RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 IFNL2Q8IZJ0 200 aa15.57■□□□□ 0.08
COL12A1-205ENST00000425443 JARID2Q92833 1246 aaPredicted RBP15.57■□□□□ 0.08
COL12A1-205ENST00000425443 LSG1Q9H089 658 aaKnown RBP15.57■□□□□ 0.08
COL12A1-205ENST00000425443 KDM3BQ7LBC6 1761 aa15.57■□□□□ 0.08
COL12A1-205ENST00000425443 NPHP3Q7Z494 1330 aa15.56■□□□□ 0.08
COL12A1-205ENST00000425443 LMO7Q8WWI1 1683 aa15.56■□□□□ 0.08
COL12A1-205ENST00000425443 PIP4K2AP48426 406 aaPredicted RBP15.56■□□□□ 0.08
COL12A1-205ENST00000425443 RUFY3Q7L099 469 aa15.56■□□□□ 0.08
COL12A1-205ENST00000425443 SUCLG2Q96I99 432 aa15.56■□□□□ 0.08
COL12A1-205ENST00000425443 TTC14Q96N46 770 aa15.56■□□□□ 0.08
COL12A1-205ENST00000425443 BICC1Q9H694 974 aaKnown RBP15.56■□□□□ 0.08
COL12A1-205ENST00000425443 CCDC9Q9Y3X0 531 aaKnown RBP15.56■□□□□ 0.08
COL12A1-205ENST00000425443 PLCB2Q00722 1185 aa15.56■□□□□ 0.08
COL12A1-205ENST00000425443 COPS6Q7L5N1 327 aa15.56■□□□□ 0.08
COL12A1-205ENST00000425443 AK2P54819 239 aa15.55■□□□□ 0.08
COL12A1-205ENST00000425443 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.55■□□□□ 0.08
COL12A1-205ENST00000425443 XAGE3Q8WTP9 111 aa15.55■□□□□ 0.08
COL12A1-205ENST00000425443 MYD88Q99836 296 aa15.55■□□□□ 0.08
COL12A1-205ENST00000425443 TSPY26PQ9H489 355 aa15.55■□□□□ 0.08
COL12A1-205ENST00000425443 SLIT3O75094 1523 aa15.55■□□□□ 0.08
COL12A1-205ENST00000425443 RAD50Q92878 1312 aa15.55■□□□□ 0.08
COL12A1-205ENST00000425443 PHKG2P15735 406 aa15.55■□□□□ 0.08
COL12A1-205ENST00000425443 CASTP20810 708 aaKnown RBP15.55■□□□□ 0.08
COL12A1-205ENST00000425443 MTX1Q13505 466 aa15.55■□□□□ 0.08
COL12A1-205ENST00000425443 CCDC8Q9H0W5 538 aaPredicted RBP15.55■□□□□ 0.08
COL12A1-205ENST00000425443 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.55■□□□□ 0.08
COL12A1-205ENST00000425443 TMEM94Q12767 1356 aa15.54■□□□□ 0.08
COL12A1-205ENST00000425443 FIBPO43427 364 aa15.54■□□□□ 0.08
COL12A1-205ENST00000425443 PTMAP06454 111 aaKnown RBP15.54■□□□□ 0.08
COL12A1-205ENST00000425443 KLHDC4Q8TBB5 520 aa15.54■□□□□ 0.08
COL12A1-205ENST00000425443 ZNF496Q96IT1 587 aaPredicted RBP15.54■□□□□ 0.08
COL12A1-205ENST00000425443 TCEANC2Q96MN5 208 aa15.54■□□□□ 0.08
COL12A1-205ENST00000425443 BCCIPQ9P287 314 aaKnown RBP eCLIP15.54■□□□□ 0.08
COL12A1-205ENST00000425443 CHMP3Q9Y3E7 222 aa15.54■□□□□ 0.08
COL12A1-205ENST00000425443 CDK11BP21127 795 aaKnown RBP15.54■□□□□ 0.08
COL12A1-205ENST00000425443 PRPF40BQ6NWY9 871 aaKnown RBP15.54■□□□□ 0.08
COL12A1-205ENST00000425443 CNKSR2Q8WXI2 1034 aa15.54■□□□□ 0.08
COL12A1-205ENST00000425443 ADAMTSL3P82987 1691 aa15.53■□□□□ 0.08
COL12A1-205ENST00000425443 OVOS2A0A0G2JMS6 1433 aa15.53■□□□□ 0.08
COL12A1-205ENST00000425443 CABP4P57796 275 aa15.53■□□□□ 0.08
COL12A1-205ENST00000425443 PPP4R3BQ5MIZ7 849 aa15.53■□□□□ 0.08
COL12A1-205ENST00000425443 ZBTB22O15209 634 aa15.53■□□□□ 0.08
COL12A1-205ENST00000425443 PTH1RQ03431 593 aa15.53■□□□□ 0.08
COL12A1-205ENST00000425443 ADCK5Q3MIX3 580 aa15.53■□□□□ 0.08
COL12A1-205ENST00000425443 CCDC83Q8IWF9 413 aa15.53■□□□□ 0.08
COL12A1-205ENST00000425443 CHRM1P11229 460 aaPredicted RBP15.52■□□□□ 0.08
COL12A1-205ENST00000425443 CADPS2Q86UW7 1296 aa15.52■□□□□ 0.08
COL12A1-205ENST00000425443 EPB41L2O43491 1005 aaKnown RBP15.52■□□□□ 0.08
COL12A1-205ENST00000425443 SNRPA1P09661 255 aaKnown RBP15.52■□□□□ 0.08
COL12A1-205ENST00000425443 ANKRD13DQ6ZTN6 518 aa15.52■□□□□ 0.08
COL12A1-205ENST00000425443 JAKMIP1Q96N16 626 aaKnown RBP15.52■□□□□ 0.08
COL12A1-205ENST00000425443 RNF216Q9NWF9 866 aaPredicted RBP15.52■□□□□ 0.08
COL12A1-205ENST00000425443 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.52■□□□□ 0.08
COL12A1-205ENST00000425443 PHRF1Q9P1Y6 1649 aaKnown RBP15.52■□□□□ 0.07
COL12A1-205ENST00000425443 SYT1P21579 422 aa15.52■□□□□ 0.07
COL12A1-205ENST00000425443 EVI5LQ96CN4 794 aa15.52■□□□□ 0.07
COL12A1-205ENST00000425443 WDR33Q9C0J8 1336 aaKnown RBP15.52■□□□□ 0.07
COL12A1-205ENST00000425443 CRYBG1Q9Y4K1 1723 aa15.51■□□□□ 0.07
COL12A1-205ENST00000425443 ST3GAL1Q11201 340 aa15.51■□□□□ 0.07
COL12A1-205ENST00000425443 PDIA6Q15084 440 aa15.51■□□□□ 0.07
COL12A1-205ENST00000425443 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
COL12A1-205ENST00000425443 FMNL2Q96PY5 1086 aa15.51■□□□□ 0.07
COL12A1-205ENST00000425443 USP16Q9Y5T5 823 aa15.51■□□□□ 0.07
COL12A1-205ENST00000425443 HEG1Q9ULI3 1381 aa15.51■□□□□ 0.07
COL12A1-205ENST00000425443 VPS37CA5D8V6 355 aaPredicted RBP15.51■□□□□ 0.07
COL12A1-205ENST00000425443 IGKV5-2P06315 115 aa15.51■□□□□ 0.07
COL12A1-205ENST00000425443 NECAB1Q8N987 351 aa15.51■□□□□ 0.07
COL12A1-205ENST00000425443 BOLA2Q9H3K6 86 aa15.51■□□□□ 0.07
COL12A1-205ENST00000425443 RGPD5Q99666 1765 aa15.51■□□□□ 0.07
COL12A1-205ENST00000425443 C17orf53Q8N3J3 647 aaPredicted RBP15.5■□□□□ 0.07
COL12A1-205ENST00000425443 FSD1Q9BTV5 496 aa15.5■□□□□ 0.07
COL12A1-205ENST00000425443 CCDC39Q9UFE4 941 aa15.5■□□□□ 0.07
COL12A1-205ENST00000425443 USP25Q9UHP3 1055 aa15.5■□□□□ 0.07
COL12A1-205ENST00000425443 SMC3Q9UQE7 1217 aa15.5■□□□□ 0.07
COL12A1-205ENST00000425443 UQCRHLA0A096LP55 91 aa15.5■□□□□ 0.07
COL12A1-205ENST00000425443 NEURL1BA8MQ27 555 aa15.5■□□□□ 0.07
COL12A1-205ENST00000425443 UQCRHP07919 91 aa15.5■□□□□ 0.07
COL12A1-205ENST00000425443 ZSCAN22P10073 491 aaPredicted RBP15.5■□□□□ 0.07
COL12A1-205ENST00000425443 ZKSCAN1P17029 563 aaPredicted RBP15.5■□□□□ 0.07
COL12A1-205ENST00000425443 GCKRQ14397 625 aa15.5■□□□□ 0.07
COL12A1-205ENST00000425443 EAF2Q96CJ1 260 aaPredicted RBP15.5■□□□□ 0.07
COL12A1-205ENST00000425443 METTL22Q9BUU2 404 aaPredicted RBP15.5■□□□□ 0.07
COL12A1-205ENST00000425443 NDUFB9Q9Y6M9 179 aa15.5■□□□□ 0.07
COL12A1-205ENST00000425443 ATP5J2-PTCD1G3V325 749 aa15.49■□□□□ 0.07
COL12A1-205ENST00000425443 PTCD1O75127 700 aaKnown RBP15.49■□□□□ 0.07
COL12A1-205ENST00000425443 SASH1O94885 1247 aa15.49■□□□□ 0.07
COL12A1-205ENST00000425443 PATL2C9JE40 543 aaKnown RBP15.49■□□□□ 0.07
COL12A1-205ENST00000425443 STX6O43752 255 aa15.49■□□□□ 0.07
COL12A1-205ENST00000425443 HCLS1P14317 486 aaPredicted RBP15.49■□□□□ 0.07
COL12A1-205ENST00000425443 FERMT3Q86UX7 667 aa15.49■□□□□ 0.07
COL12A1-205ENST00000425443 KAZALD1Q96I82 304 aa15.49■□□□□ 0.07
COL12A1-205ENST00000425443 FAM227BQ96M60 508 aa15.49■□□□□ 0.07
COL12A1-205ENST00000425443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.49■□□□□ 0.07
COL12A1-205ENST00000425443 LIMCH1Q9UPQ0 1083 aa15.49■□□□□ 0.07
COL12A1-205ENST00000425443 USP42Q9H9J4 1324 aaKnown RBP15.48■□□□□ 0.07
COL12A1-205ENST00000425443 UBE3BQ7Z3V4 1068 aa15.48■□□□□ 0.07
COL12A1-205ENST00000425443 TLR7Q9NYK1 1049 aaKnown RBP15.48■□□□□ 0.07
COL12A1-205ENST00000425443 KIF1AQ12756 1690 aa15.48■□□□□ 0.07
COL12A1-205ENST00000425443 HIP1O00291 1037 aa15.48■□□□□ 0.07
COL12A1-205ENST00000425443 CYP27B1O15528 508 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms