RBP16.1■□□□□ 0.17
LSM2-209ENST00000470083 RAD17O75943 681 aa16.1■□□□□ 0.17
LSM2-209ENST00000470083 ZNF157P51786 506 aaPredicted RBP16.1■□□□□ 0.17
LSM2-209ENST00000470083 KIAA2012Q0VF49 1180 aa16.1■□□□□ 0.17
LSM2-209ENST00000470083 C2orf69Q8N8R5 385 aa16.1■□□□□ 0.17
LSM2-209ENST00000470083 UBN2Q6ZU65 1347 aa16.1■□□□□ 0.17
LSM2-209ENST00000470083 H7C1D1 291 aa16.09■□□□□ 0.17
LSM2-209ENST00000470083 PKN2Q16513 984 aaKnown RBP16.09■□□□□ 0.17
LSM2-209ENST00000470083 DLK2Q6UY11 383 aa16.09■□□□□ 0.17
LSM2-209ENST00000470083 C3orf67Q6ZVT6 689 aa16.09■□□□□ 0.17
LSM2-209ENST00000470083 KRT26Q7Z3Y9 468 aa16.09■□□□□ 0.17
LSM2-209ENST00000470083 PHACTR3Q96KR7 559 aa16.09■□□□□ 0.17
LSM2-209ENST00000470083 MAP3K15Q6ZN16 1313 aa16.09■□□□□ 0.17
LSM2-209ENST00000470083 SHTN1A0MZ66 631 aa16.08■□□□□ 0.16
LSM2-209ENST00000470083 SLC10A3P09131 477 aa16.08■□□□□ 0.16
LSM2-209ENST00000470083 GPTP24298 496 aa16.08■□□□□ 0.16
LSM2-209ENST00000470083 SUSD4Q5VX71 490 aa16.08■□□□□ 0.16
LSM2-209ENST00000470083 DPP8Q6V1X1 898 aaPredicted RBP16.08■□□□□ 0.16
LSM2-209ENST00000470083 MICALL2Q8IY33 904 aa16.08■□□□□ 0.16
LSM2-209ENST00000470083 CSRNP1Q96S65 589 aa16.08■□□□□ 0.16
LSM2-209ENST00000470083 MKI67P46013 3256 aaKnown RBP16.07■□□□□ 0.16
LSM2-209ENST00000470083 NTSR2O95665 410 aa16.07■□□□□ 0.16
LSM2-209ENST00000470083 REM2Q8IYK8 340 aaPredicted RBP16.07■□□□□ 0.16
LSM2-209ENST00000470083 PRKAR2BP31323 418 aa16.06■□□□□ 0.16
LSM2-209ENST00000470083 HABP4Q5JVS0 413 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms