RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 BCORQ6W2J9 1755 aa16.06■□□□□ 0.16
CPSF4-206ENST00000441580 CYP19A1P11511 503 aaPredicted RBP16.06■□□□□ 0.16
CPSF4-206ENST00000441580 RFX5P48382 616 aaPredicted RBP16.06■□□□□ 0.16
CPSF4-206ENST00000441580 TCIRG1Q13488 830 aa16.06■□□□□ 0.16
CPSF4-206ENST00000441580 EPHA10Q5JZY3 1008 aa16.06■□□□□ 0.16
CPSF4-206ENST00000441580 SYTL4Q96C24 671 aaPredicted RBP16.06■□□□□ 0.16
CPSF4-206ENST00000441580 KIF2CQ99661 725 aa16.06■□□□□ 0.16
CPSF4-206ENST00000441580 LAMB2P55268 1798 aa16.05■□□□□ 0.16
CPSF4-206ENST00000441580 LRP5O75197 1615 aa16.05■□□□□ 0.16
CPSF4-206ENST00000441580 IL6STP40189 918 aaPredicted RBP16.05■□□□□ 0.16
CPSF4-206ENST00000441580 SMARCC1Q92922 1105 aaPredicted RBP16.05■□□□□ 0.16
CPSF4-206ENST00000441580 MYH3P11055 1940 aa16.05■□□□□ 0.16
CPSF4-206ENST00000441580 PALLDQ8WX93 1383 aa16.04■□□□□ 0.16
CPSF4-206ENST00000441580 CDHR2Q9BYE9 1310 aa16.04■□□□□ 0.16
CPSF4-206ENST00000441580 SPEF2Q9C093 1822 aa16.04■□□□□ 0.16
CPSF4-206ENST00000441580 HIP1O00291 1037 aa16.04■□□□□ 0.16
CPSF4-206ENST00000441580 SASH1O94885 1247 aa16.04■□□□□ 0.16
CPSF4-206ENST00000441580 PRIM1P49642 420 aaKnown RBP16.04■□□□□ 0.16
CPSF4-206ENST00000441580 ZNF609O15014 1411 aa16.03■□□□□ 0.16
CPSF4-206ENST00000441580 NUP98P52948 1817 aa16.03■□□□□ 0.16
CPSF4-206ENST00000441580 RAD50Q92878 1312 aa16.03■□□□□ 0.16
CPSF4-206ENST00000441580 PCCAP05165 728 aaPredicted RBP16.03■□□□□ 0.16
CPSF4-206ENST00000441580 ANAPC15P60006 121 aa16.03■□□□□ 0.16
CPSF4-206ENST00000441580 PTPN12Q05209 780 aaKnown RBP16.03■□□□□ 0.16
CPSF4-206ENST00000441580 NBR1Q14596 966 aa16.03■□□□□ 0.16
CPSF4-206ENST00000441580 GIGYF2Q6Y7W6 1299 aaKnown RBP16.03■□□□□ 0.16
CPSF4-206ENST00000441580 MARCH10Q8NA82 808 aaPredicted RBP16.03■□□□□ 0.16
CPSF4-206ENST00000441580 RUFY2Q8WXA3 655 aa16.03■□□□□ 0.16
CPSF4-206ENST00000441580 PLA2G12BQ9BX93 195 aa16.03■□□□□ 0.16
CPSF4-206ENST00000441580 SIL1Q9H173 461 aa16.03■□□□□ 0.16
CPSF4-206ENST00000441580 FBXO3Q9UK99 471 aa16.03■□□□□ 0.16
CPSF4-206ENST00000441580 ZNF330Q9Y3S2 320 aaPredicted RBP16.03■□□□□ 0.16
CPSF4-206ENST00000441580 SCN7AQ01118 1682 aa16.02■□□□□ 0.16
CPSF4-206ENST00000441580 ERVV-1B6SEH8 477 aa16.02■□□□□ 0.16
CPSF4-206ENST00000441580 K7ELQ4 463 aaPredicted RBP16.02■□□□□ 0.16
CPSF4-206ENST00000441580 ST18O60284 1047 aa16.02■□□□□ 0.16
CPSF4-206ENST00000441580 CIAO1O76071 339 aa16.02■□□□□ 0.16
CPSF4-206ENST00000441580 FOXO4P98177 505 aa16.02■□□□□ 0.16
CPSF4-206ENST00000441580 LMBR1LQ6UX01 489 aa16.02■□□□□ 0.16
CPSF4-206ENST00000441580 EVI5LQ96CN4 794 aa16.02■□□□□ 0.16
CPSF4-206ENST00000441580 C8orf37Q96NL8 207 aa16.02■□□□□ 0.16
CPSF4-206ENST00000441580 ZBTB1Q9Y2K1 713 aa16.02■□□□□ 0.16
CPSF4-206ENST00000441580 FNBP4Q8N3X1 1017 aaPredicted RBP16.01■□□□□ 0.15
CPSF4-206ENST00000441580 ZBTB38Q8NAP3 1195 aaPredicted RBP16.01■□□□□ 0.15
CPSF4-206ENST00000441580 IL17RAQ96F46 866 aa16.01■□□□□ 0.15
CPSF4-206ENST00000441580 SLC4A9Q96Q91 983 aa16.01■□□□□ 0.15
CPSF4-206ENST00000441580 SLKQ9H2G2 1235 aaPredicted RBP16.01■□□□□ 0.15
CPSF4-206ENST00000441580 ANTXR1Q9H6X2 564 aa16.01■□□□□ 0.15
CPSF4-206ENST00000441580 GPR108Q9NPR9 543 aa16.01■□□□□ 0.15
CPSF4-206ENST00000441580 ANO2Q9NQ90 1003 aa16.01■□□□□ 0.15
CPSF4-206ENST00000441580 DIAPH3Q9NSV4 1193 aa16.01■□□□□ 0.15
CPSF4-206ENST00000441580 CIZ1Q9ULV3 898 aaPredicted RBP16.01■□□□□ 0.15
CPSF4-206ENST00000441580 CHMP3Q9Y3E7 222 aa16.01■□□□□ 0.15
CPSF4-206ENST00000441580 IL15P40933 162 aaPredicted RBP16■□□□□ 0.15
CPSF4-206ENST00000441580 TNNI3KQ59H18 835 aa16■□□□□ 0.15
CPSF4-206ENST00000441580 EAF2Q96CJ1 260 aaPredicted RBP16■□□□□ 0.15
CPSF4-206ENST00000441580 NGLY1Q96IV0 654 aa16■□□□□ 0.15
CPSF4-206ENST00000441580 CCDC87Q9NVE4 849 aa16■□□□□ 0.15
CPSF4-206ENST00000441580 FPGT-TNNI3KV9GXZ4 949 aa16■□□□□ 0.15
CPSF4-206ENST00000441580 SGSM2O43147 1006 aa15.99■□□□□ 0.15
CPSF4-206ENST00000441580 KLHDC4Q8TBB5 520 aa15.99■□□□□ 0.15
CPSF4-206ENST00000441580 CHMP5Q9NZZ3 219 aa15.99■□□□□ 0.15
CPSF4-206ENST00000441580 LOC102724428A0A0B4J2F2 783 aa15.98■□□□□ 0.15
CPSF4-206ENST00000441580 SIK1P57059 783 aa15.98■□□□□ 0.15
CPSF4-206ENST00000441580 DZIP3Q86Y13 1208 aaKnown RBP15.98■□□□□ 0.15
CPSF4-206ENST00000441580 BTAF1O14981 1849 aa15.98■□□□□ 0.15
CPSF4-206ENST00000441580 KAT6BQ8WYB5 2073 aa15.98■□□□□ 0.15
CPSF4-206ENST00000441580 A0A0G2JS52 829 aa15.97■□□□□ 0.15
CPSF4-206ENST00000441580 EYA2O00167 538 aa15.97■□□□□ 0.15
CPSF4-206ENST00000441580 ATP5JP18859 108 aa15.97■□□□□ 0.15
CPSF4-206ENST00000441580 MCM2P49736 904 aa15.97■□□□□ 0.15
CPSF4-206ENST00000441580 TFCP2Q12800 502 aa15.97■□□□□ 0.15
CPSF4-206ENST00000441580 NFKBIBQ15653 356 aa15.97■□□□□ 0.15
CPSF4-206ENST00000441580 FAM98CQ17RN3 349 aaKnown RBP15.97■□□□□ 0.15
CPSF4-206ENST00000441580 KIAA1211Q6ZU35 1233 aa15.97■□□□□ 0.15
CPSF4-206ENST00000441580 NLRP10Q86W26 655 aa15.97■□□□□ 0.15
CPSF4-206ENST00000441580 TICAM2Q86XR7 235 aa15.97■□□□□ 0.15
CPSF4-206ENST00000441580 JARID2Q92833 1246 aaPredicted RBP15.97■□□□□ 0.15
CPSF4-206ENST00000441580 ACSBG1Q96GR2 724 aa15.97■□□□□ 0.15
CPSF4-206ENST00000441580 ABCC12Q96J65 1359 aa15.97■□□□□ 0.15
CPSF4-206ENST00000441580 RGL2O15211 777 aa15.96■□□□□ 0.15
CPSF4-206ENST00000441580 HSP90AA1P07900 732 aaKnown RBP15.96■□□□□ 0.15
CPSF4-206ENST00000441580 ATP6V1AP38606 617 aa15.96■□□□□ 0.15
CPSF4-206ENST00000441580 CRKLP46109 303 aaKnown RBP15.96■□□□□ 0.15
CPSF4-206ENST00000441580 EIF5P55010 431 aaKnown RBP15.96■□□□□ 0.15
CPSF4-206ENST00000441580 CCDC57Q2TAC2 916 aa15.96■□□□□ 0.15
CPSF4-206ENST00000441580 CERKQ8TCT0 537 aa15.96■□□□□ 0.15
CPSF4-206ENST00000441580 AK7Q96M32 723 aa15.96■□□□□ 0.15
CPSF4-206ENST00000441580 CCDC8Q9H0W5 538 aaPredicted RBP15.96■□□□□ 0.15
CPSF4-206ENST00000441580 TLR7Q9NYK1 1049 aaKnown RBP15.96■□□□□ 0.15
CPSF4-206ENST00000441580 ARAP2Q8WZ64 1704 aa15.96■□□□□ 0.15
CPSF4-206ENST00000441580 MAP4K4O95819 1239 aaPredicted RBP15.95■□□□□ 0.14
CPSF4-206ENST00000441580 DBNLQ9UJU6 430 aaKnown RBP15.95■□□□□ 0.14
CPSF4-206ENST00000441580 USP21Q9UK80 565 aa15.95■□□□□ 0.14
CPSF4-206ENST00000441580 CNTNAP4Q9C0A0 1308 aa15.94■□□□□ 0.14
CPSF4-206ENST00000441580 ATRNO75882 1429 aa15.94■□□□□ 0.14
CPSF4-206ENST00000441580 RIC1Q4ADV7 1423 aa15.94■□□□□ 0.14
CPSF4-206ENST00000441580 HSP90B1P14625 803 aaKnown RBP15.94■□□□□ 0.14
CPSF4-206ENST00000441580 HSPA4P34932 840 aa15.94■□□□□ 0.14
CPSF4-206ENST00000441580 CTSWP56202 376 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms