RNA–Protein interactions for RNA: ENST00000450198.6

SMARCA2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-214ENST00000450198 GBP3Q9H0R5 595 aa16.63■□□□□ 0.25
SMARCA2-214ENST00000450198 ECM2O94769 699 aaPredicted RBP16.63■□□□□ 0.25
SMARCA2-214ENST00000450198 KLHL10Q6JEL2 608 aa16.63■□□□□ 0.25
SMARCA2-214ENST00000450198 MCM10Q7L590 875 aa16.63■□□□□ 0.25
SMARCA2-214ENST00000450198 IFFO1Q0D2I5 559 aa16.63■□□□□ 0.25
SMARCA2-214ENST00000450198 TMEM67Q5HYA8 995 aa16.63■□□□□ 0.25
SMARCA2-214ENST00000450198 CEP63Q96MT8 703 aa16.63■□□□□ 0.25
SMARCA2-214ENST00000450198 PAFAH1B1P43034 410 aa16.62■□□□□ 0.25
SMARCA2-214ENST00000450198 PICALMQ13492 652 aa16.62■□□□□ 0.25
SMARCA2-214ENST00000450198 SMARCA4P51532 1647 aa16.62■□□□□ 0.25
SMARCA2-214ENST00000450198 MX1P20591 662 aa16.62■□□□□ 0.25
SMARCA2-214ENST00000450198 CHRNA2Q15822 529 aa16.62■□□□□ 0.25
SMARCA2-214ENST00000450198 MTERF4Q7Z6M4 381 aaKnown RBP16.62■□□□□ 0.25
SMARCA2-214ENST00000450198 RBM17Q96I25 401 aaKnown RBP16.62■□□□□ 0.25
SMARCA2-214ENST00000450198 MIS18AQ9NYP9 233 aa16.62■□□□□ 0.25
SMARCA2-214ENST00000450198 CASKIN1Q8WXD9 1431 aa16.62■□□□□ 0.25
SMARCA2-214ENST00000450198 WASLO00401 505 aaPredicted RBP16.62■□□□□ 0.25
SMARCA2-214ENST00000450198 TTC12Q9H892 705 aaPredicted RBP16.62■□□□□ 0.25
SMARCA2-214ENST00000450198 YEATS4O95619 227 aa16.61■□□□□ 0.25
SMARCA2-214ENST00000450198 GOPCQ9HD26 462 aa16.61■□□□□ 0.25
SMARCA2-214ENST00000450198 NIP7Q9Y221 180 aaKnown RBP eCLIP16.61■□□□□ 0.25
SMARCA2-214ENST00000450198 WWC3Q9ULE0 1092 aa16.61■□□□□ 0.25
SMARCA2-214ENST00000450198 CBX1P83916 185 aa16.61■□□□□ 0.25
SMARCA2-214ENST00000450198 PODXL2Q9NZ53 605 aa16.61■□□□□ 0.25
SMARCA2-214ENST00000450198 IARSP41252 1262 aaKnown RBP16.6■□□□□ 0.25
SMARCA2-214ENST00000450198 UQCRHLA0A096LP55 91 aa16.6■□□□□ 0.25
SMARCA2-214ENST00000450198 K7ELQ4 463 aaPredicted RBP16.6■□□□□ 0.25
SMARCA2-214ENST00000450198 MCM3P25205 808 aa16.6■□□□□ 0.25
SMARCA2-214ENST00000450198 SH2B1Q9NRF2 756 aaPredicted RBP16.6■□□□□ 0.25
SMARCA2-214ENST00000450198 ANKRD2Q9GZV1 360 aa16.6■□□□□ 0.25
SMARCA2-214ENST00000450198 SPDYE3A6NKU9 549 aa16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 TNNT1P13805 278 aa16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 TRAPPC3LQ5T215 181 aa16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 PRPF40BQ6NWY9 871 aaKnown RBP16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 CCDC83Q8IWF9 413 aa16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 IFI16Q16666 785 aaKnown RBP16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 NBPF1Q3BBV0 1214 aa16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 CCDC14Q49A88 953 aa16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 NAA15Q9BXJ9 866 aaKnown RBP16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 SPC25Q9HBM1 224 aa16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 EXOC6BQ9Y2D4 811 aa16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 SNX16P57768 344 aa16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 PPP1R14CQ8TAE6 165 aa16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 CRACR2AQ9BSW2 395 aa16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 CDCA7Q9BWT1 371 aaPredicted RBP16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 TMTC2Q8N394 836 aa16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 KRT23Q9C075 422 aa16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 CCDC8Q9H0W5 538 aaPredicted RBP16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 TROQ12816 1431 aaPredicted RBP16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 PRKCSHP14314 528 aaPredicted RBP16.59■□□□□ 0.25
SMARCA2-214ENST00000450198 ZSCAN12O43309 604 aa16.58■□□□□ 0.25
SMARCA2-214ENST00000450198 UBE4AQ14139 1066 aa16.58■□□□□ 0.25
SMARCA2-214ENST00000450198 KIAA1524Q8TCG1 905 aa16.58■□□□□ 0.25
SMARCA2-214ENST00000450198 CCDC66A2RUB6 948 aa16.58■□□□□ 0.24
SMARCA2-214ENST00000450198 NAA16Q6N069 864 aaPredicted RBP16.58■□□□□ 0.24
SMARCA2-214ENST00000450198 SUPT20HQ8NEM7 779 aa16.58■□□□□ 0.24
SMARCA2-214ENST00000450198 SLC5A4Q9NY91 659 aa16.58■□□□□ 0.24
SMARCA2-214ENST00000450198 TMCO5BA8MYB1 307 aa16.58■□□□□ 0.24
SMARCA2-214ENST00000450198 CYP7A1P22680 504 aa16.58■□□□□ 0.24
SMARCA2-214ENST00000450198 TMPOP42166 694 aaKnown RBP16.58■□□□□ 0.24
SMARCA2-214ENST00000450198 SLC8A3P57103 927 aa16.58■□□□□ 0.24
SMARCA2-214ENST00000450198 EP400NLQ6ZTU2 488 aa16.58■□□□□ 0.24
SMARCA2-214ENST00000450198 ANO10Q9NW15 660 aa16.58■□□□□ 0.24
SMARCA2-214ENST00000450198 SH3BP5O60239 455 aa16.58■□□□□ 0.24
SMARCA2-214ENST00000450198 MAP9Q49MG5 647 aa16.58■□□□□ 0.24
SMARCA2-214ENST00000450198 CNNM3Q8NE01 707 aa16.58■□□□□ 0.24
SMARCA2-214ENST00000450198 KIF5CO60282 957 aa16.57■□□□□ 0.24
SMARCA2-214ENST00000450198 KANK3Q6NY19 840 aa16.57■□□□□ 0.24
SMARCA2-214ENST00000450198 FAM135AQ9P2D6 1515 aa16.57■□□□□ 0.24
SMARCA2-214ENST00000450198 DPY19L2Q6NUT2 758 aa16.57■□□□□ 0.24
SMARCA2-214ENST00000450198 SCAND2PQ9GZW5 306 aaPredicted RBP16.57■□□□□ 0.24
SMARCA2-214ENST00000450198 NSFL1CQ9UNZ2 370 aaKnown RBP16.57■□□□□ 0.24
SMARCA2-214ENST00000450198 MAP3K11Q16584 847 aa16.57■□□□□ 0.24
SMARCA2-214ENST00000450198 SPOUT1Q5T280 376 aaKnown RBP16.57■□□□□ 0.24
SMARCA2-214ENST00000450198 ESR2Q92731 530 aa16.57■□□□□ 0.24
SMARCA2-214ENST00000450198 KIAA1107Q9UPP5 1409 aa16.57■□□□□ 0.24
SMARCA2-214ENST00000450198 BACH1O14867 736 aa16.57■□□□□ 0.24
SMARCA2-214ENST00000450198 KMT5BQ4FZB7 885 aa16.57■□□□□ 0.24
SMARCA2-214ENST00000450198 NCOA7Q8NI08 942 aa16.57■□□□□ 0.24
SMARCA2-214ENST00000450198 NUP88Q99567 741 aaPredicted RBP16.57■□□□□ 0.24
SMARCA2-214ENST00000450198 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.57■□□□□ 0.241e-6■■■■□ 21.7
SMARCA2-214ENST00000450198 TRAK2O60296 914 aa16.56■□□□□ 0.24
SMARCA2-214ENST00000450198 BMP15O95972 392 aa16.56■□□□□ 0.24
SMARCA2-214ENST00000450198 M0QZ92 97 aa16.56■□□□□ 0.24
SMARCA2-214ENST00000450198 PRPF31Q8WWY3 499 aaKnown RBP16.56■□□□□ 0.24
SMARCA2-214ENST00000450198 CEP83Q9Y592 693 aa16.56■□□□□ 0.24
SMARCA2-214ENST00000450198 MAP3K2Q9Y2U5 619 aa16.56■□□□□ 0.24
SMARCA2-214ENST00000450198 GOLIM4O00461 696 aa16.56■□□□□ 0.24
SMARCA2-214ENST00000450198 SLC4A8Q2Y0W8 1093 aa16.56■□□□□ 0.24
SMARCA2-214ENST00000450198 CNNM2Q9H8M5 875 aa16.56■□□□□ 0.24
SMARCA2-214ENST00000450198 EXOC1Q9NV70 894 aa16.56■□□□□ 0.24
SMARCA2-214ENST00000450198 NSD3Q9BZ95 1437 aa16.56■□□□□ 0.24
SMARCA2-214ENST00000450198 SNAPC4Q5SXM2 1469 aa16.55■□□□□ 0.24
SMARCA2-214ENST00000450198 ZFYP08048 801 aaPredicted RBP16.55■□□□□ 0.24
SMARCA2-214ENST00000450198 IL2RBP14784 551 aa16.55■□□□□ 0.24
SMARCA2-214ENST00000450198 NME9Q86XW9 330 aa16.55■□□□□ 0.24
SMARCA2-214ENST00000450198 EVI5LQ96CN4 794 aa16.55■□□□□ 0.24
SMARCA2-214ENST00000450198 CCDC87Q9NVE4 849 aa16.55■□□□□ 0.24
SMARCA2-214ENST00000450198 ATP5J2-PTCD1G3V325 749 aa16.55■□□□□ 0.24
SMARCA2-214ENST00000450198 FILIP1Q7Z7B0 1213 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms