RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 EPHA10Q5JZY3 1008 aa21.34■■□□□ 1.01
CHEK1-202ENST00000427383 COL24A1Q17RW2 1714 aa21.34■■□□□ 1.01
CHEK1-202ENST00000427383 CHD1LQ86WJ1 897 aa21.34■■□□□ 1.01
CHEK1-202ENST00000427383 LAMB2P55268 1798 aa21.34■■□□□ 1.01
CHEK1-202ENST00000427383 MYH3P11055 1940 aa21.33■■□□□ 1.01
CHEK1-202ENST00000427383 TXNRD1Q16881 649 aa21.33■■□□□ 1
CHEK1-202ENST00000427383 RTCBQ9Y3I0 505 aaKnown RBP21.33■■□□□ 1
CHEK1-202ENST00000427383 PCCAP05165 728 aaPredicted RBP21.32■■□□□ 1
CHEK1-202ENST00000427383 GPTP24298 496 aa21.32■■□□□ 1
CHEK1-202ENST00000427383 PDE4AP27815 886 aa21.32■■□□□ 1
CHEK1-202ENST00000427383 CLEC4GQ6UXB4 293 aa21.32■■□□□ 1
CHEK1-202ENST00000427383 JARID2Q92833 1246 aaPredicted RBP21.32■■□□□ 1
CHEK1-202ENST00000427383 TUBGCP6Q96RT7 1819 aa21.31■■□□□ 1
CHEK1-202ENST00000427383 ZBTB38Q8NAP3 1195 aaPredicted RBP21.31■■□□□ 1
CHEK1-202ENST00000427383 APBA3O96018 575 aa21.31■■□□□ 1
CHEK1-202ENST00000427383 RGS3P49796 1198 aa21.31■■□□□ 1
CHEK1-202ENST00000427383 FOXO4P98177 505 aa21.31■■□□□ 1
CHEK1-202ENST00000427383 SMIM5Q71RC9 77 aa21.31■■□□□ 1
CHEK1-202ENST00000427383 NARFQ9UHQ1 456 aa21.31■■□□□ 1
CHEK1-202ENST00000427383 DDX60Q8IY21 1712 aaKnown RBP21.3■■□□□ 1
CHEK1-202ENST00000427383 CDHR2Q9BYE9 1310 aa21.3■■□□□ 1
CHEK1-202ENST00000427383 ANKRD45Q5TZF3 282 aa21.3■■□□□ 1
CHEK1-202ENST00000427383 AK7Q96M32 723 aa21.3■■□□□ 1
CHEK1-202ENST00000427383 LNPKQ9C0E8 428 aa21.3■■□□□ 1
CHEK1-202ENST00000427383 BCL2L12Q9HB09 334 aa21.3■■□□□ 1
CHEK1-202ENST00000427383 EXOC6BQ9Y2D4 811 aa21.3■■□□□ 1
CHEK1-202ENST00000427383 ZNF652Q9Y2D9 606 aa21.3■■□□□ 1
CHEK1-202ENST00000427383 PLA2G12BQ9BX93 195 aa21.29■■□□□ 1
CHEK1-202ENST00000427383 ADRA2BP18089 450 aa21.28■■□□□ 1
CHEK1-202ENST00000427383 ILDR1Q86SU0 546 aaPredicted RBP21.28■■□□□ 1
CHEK1-202ENST00000427383 ARHGEF1Q92888 912 aaKnown RBP21.28■■□□□ 1
CHEK1-202ENST00000427383 NOP58Q9Y2X3 529 aaKnown RBP21.28■■□□□ 1
CHEK1-202ENST00000427383 PARP10Q53GL7 1025 aa21.28■■□□□ 1
CHEK1-202ENST00000427383 RTL5Q5HYW3 569 aaPredicted RBP21.28■■□□□ 1
CHEK1-202ENST00000427383 FAM89AQ96GI7 184 aa21.28■■□□□ 1
CHEK1-202ENST00000427383 USP42Q9H9J4 1324 aaKnown RBP21.27■■□□□ 1
CHEK1-202ENST00000427383 HMGB2P26583 209 aaKnown RBP21.27■■□□□ 1
CHEK1-202ENST00000427383 RFX5P48382 616 aaPredicted RBP21.26■□□□□ 0.99
CHEK1-202ENST00000427383 SRP68Q9UHB9 627 aaKnown RBP21.26■□□□□ 0.99
CHEK1-202ENST00000427383 CASZ1Q86V15 1759 aa21.26■□□□□ 0.99
CHEK1-202ENST00000427383 SSFA2P28290 1259 aa21.25■□□□□ 0.99
CHEK1-202ENST00000427383 SUSD4Q5VX71 490 aa21.25■□□□□ 0.99
CHEK1-202ENST00000427383 USPL1Q5W0Q7 1092 aa21.25■□□□□ 0.99
CHEK1-202ENST00000427383 NIP7Q9Y221 180 aaKnown RBP eCLIP21.25■□□□□ 0.99
CHEK1-202ENST00000427383 SURF6O75683 361 aaKnown RBP21.24■□□□□ 0.99
CHEK1-202ENST00000427383 NTSR2O95665 410 aa21.24■□□□□ 0.99
CHEK1-202ENST00000427383 LMBR1LQ6UX01 489 aa21.24■□□□□ 0.99
CHEK1-202ENST00000427383 SYNE4Q8N205 404 aa21.24■□□□□ 0.99
CHEK1-202ENST00000427383 TRMT112Q9UI30 125 aaKnown RBP21.24■□□□□ 0.99
CHEK1-202ENST00000427383 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.24■□□□□ 0.99
CHEK1-202ENST00000427383 RAB11FIP3O75154 756 aa21.24■□□□□ 0.99
CHEK1-202ENST00000427383 TRAPPC3LQ5T215 181 aa21.24■□□□□ 0.99
CHEK1-202ENST00000427383 LRRCC1Q9C099 1032 aa21.24■□□□□ 0.99
CHEK1-202ENST00000427383 PA2G4Q9UQ80 394 aaKnown RBP21.24■□□□□ 0.99
CHEK1-202ENST00000427383 AKT1S1Q96B36 256 aa21.23■□□□□ 0.99
CHEK1-202ENST00000427383 COPRSQ9NQ92 184 aa21.23■□□□□ 0.99
CHEK1-202ENST00000427383 SMARCA5O60264 1052 aaPredicted RBP21.22■□□□□ 0.99
CHEK1-202ENST00000427383 ZPR1O75312 459 aa21.22■□□□□ 0.99
CHEK1-202ENST00000427383 PHF14O94880 888 aa21.22■□□□□ 0.99
CHEK1-202ENST00000427383 CSF1RP07333 972 aa21.22■□□□□ 0.99
CHEK1-202ENST00000427383 PTPN12Q05209 780 aaKnown RBP21.22■□□□□ 0.99
CHEK1-202ENST00000427383 HSP90AB4PQ58FF6 505 aa21.22■□□□□ 0.99
CHEK1-202ENST00000427383 TBC1D9BQ66K14 1250 aa21.22■□□□□ 0.99
CHEK1-202ENST00000427383 SH3TC1Q8TE82 1336 aa21.22■□□□□ 0.99
CHEK1-202ENST00000427383 APBB1O00213 710 aa21.21■□□□□ 0.99
CHEK1-202ENST00000427383 RFC4P35249 363 aa21.21■□□□□ 0.99
CHEK1-202ENST00000427383 ZNF827Q17R98 1081 aa21.21■□□□□ 0.99
CHEK1-202ENST00000427383 UTP14AQ9BVJ6 771 aaKnown RBP21.21■□□□□ 0.99
CHEK1-202ENST00000427383 SALL3Q9BXA9 1300 aa21.21■□□□□ 0.99
CHEK1-202ENST00000427383 LRP5O75197 1615 aa21.21■□□□□ 0.99
CHEK1-202ENST00000427383 IRS4O14654 1257 aaPredicted RBP21.21■□□□□ 0.99
CHEK1-202ENST00000427383 QSER1Q2KHR3 1735 aa21.21■□□□□ 0.99
CHEK1-202ENST00000427383 KLHDC4Q8TBB5 520 aa21.2■□□□□ 0.98
CHEK1-202ENST00000427383 RHPN1Q8TCX5 695 aa21.2■□□□□ 0.98
CHEK1-202ENST00000427383 KIF1BPQ96EK5 621 aa21.2■□□□□ 0.98
CHEK1-202ENST00000427383 CAMKK2Q96RR4 588 aa21.2■□□□□ 0.98
CHEK1-202ENST00000427383 CTSWP56202 376 aa21.19■□□□□ 0.98
CHEK1-202ENST00000427383 PDE8AO60658 829 aa21.18■□□□□ 0.98
CHEK1-202ENST00000427383 PLEKHM2Q8IWE5 1019 aa21.18■□□□□ 0.98
CHEK1-202ENST00000427383 C16orf71Q8IYS4 520 aaPredicted RBP21.18■□□□□ 0.98
CHEK1-202ENST00000427383 OTUD7AQ8TE49 926 aaPredicted RBP21.18■□□□□ 0.98
CHEK1-202ENST00000427383 ERC1Q8IUD2 1116 aa21.18■□□□□ 0.98
CHEK1-202ENST00000427383 TTLL11Q8NHH1 800 aa21.18■□□□□ 0.98
CHEK1-202ENST00000427383 ZBTB47Q9UFB7 747 aaPredicted RBP21.18■□□□□ 0.98
CHEK1-202ENST00000427383 SASH1O94885 1247 aa21.17■□□□□ 0.98
CHEK1-202ENST00000427383 FAM161AQ3B820 660 aa21.17■□□□□ 0.98
CHEK1-202ENST00000427383 GYS1P13807 737 aa21.16■□□□□ 0.98
CHEK1-202ENST00000427383 CARMIL3Q8ND23 1372 aa21.15■□□□□ 0.98
CHEK1-202ENST00000427383 ABCC12Q96J65 1359 aa21.15■□□□□ 0.98
CHEK1-202ENST00000427383 EZH2Q15910 746 aaKnown RBP21.15■□□□□ 0.98
CHEK1-202ENST00000427383 NUTM1Q86Y26 1132 aa21.15■□□□□ 0.98
CHEK1-202ENST00000427383 SETDB2Q96T68 719 aa21.15■□□□□ 0.98
CHEK1-202ENST00000427383 SIL1Q9H173 461 aa21.15■□□□□ 0.98
CHEK1-202ENST00000427383 IL1RAPL2Q9NP60 686 aa21.15■□□□□ 0.98
CHEK1-202ENST00000427383 CHMP3Q9Y3E7 222 aa21.15■□□□□ 0.98
CHEK1-202ENST00000427383 RTL9Q8NET4 1388 aa21.15■□□□□ 0.98
CHEK1-202ENST00000427383 FAM177BA6PVY3 158 aa21.15■□□□□ 0.98
CHEK1-202ENST00000427383 EN1Q05925 392 aaPredicted RBP21.15■□□□□ 0.98
CHEK1-202ENST00000427383 OS9Q13438 667 aaPredicted RBP21.15■□□□□ 0.98
CHEK1-202ENST00000427383 OSBPL3Q9H4L5 887 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms