RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, human

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH23-208	ENST00000461841	SIK1	P57059	783 aa		31.19	■■■□□ 2.58
CDH23-208	ENST00000461841	BECN1	Q14457	450 aa		31.19	■■■□□ 2.58
CDH23-208	ENST00000461841	ANP32E	Q9BTT0	268 aa		31.19	■■■□□ 2.58
CDH23-208	ENST00000461841	ATP6V1A	P38606	617 aa		31.19	■■■□□ 2.58
CDH23-208	ENST00000461841	IL6ST	P40189	918 aa	Predicted RBP	31.19	■■■□□ 2.58
CDH23-208	ENST00000461841	RILPL2	Q969X0	211 aa		31.18	■■■□□ 2.58
CDH23-208	ENST00000461841	HLF	Q16534	295 aa		31.17	■■■□□ 2.58
CDH23-208	ENST00000461841	TTC41P	Q6P2S7	1318 aa		31.17	■■■□□ 2.58
CDH23-208	ENST00000461841	PALLD	Q8WX93	1383 aa		31.16	■■■□□ 2.58
CDH23-208	ENST00000461841	IFIT2	P09913	472 aa	Known RBP	31.15	■■■□□ 2.58
CDH23-208	ENST00000461841	INTS5	Q6P9B9	1019 aa	Known RBP	31.15	■■■□□ 2.58
CDH23-208	ENST00000461841	AACS	Q86V21	672 aa		31.15	■■■□□ 2.58
CDH23-208	ENST00000461841	EAF2	Q96CJ1	260 aa	Predicted RBP	31.15	■■■□□ 2.58
CDH23-208	ENST00000461841	MYT1	Q01538	1121 aa		31.14	■■■□□ 2.58
CDH23-208	ENST00000461841	ITPK1	Q13572	414 aa		31.14	■■■□□ 2.58
CDH23-208	ENST00000461841	MEX3C	Q5U5Q3	659 aa	Known RBP	31.14	■■■□□ 2.58
CDH23-208	ENST00000461841	SMARCC1	Q92922	1105 aa	Predicted RBP	31.14	■■■□□ 2.58
CDH23-208	ENST00000461841	KIF2C	Q99661	725 aa		31.14	■■■□□ 2.58
CDH23-208	ENST00000461841	USP26	Q9BXU7	913 aa		31.14	■■■□□ 2.58
CDH23-208	ENST00000461841	TBC1D2	Q9BYX2	928 aa		31.14	■■■□□ 2.57
CDH23-208	ENST00000461841	ECHDC1	Q9NTX5	307 aa		31.13	■■■□□ 2.57
CDH23-208	ENST00000461841	CCDC87	Q9NVE4	849 aa		31.13	■■■□□ 2.57
CDH23-208	ENST00000461841	ERC2	O15083	957 aa		31.12	■■■□□ 2.57
CDH23-208	ENST00000461841	CHML	P26374	656 aa		31.12	■■■□□ 2.57
CDH23-208	ENST00000461841	CRKL	P46109	303 aa	Known RBP	31.12	■■■□□ 2.57
CDH23-208	ENST00000461841	EIF5	P55010	431 aa	Known RBP	31.12	■■■□□ 2.57
CDH23-208	ENST00000461841	TBC1D2B	Q9UPU7	963 aa		31.12	■■■□□ 2.57
CDH23-208	ENST00000461841	ERVV-1	B6SEH8	477 aa		31.12	■■■□□ 2.57
CDH23-208	ENST00000461841	GLRX3	O76003	335 aa	Known RBP	31.12	■■■□□ 2.57
CDH23-208	ENST00000461841	HSP90AB3P	Q58FF7	597 aa		31.12	■■■□□ 2.57
CDH23-208	ENST00000461841	DZIP3	Q86Y13	1208 aa	Known RBP	31.12	■■■□□ 2.57
CDH23-208	ENST00000461841	CHMP3	Q9Y3E7	222 aa		31.12	■■■□□ 2.57
CDH23-208	ENST00000461841	PCCA	P05165	728 aa	Predicted RBP	31.11	■■■□□ 2.57
CDH23-208	ENST00000461841	REC8	O95072	547 aa		31.1	■■■□□ 2.57
CDH23-208	ENST00000461841	MAP4K4	O95819	1239 aa	Predicted RBP	31.1	■■■□□ 2.57
CDH23-208	ENST00000461841	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	31.1	■■■□□ 2.57
CDH23-208	ENST00000461841	GPATCH3	Q96I76	525 aa		31.1	■■■□□ 2.57
CDH23-208	ENST00000461841	CIC	Q96RK0	1608 aa	Predicted RBP	31.1	■■■□□ 2.57
CDH23-208	ENST00000461841	NLRP10	Q86W26	655 aa		31.1	■■■□□ 2.57
CDH23-208	ENST00000461841	FAM89A	Q96GI7	184 aa		31.1	■■■□□ 2.57
CDH23-208	ENST00000461841	THSD7A	Q9UPZ6	1657 aa		31.1	■■■□□ 2.57
CDH23-208	ENST00000461841	CCDC8	Q9H0W5	538 aa	Predicted RBP	31.09	■■■□□ 2.57
CDH23-208	ENST00000461841	GPT	P24298	496 aa		31.08	■■■□□ 2.57
CDH23-208	ENST00000461841	GJD4	Q96KN9	370 aa	Predicted RBP	31.08	■■■□□ 2.57
CDH23-208	ENST00000461841	ESYT1	Q9BSJ8	1104 aa		31.08	■■■□□ 2.57
CDH23-208	ENST00000461841	AFF2	P51816	1311 aa		31.08	■■■□□ 2.57
CDH23-208	ENST00000461841	TFCP2	Q12800	502 aa		31.07	■■■□□ 2.56
CDH23-208	ENST00000461841	TLR7	Q9NYK1	1049 aa	Known RBP	31.07	■■■□□ 2.56
CDH23-208	ENST00000461841	NUP98	P52948	1817 aa		31.06	■■■□□ 2.56
CDH23-208	ENST00000461841	CNTROB	Q8N137	903 aa		31.06	■■■□□ 2.56
CDH23-208	ENST00000461841	PTF1A	Q7RTS3	328 aa		31.05	■■■□□ 2.56
CDH23-208	ENST00000461841	PLA2G12B	Q9BX93	195 aa		31.05	■■■□□ 2.56
CDH23-208	ENST00000461841	MYH14	Q7Z406	1995 aa	Known RBP	31.05	■■■□□ 2.56
CDH23-208	ENST00000461841	RREB1	Q92766	1687 aa		31.05	■■■□□ 2.56
CDH23-208	ENST00000461841	ANKRD36C	Q5JPF3	1778 aa		31.04	■■■□□ 2.56
CDH23-208	ENST00000461841	AK9	Q5TCS8	1911 aa		31.04	■■■□□ 2.56
CDH23-208	ENST00000461841	ATG9A	Q7Z3C6	839 aa		31.03	■■■□□ 2.56
CDH23-208	ENST00000461841	SYNE4	Q8N205	404 aa		31.03	■■■□□ 2.56
CDH23-208	ENST00000461841	TNNI3K	Q59H18	835 aa		31.03	■■■□□ 2.56
CDH23-208	ENST00000461841	FPGT-TNNI3K	V9GXZ4	949 aa		31.03	■■■□□ 2.56
CDH23-208	ENST00000461841	CDHR2	Q9BYE9	1310 aa		31.03	■■■□□ 2.56
CDH23-208	ENST00000461841	ZNF34	Q8IZ26	560 aa		31.02	■■■□□ 2.56
CDH23-208	ENST00000461841	CSF1R	P07333	972 aa		31.01	■■■□□ 2.55
CDH23-208	ENST00000461841	FAM182B	Q5T319	152 aa		31.01	■■■□□ 2.55
CDH23-208	ENST00000461841	SNX21	Q969T3	373 aa		31.01	■■■□□ 2.55
CDH23-208	ENST00000461841	ZNF831	Q5JPB2	1677 aa		31.01	■■■□□ 2.55
CDH23-208	ENST00000461841	ONECUT3	O60422	494 aa	Predicted RBP	31	■■■□□ 2.55
CDH23-208	ENST00000461841	ZNF594	Q96JF6	807 aa	Predicted RBP	31	■■■□□ 2.55
CDH23-208	ENST00000461841	UBN2	Q6ZU65	1347 aa		31	■■■□□ 2.55
CDH23-208	ENST00000461841	TRMT112	Q9UI30	125 aa	Known RBP	30.99	■■■□□ 2.55
CDH23-208	ENST00000461841	DBNL	Q9UJU6	430 aa	Known RBP	30.99	■■■□□ 2.55
CDH23-208	ENST00000461841	COL5A3	P25940	1745 aa	Predicted RBP	30.99	■■■□□ 2.55
CDH23-208	ENST00000461841	ATRN	O75882	1429 aa		30.98	■■■□□ 2.55
CDH23-208	ENST00000461841	EYA2	O00167	538 aa		30.98	■■■□□ 2.55
CDH23-208	ENST00000461841	IL15	P40933	162 aa	Predicted RBP	30.98	■■■□□ 2.55
CDH23-208	ENST00000461841	CCDC57	Q2TAC2	916 aa		30.98	■■■□□ 2.55
CDH23-208	ENST00000461841	IL25	Q9H293	177 aa		30.98	■■■□□ 2.55
CDH23-208	ENST00000461841	TRPC5	Q9UL62	973 aa	Predicted RBP	30.98	■■■□□ 2.55
CDH23-208	ENST00000461841	CAMTA2	O94983	1202 aa		30.97	■■■□□ 2.55
CDH23-208	ENST00000461841	LRRC24	Q50LG9	513 aa		30.97	■■■□□ 2.55
CDH23-208	ENST00000461841	LINC00116	Q8NCU8	138 aa		30.97	■■■□□ 2.55
CDH23-208	ENST00000461841	CIAO1	O76071	339 aa		30.97	■■■□□ 2.55
CDH23-208	ENST00000461841	HSCB	Q8IWL3	235 aa		30.97	■■■□□ 2.55
CDH23-208	ENST00000461841	EVI5L	Q96CN4	794 aa		30.97	■■■□□ 2.55
CDH23-208	ENST00000461841	KCNQ4	P56696	695 aa		30.96	■■■□□ 2.55
CDH23-208	ENST00000461841	CCDC85A	Q96PX6	553 aa	Predicted RBP	30.95	■■■□□ 2.55
CDH23-208	ENST00000461841	IRS4	O14654	1257 aa	Predicted RBP	30.95	■■■□□ 2.54
CDH23-208	ENST00000461841	PUS3	Q9BZE2	481 aa	Known RBP	30.95	■■■□□ 2.54
CDH23-208	ENST00000461841	BOLA2	Q9H3K6	86 aa		30.95	■■■□□ 2.54
CDH23-208	ENST00000461841	ANO2	Q9NQ90	1003 aa		30.95	■■■□□ 2.54
CDH23-208	ENST00000461841	TTLL11	Q8NHH1	800 aa		30.94	■■■□□ 2.54
CDH23-208	ENST00000461841	GPR108	Q9NPR9	543 aa		30.94	■■■□□ 2.54
CDH23-208	ENST00000461841	SGSM2	O43147	1006 aa		30.93	■■■□□ 2.54
CDH23-208	ENST00000461841	RABEP1	Q15276	862 aa		30.93	■■■□□ 2.54
CDH23-208	ENST00000461841	BTAF1	O14981	1849 aa		30.93	■■■□□ 2.54
CDH23-208	ENST00000461841	ATP5J	P18859	108 aa		30.93	■■■□□ 2.54
CDH23-208	ENST00000461841	IFIT5	Q13325	482 aa	Known RBP	30.93	■■■□□ 2.54
CDH23-208	ENST00000461841	DBNDD2	Q9BQY9	259 aa		30.93	■■■□□ 2.54
CDH23-208	ENST00000461841	NHS	Q6T4R5	1651 aa		30.93	■■■□□ 2.54
CDH23-208	ENST00000461841	CD2BP2	O95400	341 aa	Known RBP	30.92	■■■□□ 2.54

Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms