RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 TCIRG1Q13488 830 aa21.68■■□□□ 1.06
LMNA-208ENST00000448611 RILPL2Q969X0 211 aa21.68■■□□□ 1.06
LMNA-208ENST00000448611 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.68■■□□□ 1.06
LMNA-208ENST00000448611 ERC2O15083 957 aa21.68■■□□□ 1.06
LMNA-208ENST00000448611 KIF6Q6ZMV9 814 aa21.68■■□□□ 1.06
LMNA-208ENST00000448611 ZNF330Q9Y3S2 320 aaPredicted RBP21.68■■□□□ 1.06
LMNA-208ENST00000448611 REC8O95072 547 aa21.67■■□□□ 1.06
LMNA-208ENST00000448611 CHMLP26374 656 aa21.67■■□□□ 1.06
LMNA-208ENST00000448611 RBM6P78332 1123 aaKnown RBP21.67■■□□□ 1.06
LMNA-208ENST00000448611 PTPN12Q05209 780 aaKnown RBP21.67■■□□□ 1.06
LMNA-208ENST00000448611 SIL1Q9H173 461 aa21.67■■□□□ 1.06
LMNA-208ENST00000448611 KAT6BQ8WYB5 2073 aa21.67■■□□□ 1.06
LMNA-208ENST00000448611 TRIM28Q13263 835 aaKnown RBP21.67■■□□□ 1.06
LMNA-208ENST00000448611 SNX21Q969T3 373 aa21.67■■□□□ 1.06
LMNA-208ENST00000448611 IFIT2P09913 472 aaKnown RBP21.66■■□□□ 1.06
LMNA-208ENST00000448611 RXRBP28702 533 aa21.66■■□□□ 1.06
LMNA-208ENST00000448611 POTEAQ6S8J7 498 aa21.66■■□□□ 1.06
LMNA-208ENST00000448611 LMBR1LQ6UX01 489 aa21.66■■□□□ 1.06
LMNA-208ENST00000448611 AACSQ86V21 672 aa21.66■■□□□ 1.06
LMNA-208ENST00000448611 ACSBG1Q96GR2 724 aa21.66■■□□□ 1.06
LMNA-208ENST00000448611 ESYT1Q9BSJ8 1104 aa21.66■■□□□ 1.06
LMNA-208ENST00000448611 ECHDC1Q9NTX5 307 aa21.66■■□□□ 1.06
LMNA-208ENST00000448611 ZBTB1Q9Y2K1 713 aa21.66■■□□□ 1.06
LMNA-208ENST00000448611 MAP3K15Q6ZN16 1313 aa21.66■■□□□ 1.06
LMNA-208ENST00000448611 GLRX3O76003 335 aaKnown RBP21.65■■□□□ 1.06
LMNA-208ENST00000448611 EAF2Q96CJ1 260 aaPredicted RBP21.65■■□□□ 1.06
LMNA-208ENST00000448611 ONECUT3O60422 494 aaPredicted RBP21.64■■□□□ 1.05
LMNA-208ENST00000448611 RTL5Q5HYW3 569 aaPredicted RBP21.63■■□□□ 1.05
LMNA-208ENST00000448611 GIGYF2Q6Y7W6 1299 aaKnown RBP21.63■■□□□ 1.05
LMNA-208ENST00000448611 SEPT12Q8IYM1 358 aa21.63■■□□□ 1.05
LMNA-208ENST00000448611 GPATCH3Q96I76 525 aa21.63■■□□□ 1.05
LMNA-208ENST00000448611 MAP4K4O95819 1239 aaPredicted RBP21.63■■□□□ 1.05
LMNA-208ENST00000448611 HSCBQ8IWL3 235 aa21.63■■□□□ 1.05
LMNA-208ENST00000448611 IL6STP40189 918 aaPredicted RBP21.62■■□□□ 1.05
LMNA-208ENST00000448611 NBR1Q14596 966 aa21.62■■□□□ 1.05
LMNA-208ENST00000448611 CNTROBQ8N137 903 aa21.62■■□□□ 1.05
LMNA-208ENST00000448611 THSD7AQ9UPZ6 1657 aa21.61■■□□□ 1.05
LMNA-208ENST00000448611 CICQ96RK0 1608 aaPredicted RBP21.61■■□□□ 1.05
LMNA-208ENST00000448611 HLFQ16534 295 aa21.61■■□□□ 1.05
LMNA-208ENST00000448611 ANTXR1Q9H6X2 564 aa21.61■■□□□ 1.05
LMNA-208ENST00000448611 CCDC8Q9H0W5 538 aaPredicted RBP21.61■■□□□ 1.05
LMNA-208ENST00000448611 AK9Q5TCS8 1911 aa21.6■■□□□ 1.05
LMNA-208ENST00000448611 TLR7Q9NYK1 1049 aaKnown RBP21.6■■□□□ 1.05
LMNA-208ENST00000448611 LOC102724428A0A0B4J2F2 783 aa21.59■■□□□ 1.05
LMNA-208ENST00000448611 PCCAP05165 728 aaPredicted RBP21.59■■□□□ 1.05
LMNA-208ENST00000448611 SIK1P57059 783 aa21.59■■□□□ 1.05
LMNA-208ENST00000448611 RABEP1Q15276 862 aa21.59■■□□□ 1.05
LMNA-208ENST00000448611 HSP90AB3PQ58FF7 597 aa21.59■■□□□ 1.05
LMNA-208ENST00000448611 ARXQ96QS3 562 aa21.59■■□□□ 1.05
LMNA-208ENST00000448611 PALLDQ8WX93 1383 aa21.58■■□□□ 1.05
LMNA-208ENST00000448611 ERVV-1B6SEH8 477 aa21.58■■□□□ 1.04
LMNA-208ENST00000448611 KCNQ2O43526 872 aa21.58■■□□□ 1.04
LMNA-208ENST00000448611 ATP6V1AP38606 617 aa21.58■■□□□ 1.04
LMNA-208ENST00000448611 TFCP2Q12800 502 aa21.58■■□□□ 1.04
LMNA-208ENST00000448611 INTS5Q6P9B9 1019 aaKnown RBP21.58■■□□□ 1.04
LMNA-208ENST00000448611 ZBTB38Q8NAP3 1195 aaPredicted RBP21.58■■□□□ 1.04
LMNA-208ENST00000448611 SLKQ9H2G2 1235 aaPredicted RBP21.58■■□□□ 1.04
LMNA-208ENST00000448611 CHMP3Q9Y3E7 222 aa21.58■■□□□ 1.04
LMNA-208ENST00000448611 RREB1Q92766 1687 aa21.57■■□□□ 1.04
LMNA-208ENST00000448611 CD2BP2O95400 341 aaKnown RBP21.57■■□□□ 1.04
LMNA-208ENST00000448611 PLA2G12BQ9BX93 195 aa21.57■■□□□ 1.04
LMNA-208ENST00000448611 IL25Q9H293 177 aa21.57■■□□□ 1.04
LMNA-208ENST00000448611 ANKRD36CQ5JPF3 1778 aa21.57■■□□□ 1.04
LMNA-208ENST00000448611 EIF5P55010 431 aaKnown RBP21.57■■□□□ 1.04
LMNA-208ENST00000448611 ITPK1Q13572 414 aa21.57■■□□□ 1.04
LMNA-208ENST00000448611 TNNI3KQ59H18 835 aa21.57■■□□□ 1.04
LMNA-208ENST00000448611 NLRP10Q86W26 655 aa21.57■■□□□ 1.04
LMNA-208ENST00000448611 DZIP3Q86Y13 1208 aaKnown RBP21.57■■□□□ 1.04
LMNA-208ENST00000448611 CCDC87Q9NVE4 849 aa21.57■■□□□ 1.04
LMNA-208ENST00000448611 FPGT-TNNI3KV9GXZ4 949 aa21.57■■□□□ 1.04
LMNA-208ENST00000448611 ATG9AQ7Z3C6 839 aa21.56■■□□□ 1.04
LMNA-208ENST00000448611 SMARCC1Q92922 1105 aaPredicted RBP21.56■■□□□ 1.04
LMNA-208ENST00000448611 FAM89AQ96GI7 184 aa21.56■■□□□ 1.04
LMNA-208ENST00000448611 CRKLP46109 303 aaKnown RBP21.55■■□□□ 1.04
LMNA-208ENST00000448611 EVI5LQ96CN4 794 aa21.55■■□□□ 1.04
LMNA-208ENST00000448611 TBC1D2BQ9UPU7 963 aa21.55■■□□□ 1.04
LMNA-208ENST00000448611 CDHR2Q9BYE9 1310 aa21.55■■□□□ 1.04
LMNA-208ENST00000448611 EPB41L2O43491 1005 aaKnown RBP21.55■■□□□ 1.04
LMNA-208ENST00000448611 FAM182BQ5T319 152 aa21.55■■□□□ 1.04
LMNA-208ENST00000448611 ANO2Q9NQ90 1003 aa21.55■■□□□ 1.04
LMNA-208ENST00000448611 DBNLQ9UJU6 430 aaKnown RBP21.55■■□□□ 1.04
LMNA-208ENST00000448611 NUP98P52948 1817 aa21.54■■□□□ 1.04
LMNA-208ENST00000448611 SGSM2O43147 1006 aa21.54■■□□□ 1.04
LMNA-208ENST00000448611 GPTP24298 496 aa21.54■■□□□ 1.04
LMNA-208ENST00000448611 CSF1RP07333 972 aa21.53■■□□□ 1.04
LMNA-208ENST00000448611 IL15P40933 162 aaPredicted RBP21.53■■□□□ 1.04
LMNA-208ENST00000448611 SPRYD3Q8NCJ5 442 aa21.53■■□□□ 1.04
LMNA-208ENST00000448611 ZNF831Q5JPB2 1677 aa21.52■■□□□ 1.04
LMNA-208ENST00000448611 EYA2O00167 538 aa21.52■■□□□ 1.04
LMNA-208ENST00000448611 CIAO1O76071 339 aa21.52■■□□□ 1.04
LMNA-208ENST00000448611 KRT27Q7Z3Y8 459 aa21.52■■□□□ 1.04
LMNA-208ENST00000448611 ZNF34Q8IZ26 560 aa21.52■■□□□ 1.04
LMNA-208ENST00000448611 K7ELQ4 463 aaPredicted RBP21.51■■□□□ 1.03
LMNA-208ENST00000448611 NFKBIBQ15653 356 aa21.51■■□□□ 1.03
LMNA-208ENST00000448611 ZNF594Q96JF6 807 aaPredicted RBP21.51■■□□□ 1.03
LMNA-208ENST00000448611 EP400Q96L91 3159 aa21.51■■□□□ 1.03
LMNA-208ENST00000448611 BRWD3Q6RI45 1802 aa21.51■■□□□ 1.03
LMNA-208ENST00000448611 ATP5JP18859 108 aa21.51■■□□□ 1.03
LMNA-208ENST00000448611 SYNE4Q8N205 404 aa21.51■■□□□ 1.03
LMNA-208ENST00000448611 IL17RAQ96F46 866 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms