RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 ZPR1O75312 459 aa13.78□□□□□ -0.2
SMPD4-205ENST00000431183 TTC22Q5TAA0 569 aa13.78□□□□□ -0.2
SMPD4-205ENST00000431183 LDHAL6AQ6ZMR3 332 aa13.78□□□□□ -0.2
SMPD4-205ENST00000431183 TRPC5Q9UL62 973 aaPredicted RBP13.78□□□□□ -0.2
SMPD4-205ENST00000431183 NAP1L2Q9ULW6 460 aaPredicted RBP13.78□□□□□ -0.2
SMPD4-205ENST00000431183 CDC45O75419 566 aa13.78□□□□□ -0.2
SMPD4-205ENST00000431183 FSD1Q9BTV5 496 aa13.78□□□□□ -0.2
SMPD4-205ENST00000431183 USPL1Q5W0Q7 1092 aa13.77□□□□□ -0.2
SMPD4-205ENST00000431183 EAF2Q96CJ1 260 aaPredicted RBP13.77□□□□□ -0.2
SMPD4-205ENST00000431183 DIAPH3Q9NSV4 1193 aa13.77□□□□□ -0.2
SMPD4-205ENST00000431183 PPP1R1BQ9UD71 204 aaPredicted RBP13.77□□□□□ -0.2
SMPD4-205ENST00000431183 FRAT2O75474 233 aaPredicted RBP13.77□□□□□ -0.21
SMPD4-205ENST00000431183 AK7Q96M32 723 aa13.77□□□□□ -0.21
SMPD4-205ENST00000431183 ALS2Q96Q42 1657 aa13.77□□□□□ -0.21
SMPD4-205ENST00000431183 IFIT5Q13325 482 aaKnown RBP13.77□□□□□ -0.21
SMPD4-205ENST00000431183 TCIRG1Q13488 830 aa13.77□□□□□ -0.21
SMPD4-205ENST00000431183 FAM196AQ6ZSG2 479 aa13.77□□□□□ -0.21
SMPD4-205ENST00000431183 DBNDD2Q9BQY9 259 aa13.77□□□□□ -0.21
SMPD4-205ENST00000431183 UPF3BQ9BZI7 483 aaKnown RBP13.77□□□□□ -0.21
SMPD4-205ENST00000431183 GSE1Q14687 1217 aa13.76□□□□□ -0.21
SMPD4-205ENST00000431183 VPS72Q15906 364 aa13.76□□□□□ -0.21
SMPD4-205ENST00000431183 METTL24Q5JXM2 366 aa13.76□□□□□ -0.21
SMPD4-205ENST00000431183 SEC31BQ9NQW1 1179 aa13.76□□□□□ -0.21
SMPD4-205ENST00000431183 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
SMPD4-205ENST00000431183 RFC4P35249 363 aa13.76□□□□□ -0.21
SMPD4-205ENST00000431183 BCL11BQ9C0K0 894 aaPredicted RBP13.76□□□□□ -0.21
SMPD4-205ENST00000431183 GREM2Q9H772 168 aa13.76□□□□□ -0.21
SMPD4-205ENST00000431183 NKX1-1Q15270 411 aaPredicted RBP13.76□□□□□ -0.21
SMPD4-205ENST00000431183 SSH3Q8TE77 659 aa13.76□□□□□ -0.21
SMPD4-205ENST00000431183 TEX13AQ9BXU3 409 aaPredicted RBP13.76□□□□□ -0.21
SMPD4-205ENST00000431183 APBA3O96018 575 aa13.75□□□□□ -0.21
SMPD4-205ENST00000431183 NCAPD2Q15021 1401 aa13.75□□□□□ -0.21
SMPD4-205ENST00000431183 LINC00116Q8NCU8 138 aa13.75□□□□□ -0.21
SMPD4-205ENST00000431183 MPHOSPH8Q99549 860 aa13.75□□□□□ -0.21
SMPD4-205ENST00000431183 ATP10DQ9P241 1426 aa13.75□□□□□ -0.21
SMPD4-205ENST00000431183 SASH1O94885 1247 aa13.75□□□□□ -0.21
SMPD4-205ENST00000431183 CHMP4CQ96CF2 233 aa13.75□□□□□ -0.21
SMPD4-205ENST00000431183 CEP126Q9P2H0 1117 aa13.75□□□□□ -0.21
SMPD4-205ENST00000431183 PPFIA3O75145 1194 aa13.74□□□□□ -0.21
SMPD4-205ENST00000431183 PI16Q6UXB8 463 aa13.74□□□□□ -0.21
SMPD4-205ENST00000431183 KIAA1211Q6ZU35 1233 aa13.74□□□□□ -0.21
SMPD4-205ENST00000431183 GPATCH3Q96I76 525 aa13.74□□□□□ -0.21
SMPD4-205ENST00000431183 CDCA7Q9BWT1 371 aaPredicted RBP13.74□□□□□ -0.21
SMPD4-205ENST00000431183 HDAC5Q9UQL6 1122 aa13.74□□□□□ -0.21
SMPD4-205ENST00000431183 SUSD4Q5VX71 490 aa13.74□□□□□ -0.21
SMPD4-205ENST00000431183 KRT27Q7Z3Y8 459 aa13.74□□□□□ -0.21
SMPD4-205ENST00000431183 TFCP2L1Q9NZI6 479 aa13.74□□□□□ -0.21
SMPD4-205ENST00000431183 LTBP4Q8N2S1 1624 aa13.73□□□□□ -0.21
SMPD4-205ENST00000431183 GOLIM4O00461 696 aa13.73□□□□□ -0.21
SMPD4-205ENST00000431183 ITGA6P23229 1130 aa13.73□□□□□ -0.21
SMPD4-205ENST00000431183 BMP2KLQ5H9B9 411 aa13.73□□□□□ -0.21
SMPD4-205ENST00000431183 NBPF5PQ86XG9 351 aaPredicted RBP13.73□□□□□ -0.21
SMPD4-205ENST00000431183 TCEANC2Q96MN5 208 aa13.73□□□□□ -0.21
SMPD4-205ENST00000431183 RTCBQ9Y3I0 505 aaKnown RBP13.73□□□□□ -0.21
SMPD4-205ENST00000431183 PHLPP1O60346 1717 aa13.73□□□□□ -0.21
SMPD4-205ENST00000431183 HSP90AB4PQ58FF6 505 aa13.73□□□□□ -0.21
SMPD4-205ENST00000431183 AMIGO3Q86WK7 504 aa13.73□□□□□ -0.21
SMPD4-205ENST00000431183 MAP3K15Q6ZN16 1313 aa13.73□□□□□ -0.21
SMPD4-205ENST00000431183 PHRF1Q9P1Y6 1649 aaKnown RBP13.73□□□□□ -0.21
SMPD4-205ENST00000431183 CPA1P15085 419 aa13.72□□□□□ -0.21
SMPD4-205ENST00000431183 WASHC4Q2M389 1173 aa13.72□□□□□ -0.21
SMPD4-205ENST00000431183 GIGYF2Q6Y7W6 1299 aaKnown RBP13.72□□□□□ -0.21
SMPD4-205ENST00000431183 NLRP10Q86W26 655 aa13.72□□□□□ -0.21
SMPD4-205ENST00000431183 DDRGK1Q96HY6 314 aa13.72□□□□□ -0.21
SMPD4-205ENST00000431183 WTIPA6NIX2 430 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-205ENST00000431183 BECN1Q14457 450 aa13.72□□□□□ -0.21
SMPD4-205ENST00000431183 SLC4A8Q2Y0W8 1093 aa13.72□□□□□ -0.21
SMPD4-205ENST00000431183 SLC51AQ86UW1 340 aa13.71□□□□□ -0.21
SMPD4-205ENST00000431183 HSCBQ8IWL3 235 aa13.71□□□□□ -0.21
SMPD4-205ENST00000431183 THRAP3Q9Y2W1 955 aaKnown RBP13.71□□□□□ -0.21
SMPD4-205ENST00000431183 ADORA1P30542 326 aa13.71□□□□□ -0.21
SMPD4-205ENST00000431183 PTPN12Q05209 780 aaKnown RBP13.71□□□□□ -0.21
SMPD4-205ENST00000431183 CCDC129Q6ZRS4 1044 aa13.71□□□□□ -0.21
SMPD4-205ENST00000431183 CCDC191Q8NCU4 936 aa13.71□□□□□ -0.21
SMPD4-205ENST00000431183 KDM4AO75164 1064 aa13.71□□□□□ -0.22
SMPD4-205ENST00000431183 NFKBIBQ15653 356 aa13.71□□□□□ -0.22
SMPD4-205ENST00000431183 INTS5Q6P9B9 1019 aaKnown RBP13.71□□□□□ -0.22
SMPD4-205ENST00000431183 SMARCC1Q92922 1105 aaPredicted RBP13.71□□□□□ -0.22
SMPD4-205ENST00000431183 ECHDC1Q9NTX5 307 aa13.71□□□□□ -0.22
SMPD4-205ENST00000431183 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.7□□□□□ -0.22
SMPD4-205ENST00000431183 FBXW7Q969H0 707 aa13.7□□□□□ -0.22
SMPD4-205ENST00000431183 FAM227BQ96M60 508 aa13.7□□□□□ -0.22
SMPD4-205ENST00000431183 SETDB2Q96T68 719 aa13.7□□□□□ -0.22
SMPD4-205ENST00000431183 LRP10Q7Z4F1 713 aa13.7□□□□□ -0.22
SMPD4-205ENST00000431183 FNBP4Q8N3X1 1017 aaPredicted RBP13.7□□□□□ -0.22
SMPD4-205ENST00000431183 SEC62Q99442 399 aaKnown RBP13.7□□□□□ -0.22
SMPD4-205ENST00000431183 CNTROBQ8N137 903 aa13.7□□□□□ -0.22
SMPD4-205ENST00000431183 UTP14AQ9BVJ6 771 aaKnown RBP13.7□□□□□ -0.22
SMPD4-205ENST00000431183 ERC2O15083 957 aa13.69□□□□□ -0.22
SMPD4-205ENST00000431183 IDH1O75874 414 aaKnown RBP13.69□□□□□ -0.22
SMPD4-205ENST00000431183 VPS37DQ86XT2 251 aa13.69□□□□□ -0.22
SMPD4-205ENST00000431183 IL25Q9H293 177 aa13.69□□□□□ -0.22
SMPD4-205ENST00000431183 IBTKQ9P2D0 1353 aaPredicted RBP13.69□□□□□ -0.22
SMPD4-205ENST00000431183 ANKRD18BA2A2Z9 1011 aa13.69□□□□□ -0.22
SMPD4-205ENST00000431183 NEK4P51957 841 aa13.69□□□□□ -0.22
SMPD4-205ENST00000431183 ERFEQ4G0M1 354 aa13.69□□□□□ -0.22
SMPD4-205ENST00000431183 TTC39AQ5SRH9 613 aa13.69□□□□□ -0.22
SMPD4-205ENST00000431183 ABCF2Q9UG63 623 aa13.69□□□□□ -0.22
SMPD4-205ENST00000431183 APPP05067 770 aa13.69□□□□□ -0.22
SMPD4-205ENST00000431183 TBC1D9BQ66K14 1250 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms