RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 MAP4K4O95819 1239 aaPredicted RBP22.32■■□□□ 1.16
COL9A3-205ENST00000466192 PTPN12Q05209 780 aaKnown RBP22.32■■□□□ 1.16
COL9A3-205ENST00000466192 TCIRG1Q13488 830 aa22.31■■□□□ 1.16
COL9A3-205ENST00000466192 KIF6Q6ZMV9 814 aa22.31■■□□□ 1.16
COL9A3-205ENST00000466192 AACSQ86V21 672 aa22.31■■□□□ 1.16
COL9A3-205ENST00000466192 NGLY1Q96IV0 654 aa22.31■■□□□ 1.16
COL9A3-205ENST00000466192 ESYT1Q9BSJ8 1104 aa22.31■■□□□ 1.16
COL9A3-205ENST00000466192 IFIT2P09913 472 aaKnown RBP22.31■■□□□ 1.16
COL9A3-205ENST00000466192 LMBR1LQ6UX01 489 aa22.31■■□□□ 1.16
COL9A3-205ENST00000466192 EAF2Q96CJ1 260 aaPredicted RBP22.31■■□□□ 1.16
COL9A3-205ENST00000466192 CD2BP2O95400 341 aaKnown RBP22.3■■□□□ 1.16
COL9A3-205ENST00000466192 ZBTB1Q9Y2K1 713 aa22.3■■□□□ 1.16
COL9A3-205ENST00000466192 A0A0G2JS52 829 aa22.29■■□□□ 1.16
COL9A3-205ENST00000466192 ECHDC1Q9NTX5 307 aa22.29■■□□□ 1.16
COL9A3-205ENST00000466192 ANKRD36CQ5JPF3 1778 aa22.29■■□□□ 1.16
COL9A3-205ENST00000466192 NUP98P52948 1817 aa22.29■■□□□ 1.16
COL9A3-205ENST00000466192 GLRX3O76003 335 aaKnown RBP22.29■■□□□ 1.16
COL9A3-205ENST00000466192 MAP3K15Q6ZN16 1313 aa22.29■■□□□ 1.16
COL9A3-205ENST00000466192 FAM98CQ17RN3 349 aaKnown RBP22.28■■□□□ 1.16
COL9A3-205ENST00000466192 VPS72Q15906 364 aa22.28■■□□□ 1.16
COL9A3-205ENST00000466192 ARXQ96QS3 562 aa22.28■■□□□ 1.16
COL9A3-205ENST00000466192 TRIM28Q13263 835 aaKnown RBP22.27■■□□□ 1.16
COL9A3-205ENST00000466192 CCDC8Q9H0W5 538 aaPredicted RBP22.27■■□□□ 1.16
COL9A3-205ENST00000466192 CNTROBQ8N137 903 aa22.26■■□□□ 1.15
COL9A3-205ENST00000466192 GPATCH3Q96I76 525 aa22.26■■□□□ 1.15
COL9A3-205ENST00000466192 TLR7Q9NYK1 1049 aaKnown RBP22.26■■□□□ 1.15
COL9A3-205ENST00000466192 HLFQ16534 295 aa22.26■■□□□ 1.15
COL9A3-205ENST00000466192 GIGYF2Q6Y7W6 1299 aaKnown RBP22.26■■□□□ 1.15
COL9A3-205ENST00000466192 FNBP4Q8N3X1 1017 aaPredicted RBP22.25■■□□□ 1.15
COL9A3-205ENST00000466192 CHMP3Q9Y3E7 222 aa22.25■■□□□ 1.15
COL9A3-205ENST00000466192 IL25Q9H293 177 aa22.25■■□□□ 1.15
COL9A3-205ENST00000466192 MYH14Q7Z406 1995 aaKnown RBP22.24■■□□□ 1.15
COL9A3-205ENST00000466192 IL6STP40189 918 aaPredicted RBP22.23■■□□□ 1.15
COL9A3-205ENST00000466192 TFCP2Q12800 502 aa22.23■■□□□ 1.15
COL9A3-205ENST00000466192 RABEP1Q15276 862 aa22.23■■□□□ 1.15
COL9A3-205ENST00000466192 CICQ96RK0 1608 aaPredicted RBP22.23■■□□□ 1.15
COL9A3-205ENST00000466192 K7ELQ4 463 aaPredicted RBP22.23■■□□□ 1.15
COL9A3-205ENST00000466192 KCNQ2O43526 872 aa22.23■■□□□ 1.15
COL9A3-205ENST00000466192 CHMP5Q9NZZ3 219 aa22.23■■□□□ 1.15
COL9A3-205ENST00000466192 ATP6V1AP38606 617 aa22.22■■□□□ 1.15
COL9A3-205ENST00000466192 RREB1Q92766 1687 aa22.22■■□□□ 1.15
COL9A3-205ENST00000466192 SPATA31A6Q5VVP1 1343 aa22.22■■□□□ 1.15
COL9A3-205ENST00000466192 LOC102724428A0A0B4J2F2 783 aa22.22■■□□□ 1.15
COL9A3-205ENST00000466192 SIK1P57059 783 aa22.22■■□□□ 1.15
COL9A3-205ENST00000466192 PCCAP05165 728 aaPredicted RBP22.21■■□□□ 1.15
COL9A3-205ENST00000466192 TNNI3KQ59H18 835 aa22.21■■□□□ 1.15
COL9A3-205ENST00000466192 INTS5Q6P9B9 1019 aaKnown RBP22.21■■□□□ 1.15
COL9A3-205ENST00000466192 FAM89AQ96GI7 184 aa22.21■■□□□ 1.15
COL9A3-205ENST00000466192 ANO2Q9NQ90 1003 aa22.21■■□□□ 1.15
COL9A3-205ENST00000466192 FPGT-TNNI3KV9GXZ4 949 aa22.21■■□□□ 1.15
COL9A3-205ENST00000466192 HSP90AA1P07900 732 aaKnown RBP22.21■■□□□ 1.15
COL9A3-205ENST00000466192 GPTP24298 496 aa22.21■■□□□ 1.15
COL9A3-205ENST00000466192 CERKQ8TCT0 537 aa22.21■■□□□ 1.15
COL9A3-205ENST00000466192 TBC1D2BQ9UPU7 963 aa22.21■■□□□ 1.15
COL9A3-205ENST00000466192 PALLDQ8WX93 1383 aa22.21■■□□□ 1.15
COL9A3-205ENST00000466192 MYH3P11055 1940 aa22.2■■□□□ 1.14
COL9A3-205ENST00000466192 ITPK1Q13572 414 aa22.2■■□□□ 1.14
COL9A3-205ENST00000466192 ATG9AQ7Z3C6 839 aa22.2■■□□□ 1.14
COL9A3-205ENST00000466192 NLRP10Q86W26 655 aa22.2■■□□□ 1.14
COL9A3-205ENST00000466192 DZIP3Q86Y13 1208 aaKnown RBP22.2■■□□□ 1.14
COL9A3-205ENST00000466192 ZBTB38Q8NAP3 1195 aaPredicted RBP22.2■■□□□ 1.14
COL9A3-205ENST00000466192 HSP90AB3PQ58FF7 597 aa22.19■■□□□ 1.14
COL9A3-205ENST00000466192 USP21Q9UK80 565 aa22.19■■□□□ 1.14
COL9A3-205ENST00000466192 COL5A3P25940 1745 aaPredicted RBP22.19■■□□□ 1.14
COL9A3-205ENST00000466192 PRKCSHP14314 528 aaPredicted RBP22.19■■□□□ 1.14
COL9A3-205ENST00000466192 CRKLP46109 303 aaKnown RBP22.19■■□□□ 1.14
COL9A3-205ENST00000466192 EIF5P55010 431 aaKnown RBP22.19■■□□□ 1.14
COL9A3-205ENST00000466192 FOXD4L1Q9NU39 408 aa22.19■■□□□ 1.14
COL9A3-205ENST00000466192 CCDC87Q9NVE4 849 aa22.19■■□□□ 1.14
COL9A3-205ENST00000466192 DBNLQ9UJU6 430 aaKnown RBP22.19■■□□□ 1.14
COL9A3-205ENST00000466192 ERVV-1B6SEH8 477 aa22.18■■□□□ 1.14
COL9A3-205ENST00000466192 SGSM2O43147 1006 aa22.18■■□□□ 1.14
COL9A3-205ENST00000466192 SYNE4Q8N205 404 aa22.18■■□□□ 1.14
COL9A3-205ENST00000466192 EVI5LQ96CN4 794 aa22.18■■□□□ 1.14
COL9A3-205ENST00000466192 ZNF594Q96JF6 807 aaPredicted RBP22.18■■□□□ 1.14
COL9A3-205ENST00000466192 DDIT3P35638 169 aa22.18■■□□□ 1.14
COL9A3-205ENST00000466192 PLA2G12BQ9BX93 195 aa22.18■■□□□ 1.14
COL9A3-205ENST00000466192 BOLA2Q9H3K6 86 aa22.17■■□□□ 1.14
COL9A3-205ENST00000466192 THSD7AQ9UPZ6 1657 aa22.17■■□□□ 1.14
COL9A3-205ENST00000466192 CWC27Q6UX04 472 aaKnown RBP22.16■■□□□ 1.14
COL9A3-205ENST00000466192 LRRC24Q50LG9 513 aa22.16■■□□□ 1.14
COL9A3-205ENST00000466192 SMARCC1Q92922 1105 aaPredicted RBP22.16■■□□□ 1.14
COL9A3-205ENST00000466192 PALD1Q9ULE6 856 aa22.16■■□□□ 1.14
COL9A3-205ENST00000466192 CDHR2Q9BYE9 1310 aa22.16■■□□□ 1.14
COL9A3-205ENST00000466192 ZNF831Q5JPB2 1677 aa22.15■■□□□ 1.14
COL9A3-205ENST00000466192 EYA2O00167 538 aa22.15■■□□□ 1.14
COL9A3-205ENST00000466192 CSF1RP07333 972 aa22.15■■□□□ 1.14
COL9A3-205ENST00000466192 IL15P40933 162 aaPredicted RBP22.15■■□□□ 1.14
COL9A3-205ENST00000466192 DBNDD2Q9BQY9 259 aa22.15■■□□□ 1.14
COL9A3-205ENST00000466192 DIAPH3Q9NSV4 1193 aa22.15■■□□□ 1.14
COL9A3-205ENST00000466192 EPB41L2O43491 1005 aaKnown RBP22.14■■□□□ 1.13
COL9A3-205ENST00000466192 MCCP23508 829 aa22.14■■□□□ 1.13
COL9A3-205ENST00000466192 ST18O60284 1047 aa22.14■■□□□ 1.13
COL9A3-205ENST00000466192 ATP5JP18859 108 aa22.14■■□□□ 1.13
COL9A3-205ENST00000466192 CCDC57Q2TAC2 916 aa22.14■■□□□ 1.13
COL9A3-205ENST00000466192 ZNF34Q8IZ26 560 aa22.14■■□□□ 1.13
COL9A3-205ENST00000466192 CCDC85AQ96PX6 553 aaPredicted RBP22.14■■□□□ 1.13
COL9A3-205ENST00000466192 PUS3Q9BZE2 481 aaKnown RBP22.14■■□□□ 1.13
COL9A3-205ENST00000466192 UBN2Q6ZU65 1347 aa22.13■■□□□ 1.13
COL9A3-205ENST00000466192 CIAO1O76071 339 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms