RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TTLL7Q6ZT98 887 aa12.76□□□□□ -0.37
HERC4-207ENST00000460168 FAM43BQ6ZT52 329 aaPredicted RBP12.76□□□□□ -0.37
HERC4-207ENST00000460168 ANP32BQ92688 251 aaKnown RBP12.76□□□□□ -0.37
HERC4-207ENST00000460168 UTP14CQ5TAP6 766 aaKnown RBP12.75□□□□□ -0.37
HERC4-207ENST00000460168 ZBTB3Q9H5J0 574 aa12.75□□□□□ -0.37
HERC4-207ENST00000460168 PALLDQ8WX93 1383 aa12.75□□□□□ -0.37
HERC4-207ENST00000460168 AFDNP55196 1824 aaKnown RBP12.75□□□□□ -0.37
HERC4-207ENST00000460168 ATRNO75882 1429 aa12.75□□□□□ -0.37
HERC4-207ENST00000460168 ATP5J2-PTCD1G3V325 749 aa12.74□□□□□ -0.37
HERC4-207ENST00000460168 SRGAP3O43295 1099 aa12.74□□□□□ -0.37
HERC4-207ENST00000460168 CYP19A1P11511 503 aaPredicted RBP12.74□□□□□ -0.37
HERC4-207ENST00000460168 ATP6V1AP38606 617 aa12.74□□□□□ -0.37
HERC4-207ENST00000460168 GCKRQ14397 625 aa12.74□□□□□ -0.37
HERC4-207ENST00000460168 PPP1R42Q7Z4L9 355 aa12.74□□□□□ -0.37
HERC4-207ENST00000460168 SMARCC1Q92922 1105 aaPredicted RBP12.74□□□□□ -0.37
HERC4-207ENST00000460168 QTRT2Q9H974 415 aaKnown RBP12.74□□□□□ -0.37
HERC4-207ENST00000460168 EXOC6BQ9Y2D4 811 aa12.74□□□□□ -0.37
HERC4-207ENST00000460168 LOC102724428A0A0B4J2F2 783 aa12.74□□□□□ -0.37
HERC4-207ENST00000460168 SIK1P57059 783 aa12.74□□□□□ -0.37
HERC4-207ENST00000460168 KIF6Q6ZMV9 814 aa12.74□□□□□ -0.37
HERC4-207ENST00000460168 TJP1Q07157 1748 aa12.74□□□□□ -0.37
HERC4-207ENST00000460168 C8orf34Q49A92 452 aa12.73□□□□□ -0.37
HERC4-207ENST00000460168 FAM182BQ5T319 152 aa12.73□□□□□ -0.37
HERC4-207ENST00000460168 SSH3Q8TE77 659 aa12.73□□□□□ -0.37
HERC4-207ENST00000460168 ZBTB1Q9Y2K1 713 aa12.73□□□□□ -0.37
HERC4-207ENST00000460168 UTYO14607 1347 aa12.73□□□□□ -0.37
HERC4-207ENST00000460168 NUP188Q5SRE5 1749 aa12.73□□□□□ -0.37
HERC4-207ENST00000460168 AXDND1Q5T1B0 1012 aaPredicted RBP12.73□□□□□ -0.37
HERC4-207ENST00000460168 IBTKQ9P2D0 1353 aaPredicted RBP12.73□□□□□ -0.37
HERC4-207ENST00000460168 SEPT12Q8IYM1 358 aa12.72□□□□□ -0.37
HERC4-207ENST00000460168 SUCLG2Q96I99 432 aa12.72□□□□□ -0.37
HERC4-207ENST00000460168 A0A087WZG4 1122 aa12.72□□□□□ -0.37
HERC4-207ENST00000460168 UBE3BQ7Z3V4 1068 aa12.72□□□□□ -0.37
HERC4-207ENST00000460168 BICC1Q9H694 974 aaKnown RBP12.72□□□□□ -0.37
HERC4-207ENST00000460168 SMARCA5O60264 1052 aaPredicted RBP12.71□□□□□ -0.37
HERC4-207ENST00000460168 ONECUT3O60422 494 aaPredicted RBP12.71□□□□□ -0.37
HERC4-207ENST00000460168 PHF14O94880 888 aa12.71□□□□□ -0.37
HERC4-207ENST00000460168 PTMSP20962 102 aa12.71□□□□□ -0.37
HERC4-207ENST00000460168 MTX1Q13505 466 aa12.71□□□□□ -0.37
HERC4-207ENST00000460168 POLA2Q14181 598 aa12.71□□□□□ -0.37
HERC4-207ENST00000460168 LRRCC1Q9C099 1032 aa12.71□□□□□ -0.37
HERC4-207ENST00000460168 SURF6O75683 361 aaKnown RBP12.7□□□□□ -0.38
HERC4-207ENST00000460168 PSMD1Q99460 953 aa12.7□□□□□ -0.38
HERC4-207ENST00000460168 CWC25Q9NXE8 425 aaPredicted RBP12.7□□□□□ -0.38
HERC4-207ENST00000460168 IL6STP40189 918 aaPredicted RBP12.7□□□□□ -0.38
HERC4-207ENST00000460168 CRKLP46109 303 aaKnown RBP12.7□□□□□ -0.38
HERC4-207ENST00000460168 JARID2Q92833 1246 aaPredicted RBP12.7□□□□□ -0.38
HERC4-207ENST00000460168 RRAGDQ9NQL2 400 aaPredicted RBP12.7□□□□□ -0.38
HERC4-207ENST00000460168 CCDC87Q9NVE4 849 aa12.7□□□□□ -0.38
HERC4-207ENST00000460168 MAP3K15Q6ZN16 1313 aa12.69□□□□□ -0.38
HERC4-207ENST00000460168 ITPK1Q13572 414 aa12.69□□□□□ -0.38
HERC4-207ENST00000460168 CCDC191Q8NCU4 936 aa12.69□□□□□ -0.38
HERC4-207ENST00000460168 KAZALD1Q96I82 304 aa12.69□□□□□ -0.38
HERC4-207ENST00000460168 PATL2C9JE40 543 aaKnown RBP12.69□□□□□ -0.38
HERC4-207ENST00000460168 TCIRG1Q13488 830 aa12.69□□□□□ -0.38
HERC4-207ENST00000460168 PTF1AQ7RTS3 328 aa12.69□□□□□ -0.38
HERC4-207ENST00000460168 C16orf71Q8IYS4 520 aaPredicted RBP12.69□□□□□ -0.38
HERC4-207ENST00000460168 DDRGK1Q96HY6 314 aa12.69□□□□□ -0.38
HERC4-207ENST00000460168 NHSQ6T4R5 1651 aa12.68□□□□□ -0.38
HERC4-207ENST00000460168 EP400Q96L91 3159 aa12.68□□□□□ -0.38
HERC4-207ENST00000460168 PSEN1P49768 467 aa12.68□□□□□ -0.38
HERC4-207ENST00000460168 OS9Q13438 667 aaPredicted RBP12.68□□□□□ -0.38
HERC4-207ENST00000460168 HSP90AB4PQ58FF6 505 aa12.68□□□□□ -0.38
HERC4-207ENST00000460168 DZIP3Q86Y13 1208 aaKnown RBP12.68□□□□□ -0.38
HERC4-207ENST00000460168 PLEKHM2Q8IWE5 1019 aa12.68□□□□□ -0.38
HERC4-207ENST00000460168 CICQ96RK0 1608 aaPredicted RBP12.68□□□□□ -0.38
HERC4-207ENST00000460168 BTAF1O14981 1849 aa12.68□□□□□ -0.38
HERC4-207ENST00000460168 RAB11FIP3O75154 756 aa12.68□□□□□ -0.38
HERC4-207ENST00000460168 SETQ01105 290 aaPredicted RBP12.68□□□□□ -0.38
HERC4-207ENST00000460168 BMP2KLQ5H9B9 411 aa12.68□□□□□ -0.38
HERC4-207ENST00000460168 INTS5Q6P9B9 1019 aaKnown RBP12.68□□□□□ -0.38
HERC4-207ENST00000460168 GIGYF2Q6Y7W6 1299 aaKnown RBP12.68□□□□□ -0.38
HERC4-207ENST00000460168 TBC1D2BQ9UPU7 963 aa12.68□□□□□ -0.38
HERC4-207ENST00000460168 HSP90AB3PQ58FF7 597 aa12.67□□□□□ -0.38
HERC4-207ENST00000460168 OTUD7AQ8TE49 926 aaPredicted RBP12.67□□□□□ -0.38
HERC4-207ENST00000460168 VGLL3A8MV65 326 aa12.66□□□□□ -0.38
HERC4-207ENST00000460168 TPM2P07951 284 aa12.66□□□□□ -0.38
HERC4-207ENST00000460168 ANP32AP39687 249 aaKnown RBP12.66□□□□□ -0.38
HERC4-207ENST00000460168 EIF5P55010 431 aaKnown RBP12.66□□□□□ -0.38
HERC4-207ENST00000460168 HLFQ16534 295 aa12.66□□□□□ -0.38
HERC4-207ENST00000460168 EPHA10Q5JZY3 1008 aa12.66□□□□□ -0.38
HERC4-207ENST00000460168 ZNF772Q68DY9 489 aaPredicted RBP12.66□□□□□ -0.38
HERC4-207ENST00000460168 KIF1BPQ96EK5 621 aa12.66□□□□□ -0.38
HERC4-207ENST00000460168 ISCA1Q9BUE6 129 aa12.66□□□□□ -0.38
HERC4-207ENST00000460168 H7C1W4 665 aa12.66□□□□□ -0.38
HERC4-207ENST00000460168 KCNQ4P56696 695 aa12.66□□□□□ -0.38
HERC4-207ENST00000460168 RHPN1Q8TCX5 695 aa12.66□□□□□ -0.38
HERC4-207ENST00000460168 IL1RAPL2Q9NP60 686 aa12.66□□□□□ -0.38
HERC4-207ENST00000460168 PA2G4Q9UQ80 394 aaKnown RBP12.66□□□□□ -0.38
HERC4-207ENST00000460168 COL15A1P39059 1388 aa12.66□□□□□ -0.38
HERC4-207ENST00000460168 COL5A3P25940 1745 aaPredicted RBP12.66□□□□□ -0.38
HERC4-207ENST00000460168 ZNF831Q5JPB2 1677 aa12.65□□□□□ -0.38
HERC4-207ENST00000460168 ERVV-1B6SEH8 477 aa12.65□□□□□ -0.38
HERC4-207ENST00000460168 CLCN1P35523 988 aa12.65□□□□□ -0.38
HERC4-207ENST00000460168 CASP7P55210 303 aa12.65□□□□□ -0.38
HERC4-207ENST00000460168 PPP4R3BQ5MIZ7 849 aa12.65□□□□□ -0.38
HERC4-207ENST00000460168 MYH14Q7Z406 1995 aaKnown RBP12.65□□□□□ -0.38
HERC4-207ENST00000460168 GPTP24298 496 aa12.65□□□□□ -0.38
HERC4-207ENST00000460168 TRIM28Q13263 835 aaKnown RBP12.65□□□□□ -0.38
HERC4-207ENST00000460168 CHMP3Q9Y3E7 222 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms