RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 TCIRG1Q13488 830 aa23■■□□□ 1.27
SEMA3D-202ENST00000444867 CYP19A1P11511 503 aaPredicted RBP23■■□□□ 1.27
SEMA3D-202ENST00000444867 FOXO4P98177 505 aa23■■□□□ 1.27
SEMA3D-202ENST00000444867 PTPN12Q05209 780 aaKnown RBP23■■□□□ 1.27
SEMA3D-202ENST00000444867 SLKQ9H2G2 1235 aaPredicted RBP23■■□□□ 1.27
SEMA3D-202ENST00000444867 PRIM1P49642 420 aaKnown RBP22.99■■□□□ 1.27
SEMA3D-202ENST00000444867 MAP3K15Q6ZN16 1313 aa22.98■■□□□ 1.27
SEMA3D-202ENST00000444867 MCCP23508 829 aa22.98■■□□□ 1.27
SEMA3D-202ENST00000444867 NFKBIBQ15653 356 aa22.98■■□□□ 1.27
SEMA3D-202ENST00000444867 JARID2Q92833 1246 aaPredicted RBP22.98■■□□□ 1.27
SEMA3D-202ENST00000444867 EAF2Q96CJ1 260 aaPredicted RBP22.98■■□□□ 1.27
SEMA3D-202ENST00000444867 K7ELQ4 463 aaPredicted RBP22.97■■□□□ 1.27
SEMA3D-202ENST00000444867 HSP90AB3PQ58FF7 597 aa22.97■■□□□ 1.27
SEMA3D-202ENST00000444867 LMBR1LQ6UX01 489 aa22.97■■□□□ 1.27
SEMA3D-202ENST00000444867 SYTL4Q96C24 671 aaPredicted RBP22.97■■□□□ 1.27
SEMA3D-202ENST00000444867 SIL1Q9H173 461 aa22.97■■□□□ 1.27
SEMA3D-202ENST00000444867 SLC4A9Q96Q91 983 aa22.97■■□□□ 1.27
SEMA3D-202ENST00000444867 RREB1Q92766 1687 aa22.96■■□□□ 1.27
SEMA3D-202ENST00000444867 IL27Q8NEV9 243 aa22.96■■□□□ 1.27
SEMA3D-202ENST00000444867 CCDC9Q9Y3X0 531 aaKnown RBP22.96■■□□□ 1.27
SEMA3D-202ENST00000444867 ANAPC15P60006 121 aa22.95■■□□□ 1.26
SEMA3D-202ENST00000444867 GIGYF2Q6Y7W6 1299 aaKnown RBP22.95■■□□□ 1.26
SEMA3D-202ENST00000444867 MARCH10Q8NA82 808 aaPredicted RBP22.95■■□□□ 1.26
SEMA3D-202ENST00000444867 KLHDC4Q8TBB5 520 aa22.95■■□□□ 1.26
SEMA3D-202ENST00000444867 EVI5LQ96CN4 794 aa22.95■■□□□ 1.26
SEMA3D-202ENST00000444867 IL17RAQ96F46 866 aa22.95■■□□□ 1.26
SEMA3D-202ENST00000444867 CHMP5Q9NZZ3 219 aa22.95■■□□□ 1.26
SEMA3D-202ENST00000444867 IL6STP40189 918 aaPredicted RBP22.94■■□□□ 1.26
SEMA3D-202ENST00000444867 C8orf37Q96NL8 207 aa22.94■■□□□ 1.26
SEMA3D-202ENST00000444867 NUP98P52948 1817 aa22.94■■□□□ 1.26
SEMA3D-202ENST00000444867 MAP4K4O95819 1239 aaPredicted RBP22.93■■□□□ 1.26
SEMA3D-202ENST00000444867 PCCAP05165 728 aaPredicted RBP22.93■■□□□ 1.26
SEMA3D-202ENST00000444867 RUFY2Q8WXA3 655 aa22.93■■□□□ 1.26
SEMA3D-202ENST00000444867 ANO2Q9NQ90 1003 aa22.93■■□□□ 1.26
SEMA3D-202ENST00000444867 ZNF330Q9Y3S2 320 aaPredicted RBP22.93■■□□□ 1.26
SEMA3D-202ENST00000444867 ZNF831Q5JPB2 1677 aa22.93■■□□□ 1.26
SEMA3D-202ENST00000444867 SGSM2O43147 1006 aa22.93■■□□□ 1.26
SEMA3D-202ENST00000444867 VPS72Q15906 364 aa22.93■■□□□ 1.26
SEMA3D-202ENST00000444867 PLA2G12BQ9BX93 195 aa22.93■■□□□ 1.26
SEMA3D-202ENST00000444867 CCDC8Q9H0W5 538 aaPredicted RBP22.93■■□□□ 1.26
SEMA3D-202ENST00000444867 ERVV-1B6SEH8 477 aa22.92■■□□□ 1.26
SEMA3D-202ENST00000444867 HIP1O00291 1037 aa22.92■■□□□ 1.26
SEMA3D-202ENST00000444867 ST18O60284 1047 aa22.92■■□□□ 1.26
SEMA3D-202ENST00000444867 TNNI3KQ59H18 835 aa22.92■■□□□ 1.26
SEMA3D-202ENST00000444867 CIZ1Q9ULV3 898 aaPredicted RBP22.92■■□□□ 1.26
SEMA3D-202ENST00000444867 FPGT-TNNI3KV9GXZ4 949 aa22.92■■□□□ 1.26
SEMA3D-202ENST00000444867 GPR108Q9NPR9 543 aa22.91■■□□□ 1.26
SEMA3D-202ENST00000444867 ZBTB1Q9Y2K1 713 aa22.91■■□□□ 1.26
SEMA3D-202ENST00000444867 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.91■■□□□ 1.26
SEMA3D-202ENST00000444867 CDHR2Q9BYE9 1310 aa22.91■■□□□ 1.26
SEMA3D-202ENST00000444867 BCL9LQ86UU0 1499 aa22.9■■□□□ 1.26
SEMA3D-202ENST00000444867 CD2BP2O95400 341 aaKnown RBP22.9■■□□□ 1.26
SEMA3D-202ENST00000444867 TFCP2Q12800 502 aa22.9■■□□□ 1.26
SEMA3D-202ENST00000444867 ZBTB38Q8NAP3 1195 aaPredicted RBP22.9■■□□□ 1.26
SEMA3D-202ENST00000444867 DIAPH3Q9NSV4 1193 aa22.9■■□□□ 1.26
SEMA3D-202ENST00000444867 FBXO3Q9UK99 471 aa22.9■■□□□ 1.26
SEMA3D-202ENST00000444867 CHMP3Q9Y3E7 222 aa22.9■■□□□ 1.26
SEMA3D-202ENST00000444867 CIAO1O76071 339 aa22.9■■□□□ 1.26
SEMA3D-202ENST00000444867 DDIT3P35638 169 aa22.9■■□□□ 1.26
SEMA3D-202ENST00000444867 IL15P40933 162 aaPredicted RBP22.9■■□□□ 1.26
SEMA3D-202ENST00000444867 SPRYD3Q8NCJ5 442 aa22.9■■□□□ 1.26
SEMA3D-202ENST00000444867 SMARCC1Q92922 1105 aaPredicted RBP22.9■■□□□ 1.26
SEMA3D-202ENST00000444867 NGLY1Q96IV0 654 aa22.9■■□□□ 1.26
SEMA3D-202ENST00000444867 MYH3P11055 1940 aa22.89■■□□□ 1.26
SEMA3D-202ENST00000444867 TLR7Q9NYK1 1049 aaKnown RBP22.89■■□□□ 1.25
SEMA3D-202ENST00000444867 ATP5JP18859 108 aa22.88■■□□□ 1.25
SEMA3D-202ENST00000444867 FNBP4Q8N3X1 1017 aaPredicted RBP22.88■■□□□ 1.25
SEMA3D-202ENST00000444867 RAD50Q92878 1312 aa22.88■■□□□ 1.25
SEMA3D-202ENST00000444867 NLRP10Q86W26 655 aa22.87■■□□□ 1.25
SEMA3D-202ENST00000444867 COL5A3P25940 1745 aaPredicted RBP22.87■■□□□ 1.25
SEMA3D-202ENST00000444867 EYA2O00167 538 aa22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 HSP90AA1P07900 732 aaKnown RBP22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 HSPA4P34932 840 aa22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 KIAA1211Q6ZU35 1233 aa22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 ATG9AQ7Z3C6 839 aa22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 ACSBG1Q96GR2 724 aa22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 CCDC87Q9NVE4 849 aa22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 DBNLQ9UJU6 430 aaKnown RBP22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 RFX7Q2KHR2 1363 aa22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 LOC102724428A0A0B4J2F2 783 aa22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 MCM2P49736 904 aa22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 SIK1P57059 783 aa22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 HLFQ16534 295 aa22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 DZIP3Q86Y13 1208 aaKnown RBP22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 ARXQ96QS3 562 aa22.86■■□□□ 1.25
SEMA3D-202ENST00000444867 AFF2P51816 1311 aa22.85■■□□□ 1.25
SEMA3D-202ENST00000444867 FRAT2O75474 233 aaPredicted RBP22.85■■□□□ 1.25
SEMA3D-202ENST00000444867 CSF1RP07333 972 aa22.85■■□□□ 1.25
SEMA3D-202ENST00000444867 ATP6V1AP38606 617 aa22.85■■□□□ 1.25
SEMA3D-202ENST00000444867 EIF5P55010 431 aaKnown RBP22.85■■□□□ 1.25
SEMA3D-202ENST00000444867 CWC27Q6UX04 472 aaKnown RBP22.85■■□□□ 1.25
SEMA3D-202ENST00000444867 LSG1Q9H089 658 aaKnown RBP22.85■■□□□ 1.25
SEMA3D-202ENST00000444867 IL25Q9H293 177 aa22.85■■□□□ 1.25
SEMA3D-202ENST00000444867 PALLDQ8WX93 1383 aa22.85■■□□□ 1.25
SEMA3D-202ENST00000444867 CCDC57Q2TAC2 916 aa22.84■■□□□ 1.25
SEMA3D-202ENST00000444867 INTS5Q6P9B9 1019 aaKnown RBP22.84■■□□□ 1.25
SEMA3D-202ENST00000444867 FAM98CQ17RN3 349 aaKnown RBP22.83■■□□□ 1.25
SEMA3D-202ENST00000444867 BOLA2Q9H3K6 86 aa22.83■■□□□ 1.25
SEMA3D-202ENST00000444867 SNRKQ9NRH2 765 aa22.83■■□□□ 1.25
SEMA3D-202ENST00000444867 THSD7AQ9UPZ6 1657 aa22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms