RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 TUBGCP6Q96RT7 1819 aa8.6□□□□□ -1.03
GARNL3-205ENST00000435213 C21orf2O43822 256 aa8.6□□□□□ -1.03
GARNL3-205ENST00000435213 DIAPH1O60610 1272 aaKnown RBP8.6□□□□□ -1.03
GARNL3-205ENST00000435213 PLEKHM2Q8IWE5 1019 aa8.6□□□□□ -1.03
GARNL3-205ENST00000435213 SIRT2Q8IXJ6 389 aa8.6□□□□□ -1.03
GARNL3-205ENST00000435213 NFATC2IPQ8NCF5 419 aa8.6□□□□□ -1.03
GARNL3-205ENST00000435213 GPT2Q8TD30 523 aa8.6□□□□□ -1.03
GARNL3-205ENST00000435213 STAG1Q8WVM7 1258 aa8.6□□□□□ -1.03
GARNL3-205ENST00000435213 ATAD2Q6PL18 1390 aa8.6□□□□□ -1.03
GARNL3-205ENST00000435213 NPATQ14207 1427 aa8.59□□□□□ -1.03
GARNL3-205ENST00000435213 FCHSD2O94868 740 aa8.59□□□□□ -1.03
GARNL3-205ENST00000435213 MAGEA8P43361 318 aa8.59□□□□□ -1.03
GARNL3-205ENST00000435213 MNAT1P51948 309 aa8.59□□□□□ -1.03
GARNL3-205ENST00000435213 CCDC186Q7Z3E2 898 aa8.59□□□□□ -1.03
GARNL3-205ENST00000435213 ACRBPQ8NEB7 543 aa8.59□□□□□ -1.03
GARNL3-205ENST00000435213 TATDN2Q93075 761 aa8.59□□□□□ -1.03
GARNL3-205ENST00000435213 MIEF2Q96C03 454 aa8.59□□□□□ -1.03
GARNL3-205ENST00000435213 RBBP5Q15291 538 aaKnown RBP8.59□□□□□ -1.03
GARNL3-205ENST00000435213 PDCD2Q16342 344 aaPredicted RBP8.59□□□□□ -1.03
GARNL3-205ENST00000435213 RPUSD2Q8IZ73 545 aaKnown RBP8.59□□□□□ -1.03
GARNL3-205ENST00000435213 IQUBQ8NA54 791 aa8.59□□□□□ -1.03
GARNL3-205ENST00000435213 CD163L1Q9NR16 1453 aa8.59□□□□□ -1.04
GARNL3-205ENST00000435213 PRPF40AO75400 957 aaKnown RBP8.58□□□□□ -1.04
GARNL3-205ENST00000435213 INHBEP58166 350 aa8.58□□□□□ -1.04
GARNL3-205ENST00000435213 PROCA1Q8NCQ7 364 aaPredicted RBP8.58□□□□□ -1.04
GARNL3-205ENST00000435213 API5Q9BZZ5 524 aaKnown RBP8.58□□□□□ -1.04
GARNL3-205ENST00000435213 SPATS2LQ9NUQ6 558 aaKnown RBP8.58□□□□□ -1.04
GARNL3-205ENST00000435213 VAMP4O75379 141 aa8.58□□□□□ -1.04
GARNL3-205ENST00000435213 NAP1L1P55209 391 aaKnown RBP8.58□□□□□ -1.04
GARNL3-205ENST00000435213 TRIM74Q86UV6 250 aa8.58□□□□□ -1.04
GARNL3-205ENST00000435213 TRIM73Q86UV7 250 aa8.58□□□□□ -1.04
GARNL3-205ENST00000435213 C1orf115Q9H7X2 142 aa8.58□□□□□ -1.04
GARNL3-205ENST00000435213 ABCC3O15438 1527 aa8.58□□□□□ -1.04
GARNL3-205ENST00000435213 KIF2AO00139 706 aaPredicted RBP8.58□□□□□ -1.04
GARNL3-205ENST00000435213 TTLL5Q6EMB2 1281 aa8.58□□□□□ -1.04
GARNL3-205ENST00000435213 SDR16C5Q8N3Y7 309 aa8.58□□□□□ -1.04
GARNL3-205ENST00000435213 CCDC26Q8TAB7 109 aa8.58□□□□□ -1.04
GARNL3-205ENST00000435213 DCTPP1Q9H773 170 aa8.58□□□□□ -1.04
GARNL3-205ENST00000435213 GOPCQ9HD26 462 aa8.58□□□□□ -1.04
GARNL3-205ENST00000435213 IFT57Q9NWB7 429 aa8.58□□□□□ -1.04
GARNL3-205ENST00000435213 MAP2P11137 1827 aaKnown RBP8.58□□□□□ -1.04
GARNL3-205ENST00000435213 CPP00450 1065 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 KMT5BQ4FZB7 885 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 TMEM132EQ6IEE7 984 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 LEKR1Q6ZMV7 388 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 KIAA1524Q8TCG1 905 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 CHCHD3Q9NX63 227 aaKnown RBP8.57□□□□□ -1.04
GARNL3-205ENST00000435213 TMEM63CQ9P1W3 806 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 GNAI1P63096 354 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 RBM6P78332 1123 aaKnown RBP8.57□□□□□ -1.04
GARNL3-205ENST00000435213 PSMD2Q13200 908 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 SYAP1Q96A49 352 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-205ENST00000435213 FAXDC2Q96IV6 333 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 RBM27Q9P2N5 1060 aaKnown RBP8.57□□□□□ -1.04
GARNL3-205ENST00000435213 TMCO5BA8MYB1 307 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 PKP1Q13835 747 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 GBP6Q6ZN66 633 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 TEX11Q8IYF3 940 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 RNF214Q8ND24 703 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 TRIM6Q9C030 488 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-205ENST00000435213 TTC12Q9H892 705 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-205ENST00000435213 VEZTQ9HBM0 779 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 ZDHHC9Q9Y397 364 aa8.57□□□□□ -1.04
GARNL3-205ENST00000435213 SYCE3A1L190 88 aa8.56□□□□□ -1.04
GARNL3-205ENST00000435213 GGNBP2Q9H3C7 697 aa8.56□□□□□ -1.04
GARNL3-205ENST00000435213 TSPY26PQ9H489 355 aa8.56□□□□□ -1.04
GARNL3-205ENST00000435213 CABP2Q9NPB3 220 aa8.56□□□□□ -1.04
GARNL3-205ENST00000435213 EIF3CLB5ME19 914 aaKnown RBP8.56□□□□□ -1.04
GARNL3-205ENST00000435213 RDXP35241 583 aaKnown RBP8.56□□□□□ -1.04
GARNL3-205ENST00000435213 MCM2P49736 904 aa8.56□□□□□ -1.04
GARNL3-205ENST00000435213 NFE2L2Q16236 605 aa8.56□□□□□ -1.04
GARNL3-205ENST00000435213 EIF3CQ99613 913 aaKnown RBP8.56□□□□□ -1.04
GARNL3-205ENST00000435213 MAF1Q9H063 256 aa8.56□□□□□ -1.04
GARNL3-205ENST00000435213 GNL3LQ9NVN8 582 aaKnown RBP8.56□□□□□ -1.04
GARNL3-205ENST00000435213 ATP10DQ9P241 1426 aa8.56□□□□□ -1.04
GARNL3-205ENST00000435213 PTPRMP28827 1452 aa8.56□□□□□ -1.04
GARNL3-205ENST00000435213 PES1O00541 588 aaKnown RBP8.56□□□□□ -1.04
GARNL3-205ENST00000435213 FYB1O15117 783 aa8.56□□□□□ -1.04
GARNL3-205ENST00000435213 CEBPAP49715 358 aaPredicted RBP8.56□□□□□ -1.04
GARNL3-205ENST00000435213 ARMC2Q8NEN0 867 aa8.56□□□□□ -1.04
GARNL3-205ENST00000435213 FAM107BQ9H098 131 aa8.56□□□□□ -1.04
GARNL3-205ENST00000435213 SLC24A3Q9HC58 644 aa8.56□□□□□ -1.04
GARNL3-205ENST00000435213 ST7Q9NRC1 585 aa8.56□□□□□ -1.04
GARNL3-205ENST00000435213 SGSM2O43147 1006 aa8.55□□□□□ -1.04
GARNL3-205ENST00000435213 TPD52L2O43399 206 aaKnown RBP8.55□□□□□ -1.04
GARNL3-205ENST00000435213 MYBL2P10244 700 aa8.55□□□□□ -1.04
GARNL3-205ENST00000435213 NEDD9Q14511 834 aa8.55□□□□□ -1.04
GARNL3-205ENST00000435213 EFCAB13Q8IY85 973 aa8.55□□□□□ -1.04
GARNL3-205ENST00000435213 C17orf53Q8N3J3 647 aaPredicted RBP8.55□□□□□ -1.04
GARNL3-205ENST00000435213 ZGPATQ8N5A5 531 aaKnown RBP8.55□□□□□ -1.04
GARNL3-205ENST00000435213 PSD3Q9NYI0 1048 aa8.55□□□□□ -1.04
GARNL3-205ENST00000435213 CPSF1Q10570 1443 aaKnown RBP8.55□□□□□ -1.04
GARNL3-205ENST00000435213 NUTM2DQ5VT03 806 aaPredicted RBP8.55□□□□□ -1.04
GARNL3-205ENST00000435213 CCDC30Q5VVM6 783 aa8.55□□□□□ -1.04
GARNL3-205ENST00000435213 RANBP17Q9H2T7 1088 aaKnown RBP8.55□□□□□ -1.04
GARNL3-205ENST00000435213 ICA1Q05084 483 aa8.55□□□□□ -1.04
GARNL3-205ENST00000435213 ANKRD44Q8N8A2 993 aa8.55□□□□□ -1.04
GARNL3-205ENST00000435213 PRKAR2BP31323 418 aa8.54□□□□□ -1.04
GARNL3-205ENST00000435213 ACTN2P35609 894 aa8.54□□□□□ -1.04
GARNL3-205ENST00000435213 CORO7P57737 925 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms