RNA–Protein interactions for RNA: ENST00000449246.5

TRAK1-206, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-206ENST00000449246 ZNF397Q8NF99 534 aaPredicted RBP13.95□□□□□ -0.18
TRAK1-206ENST00000449246 NAP1L2Q9ULW6 460 aaPredicted RBP13.95□□□□□ -0.18
TRAK1-206ENST00000449246 KIF1BPQ96EK5 621 aa13.95□□□□□ -0.18
TRAK1-206ENST00000449246 SCAND2PQ9GZW5 306 aaPredicted RBP13.95□□□□□ -0.18
TRAK1-206ENST00000449246 TMEM51Q9NW97 253 aa13.95□□□□□ -0.18
TRAK1-206ENST00000449246 TIGD1Q96MW7 591 aa13.95□□□□□ -0.18
TRAK1-206ENST00000449246 RIMS1Q86UR5 1692 aaKnown RBP13.94□□□□□ -0.18
TRAK1-206ENST00000449246 VPS53Q5VIR6 699 aa13.94□□□□□ -0.18
TRAK1-206ENST00000449246 GTF3C6Q969F1 213 aa13.94□□□□□ -0.18
TRAK1-206ENST00000449246 DDX19AQ9NUU7 478 aaKnown RBP13.94□□□□□ -0.18
TRAK1-206ENST00000449246 TPCN1Q9ULQ1 816 aa13.94□□□□□ -0.18
TRAK1-206ENST00000449246 GNAT3A8MTJ3 354 aa13.94□□□□□ -0.18
TRAK1-206ENST00000449246 IFIT2P09913 472 aaKnown RBP13.94□□□□□ -0.18
TRAK1-206ENST00000449246 HSP90B1P14625 803 aaKnown RBP13.94□□□□□ -0.18
TRAK1-206ENST00000449246 LARP1Q6PKG0 1096 aaKnown RBP13.94□□□□□ -0.18
TRAK1-206ENST00000449246 CLASRPQ8N2M8 674 aaKnown RBP13.94□□□□□ -0.18
TRAK1-206ENST00000449246 ZRSR1Q15695 479 aaKnown RBP13.93□□□□□ -0.18
TRAK1-206ENST00000449246 RBM33Q96EV2 1170 aaKnown RBP13.93□□□□□ -0.18
TRAK1-206ENST00000449246 TAOK2Q9UL54 1235 aa13.93□□□□□ -0.18
TRAK1-206ENST00000449246 PPP6R1Q9UPN7 881 aa13.93□□□□□ -0.18
TRAK1-206ENST00000449246 PPFIA3O75145 1194 aa13.93□□□□□ -0.18
TRAK1-206ENST00000449246 FBXO38Q6PIJ6 1188 aa13.93□□□□□ -0.18
TRAK1-206ENST00000449246 PI4K2BQ8TCG2 481 aa13.93□□□□□ -0.18
TRAK1-206ENST00000449246 MORC2Q9Y6X9 1032 aaPredicted RBP13.93□□□□□ -0.18
TRAK1-206ENST00000449246 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
TRAK1-206ENST00000449246 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
TRAK1-206ENST00000449246 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
TRAK1-206ENST00000449246 KCNQ3O43525 872 aa13.93□□□□□ -0.18
TRAK1-206ENST00000449246 COL9A3Q14050 684 aaPredicted RBP13.93□□□□□ -0.18
TRAK1-206ENST00000449246 TAF7Q15545 349 aaPredicted RBP13.93□□□□□ -0.18
TRAK1-206ENST00000449246 FMNL2Q96PY5 1086 aa13.93□□□□□ -0.18
TRAK1-206ENST00000449246 CCDC69A6NI79 296 aa13.92□□□□□ -0.18
TRAK1-206ENST00000449246 BLOC1S2Q6QNY1 142 aa13.92□□□□□ -0.18
TRAK1-206ENST00000449246 HOMER1Q86YM7 354 aa13.92□□□□□ -0.18
TRAK1-206ENST00000449246 LRRC8AQ8IWT6 810 aa13.92□□□□□ -0.18
TRAK1-206ENST00000449246 LEO1Q8WVC0 666 aaPredicted RBP13.92□□□□□ -0.18
TRAK1-206ENST00000449246 ERCC4Q92889 916 aaPredicted RBP13.92□□□□□ -0.18
TRAK1-206ENST00000449246 RBM8AQ9Y5S9 174 aaKnown RBP13.92□□□□□ -0.18
TRAK1-206ENST00000449246 NPHP3Q7Z494 1330 aa13.92□□□□□ -0.18
TRAK1-206ENST00000449246 GLRX3O76003 335 aaKnown RBP13.92□□□□□ -0.18
TRAK1-206ENST00000449246 POLR3GO15318 223 aaPredicted RBP13.91□□□□□ -0.18
TRAK1-206ENST00000449246 USP6P35125 1406 aa13.91□□□□□ -0.18
TRAK1-206ENST00000449246 PLEKHG3A1L390 1219 aa13.91□□□□□ -0.18
TRAK1-206ENST00000449246 PI4KAP2A4QPH2 592 aa13.91□□□□□ -0.18
TRAK1-206ENST00000449246 HTATSF1O43719 755 aaKnown RBP13.91□□□□□ -0.18
TRAK1-206ENST00000449246 AEBP2Q6ZN18 517 aaPredicted RBP13.91□□□□□ -0.18
TRAK1-206ENST00000449246 PLA2G4DQ86XP0 818 aa13.91□□□□□ -0.18
TRAK1-206ENST00000449246 PI4KAP1Q8N8J0 262 aa13.91□□□□□ -0.18
TRAK1-206ENST00000449246 NOL10Q9BSC4 688 aaKnown RBP13.91□□□□□ -0.18
TRAK1-206ENST00000449246 CLSTN2Q9H4D0 955 aa13.91□□□□□ -0.18
TRAK1-206ENST00000449246 PA2G4Q9UQ80 394 aaKnown RBP13.91□□□□□ -0.18
TRAK1-206ENST00000449246 OVOS2A0A0J9YW53 1432 aa13.91□□□□□ -0.18
TRAK1-206ENST00000449246 OVOS2Q6IE36 1432 aa13.91□□□□□ -0.18
TRAK1-206ENST00000449246 SYCP1Q15431 976 aa13.91□□□□□ -0.18
TRAK1-206ENST00000449246 ERCC6LQ2NKX8 1250 aa13.91□□□□□ -0.18
TRAK1-206ENST00000449246 GPATCH3Q96I76 525 aa13.91□□□□□ -0.18
TRAK1-206ENST00000449246 LGR6Q9HBX8 967 aa13.91□□□□□ -0.18
TRAK1-206ENST00000449246 SLU7O95391 586 aaKnown RBP13.9□□□□□ -0.18
TRAK1-206ENST00000449246 CHPF2Q9P2E5 772 aa13.9□□□□□ -0.18
TRAK1-206ENST00000449246 CCDC171Q6TFL3 1326 aa13.9□□□□□ -0.18
TRAK1-206ENST00000449246 CEP170BQ9Y4F5 1589 aaPredicted RBP13.9□□□□□ -0.18
TRAK1-206ENST00000449246 PSMA5P28066 241 aa13.9□□□□□ -0.18
TRAK1-206ENST00000449246 HDGFP51858 240 aaKnown RBP13.9□□□□□ -0.18
TRAK1-206ENST00000449246 IRX5P78411 483 aaPredicted RBP13.9□□□□□ -0.18
TRAK1-206ENST00000449246 CREB3L3Q68CJ9 461 aa13.9□□□□□ -0.18
TRAK1-206ENST00000449246 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.9□□□□□ -0.18
TRAK1-206ENST00000449246 SSH3Q8TE77 659 aa13.9□□□□□ -0.18
TRAK1-206ENST00000449246 FAM227BQ96M60 508 aa13.9□□□□□ -0.18
TRAK1-206ENST00000449246 ZSWIM6Q9HCJ5 1215 aa13.9□□□□□ -0.18
TRAK1-206ENST00000449246 AMOTL2Q9Y2J4 779 aa13.9□□□□□ -0.18
TRAK1-206ENST00000449246 TDRD7Q8NHU6 1098 aaKnown RBP13.89□□□□□ -0.19
TRAK1-206ENST00000449246 CALCOCO1Q9P1Z2 691 aa13.89□□□□□ -0.19
TRAK1-206ENST00000449246 PEAK1Q9H792 1746 aa13.89□□□□□ -0.19
TRAK1-206ENST00000449246 SMC2O95347 1197 aa13.89□□□□□ -0.19
TRAK1-206ENST00000449246 AACSQ86V21 672 aa13.89□□□□□ -0.19
TRAK1-206ENST00000449246 ERO1AQ96HE7 468 aa13.89□□□□□ -0.19
TRAK1-206ENST00000449246 TSPOAP1O95153 1857 aa13.89□□□□□ -0.19
TRAK1-206ENST00000449246 FLT4P35916 1363 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 AOX1Q06278 1338 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 JAK2O60674 1132 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 RNF20Q5VTR2 975 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 CCDC73Q6ZRK6 1079 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 C11orf57Q6ZUT1 292 aaPredicted RBP13.88□□□□□ -0.19
TRAK1-206ENST00000449246 FSD1Q9BTV5 496 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 C9orf78Q9NZ63 289 aaPredicted RBP13.88□□□□□ -0.19
TRAK1-206ENST00000449246 IGSF1Q8N6C5 1336 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 EPB41L2O43491 1005 aaKnown RBP13.88□□□□□ -0.19
TRAK1-206ENST00000449246 KINO60870 393 aaKnown RBP13.88□□□□□ -0.19
TRAK1-206ENST00000449246 TNNT3P45378 269 aaPredicted RBP13.88□□□□□ -0.19
TRAK1-206ENST00000449246 ST3GAL1Q11201 340 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 SNW1Q13573 536 aaKnown RBP13.88□□□□□ -0.19
TRAK1-206ENST00000449246 SYT10Q6XYQ8 523 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 ABTB2Q8N961 1025 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 SDF4Q9BRK5 362 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 HSP90AB4PQ58FF6 505 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 ZBTB9Q96C00 473 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 PGBD1Q96JS3 809 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 CHMP4AQ9BY43 222 aa13.88□□□□□ -0.19
TRAK1-206ENST00000449246 CCDC8Q9H0W5 538 aaPredicted RBP13.88□□□□□ -0.19
TRAK1-206ENST00000449246 ECHDC1Q9NTX5 307 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms