RNA–Protein interactions for RNA: ENST00000463029.5

TMEM254-207, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 847 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-207ENST00000463029 SMC1BQ8NDV3 1235 aa10.95□□□□□ -0.66
TMEM254-207ENST00000463029 OCEL1Q9H607 264 aa10.95□□□□□ -0.66
TMEM254-207ENST00000463029 USP16Q9Y5T5 823 aa10.95□□□□□ -0.66
TMEM254-207ENST00000463029 SIPA1L3O60292 1781 aaPredicted RBP10.95□□□□□ -0.66
TMEM254-207ENST00000463029 DLEC1Q9Y238 1755 aa10.95□□□□□ -0.66
TMEM254-207ENST00000463029 PRAMEF22A3QJZ6 481 aa10.94□□□□□ -0.66
TMEM254-207ENST00000463029 SNRPA1P09661 255 aaKnown RBP10.94□□□□□ -0.66
TMEM254-207ENST00000463029 VEGFAP15692 232 aaPredicted RBP10.94□□□□□ -0.66
TMEM254-207ENST00000463029 DCTN1Q14203 1278 aa10.94□□□□□ -0.66
TMEM254-207ENST00000463029 TNRC6CQ9HCJ0 1690 aaKnown RBP10.93□□□□□ -0.66
TMEM254-207ENST00000463029 ERFEQ4G0M1 354 aa10.93□□□□□ -0.66
TMEM254-207ENST00000463029 DPY19L2Q6NUT2 758 aa10.93□□□□□ -0.66
TMEM254-207ENST00000463029 NBPF5PQ86XG9 351 aaPredicted RBP10.93□□□□□ -0.66
TMEM254-207ENST00000463029 ZNF652Q9Y2D9 606 aa10.93□□□□□ -0.66
TMEM254-207ENST00000463029 SBF1O95248 1867 aa10.93□□□□□ -0.66
TMEM254-207ENST00000463029 HTATSF1O43719 755 aaKnown RBP10.92□□□□□ -0.66
TMEM254-207ENST00000463029 SRGNP10124 158 aa10.92□□□□□ -0.66
TMEM254-207ENST00000463029 STYK1Q6J9G0 422 aa10.92□□□□□ -0.66
TMEM254-207ENST00000463029 PRPF40BQ6NWY9 871 aaKnown RBP10.92□□□□□ -0.66
TMEM254-207ENST00000463029 CNKSR1Q969H4 720 aa10.92□□□□□ -0.66
TMEM254-207ENST00000463029 KLRG1Q96E93 195 aa10.92□□□□□ -0.66
TMEM254-207ENST00000463029 MASTLQ96GX5 879 aa10.92□□□□□ -0.66
TMEM254-207ENST00000463029 TAOK3Q9H2K8 898 aa10.92□□□□□ -0.66
TMEM254-207ENST00000463029 WDR90Q96KV7 1748 aa10.92□□□□□ -0.66
TMEM254-207ENST00000463029 ANKRD31Q8N7Z5 1873 aa10.91□□□□□ -0.66
TMEM254-207ENST00000463029 NBPF26B4DH59 902 aa10.91□□□□□ -0.66
TMEM254-207ENST00000463029 STK25O00506 426 aa10.91□□□□□ -0.66
TMEM254-207ENST00000463029 NBPF10Q6P3W6 841 aaKnown RBP10.91□□□□□ -0.66
TMEM254-207ENST00000463029 CLEC4GQ6UXB4 293 aa10.91□□□□□ -0.66
TMEM254-207ENST00000463029 NBPF15Q8N660 670 aa10.91□□□□□ -0.66
TMEM254-207ENST00000463029 MIS18AQ9NYP9 233 aa10.91□□□□□ -0.66
TMEM254-207ENST00000463029 STK24Q9Y6E0 443 aa10.91□□□□□ -0.66
TMEM254-207ENST00000463029 COL11A2P13942 1736 aaPredicted RBP10.91□□□□□ -0.66
TMEM254-207ENST00000463029 TIAM2Q8IVF5 1701 aa10.9□□□□□ -0.66
TMEM254-207ENST00000463029 FAM177BA6PVY3 158 aa10.9□□□□□ -0.66
TMEM254-207ENST00000463029 NEFMP07197 916 aa10.9□□□□□ -0.66
TMEM254-207ENST00000463029 TAF7Q15545 349 aaPredicted RBP10.9□□□□□ -0.66
TMEM254-207ENST00000463029 SOGA3Q5TF21 947 aa10.9□□□□□ -0.66
TMEM254-207ENST00000463029 NIP7Q9Y221 180 aaKnown RBP eCLIP10.9□□□□□ -0.66
TMEM254-207ENST00000463029 LTBP3Q9NS15 1303 aa10.89□□□□□ -0.67
TMEM254-207ENST00000463029 TPTE2Q6XPS3 522 aa10.89□□□□□ -0.67
TMEM254-207ENST00000463029 BCORQ6W2J9 1755 aa10.88□□□□□ -0.67
TMEM254-207ENST00000463029 POTECB2RU33 542 aa10.88□□□□□ -0.67
TMEM254-207ENST00000463029 NPR1P16066 1061 aa10.88□□□□□ -0.67
TMEM254-207ENST00000463029 GTF2E1P29083 439 aaPredicted RBP10.88□□□□□ -0.67
TMEM254-207ENST00000463029 NGEFQ8N5V2 710 aa10.88□□□□□ -0.67
TMEM254-207ENST00000463029 JMYQ8N9B5 988 aa10.88□□□□□ -0.67
TMEM254-207ENST00000463029 MS4A4AQ96JQ5 239 aa10.88□□□□□ -0.67
TMEM254-207ENST00000463029 DDNO94850 711 aaPredicted RBP10.87□□□□□ -0.67
TMEM254-207ENST00000463029 HLFQ16534 295 aa10.87□□□□□ -0.67
TMEM254-207ENST00000463029 CCDC93Q567U6 631 aa10.87□□□□□ -0.67
TMEM254-207ENST00000463029 PNISRQ8TF01 805 aaKnown RBP10.87□□□□□ -0.67
TMEM254-207ENST00000463029 THUMPD2Q9BTF0 503 aaKnown RBP10.87□□□□□ -0.67
TMEM254-207ENST00000463029 MAPK8IP3Q9UPT6 1336 aa10.86□□□□□ -0.67
TMEM254-207ENST00000463029 SLX4Q8IY92 1834 aa10.86□□□□□ -0.67
TMEM254-207ENST00000463029 OLFM4Q6UX06 510 aa10.86□□□□□ -0.67
TMEM254-207ENST00000463029 C7orf43Q8WVR3 580 aa10.86□□□□□ -0.67
TMEM254-207ENST00000463029 RTN4Q9NQC3 1192 aaKnown RBP10.86□□□□□ -0.67
TMEM254-207ENST00000463029 ZNF277Q9NRM2 450 aaPredicted RBP10.86□□□□□ -0.67
TMEM254-207ENST00000463029 RRP7AQ9Y3A4 280 aaKnown RBP10.86□□□□□ -0.67
TMEM254-207ENST00000463029 FER1L6Q2WGJ9 1857 aa10.85□□□□□ -0.67
TMEM254-207ENST00000463029 CCDC88AQ3V6T2 1871 aa10.85□□□□□ -0.67
TMEM254-207ENST00000463029 KLRG2A4D1S0 409 aaPredicted RBP10.85□□□□□ -0.67
TMEM254-207ENST00000463029 EIF4A1P60842 406 aaKnown RBP10.85□□□□□ -0.67
TMEM254-207ENST00000463029 FKBP4Q02790 459 aaKnown RBP eCLIP10.85□□□□□ -0.67
TMEM254-207ENST00000463029 NFE2L2Q16236 605 aa10.85□□□□□ -0.67
TMEM254-207ENST00000463029 KIF6Q6ZMV9 814 aa10.85□□□□□ -0.67
TMEM254-207ENST00000463029 PLEKHF1Q96S99 279 aa10.85□□□□□ -0.67
TMEM254-207ENST00000463029 MYL6BP14649 208 aa10.84□□□□□ -0.67
TMEM254-207ENST00000463029 ALDH1B1P30837 517 aa10.84□□□□□ -0.67
TMEM254-207ENST00000463029 TTLL7Q6ZT98 887 aa10.84□□□□□ -0.67
TMEM254-207ENST00000463029 NUTM1Q86Y26 1132 aa10.84□□□□□ -0.67
TMEM254-207ENST00000463029 RTKN2Q8IZC4 609 aa10.84□□□□□ -0.67
TMEM254-207ENST00000463029 NYXQ9GZU5 481 aa10.84□□□□□ -0.67
TMEM254-207ENST00000463029 MAP3K15Q6ZN16 1313 aa10.84□□□□□ -0.67
TMEM254-207ENST00000463029 CACNA1SQ13698 1873 aa10.83□□□□□ -0.68
TMEM254-207ENST00000463029 ABCC12Q96J65 1359 aa10.83□□□□□ -0.68
TMEM254-207ENST00000463029 IQCA1LA6NCM1 817 aa10.83□□□□□ -0.68
TMEM254-207ENST00000463029 ERVV-1B6SEH8 477 aa10.83□□□□□ -0.68
TMEM254-207ENST00000463029 GPTP24298 496 aa10.83□□□□□ -0.68
TMEM254-207ENST00000463029 COL13A1Q5TAT6 717 aaPredicted RBP10.83□□□□□ -0.68
TMEM254-207ENST00000463029 FBXO22Q8NEZ5 403 aa10.83□□□□□ -0.68
TMEM254-207ENST00000463029 MFRPQ9BY79 579 aa10.83□□□□□ -0.68
TMEM254-207ENST00000463029 PNNQ9H307 717 aaKnown RBP10.83□□□□□ -0.68
TMEM254-207ENST00000463029 ZBTB3Q9H5J0 574 aa10.83□□□□□ -0.68
TMEM254-207ENST00000463029 SCUBE2Q9NQ36 999 aa10.83□□□□□ -0.68
TMEM254-207ENST00000463029 ZNF541Q9H0D2 1346 aa10.83□□□□□ -0.68
TMEM254-207ENST00000463029 ARFGEF2Q9Y6D5 1785 aa10.82□□□□□ -0.68
TMEM254-207ENST00000463029 PCNTO95613 3336 aa10.82□□□□□ -0.68
TMEM254-207ENST00000463029 IARSP41252 1262 aaKnown RBP10.82□□□□□ -0.68
TMEM254-207ENST00000463029 MAMSTRQ6ZN01 415 aa10.82□□□□□ -0.68
TMEM254-207ENST00000463029 SYNE4Q8N205 404 aa10.82□□□□□ -0.68
TMEM254-207ENST00000463029 L3MBTL3Q96JM7 780 aaPredicted RBP10.82□□□□□ -0.68
TMEM254-207ENST00000463029 TAF1DQ9H5J8 278 aaPredicted RBP10.82□□□□□ -0.68
TMEM254-207ENST00000463029 TAOK2Q9UL54 1235 aa10.82□□□□□ -0.68
TMEM254-207ENST00000463029 LAMB4A4D0S4 1761 aa10.82□□□□□ -0.68
TMEM254-207ENST00000463029 DICER1Q9UPY3 1922 aaKnown RBP10.82□□□□□ -0.68
TMEM254-207ENST00000463029 KDM3BQ7LBC6 1761 aa10.81□□□□□ -0.68
TMEM254-207ENST00000463029 HSPA1AP0DMV8 641 aaKnown RBP10.81□□□□□ -0.68
TMEM254-207ENST00000463029 HSPA1BP0DMV9 641 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms